Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g38660 Fragaria vesca HOM05D000005 ORTHO05D012870 2.5e-308 1061.2 522 100.0
FvH4_5g38540 Fragaria vesca HOM05D000005 ORTHO05D012870 5.3e-298 1026.9 522 96.9
FvH4_5g38680 Fragaria vesca HOM05D000005 ORTHO05D000012 3.3e-215 751.9 530 73.8
FAN18G3157 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.0e-212 742.7 514 73.7
FAN13G2383 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.3e-166 588.2 508 63.6
FvH4_5g38600 Fragaria vesca HOM05D000005 ORTHO05D012870 1.0e-155 554.3 532 57.7
FvH4_5g38561 Fragaria vesca HOM05D000005 ORTHO05D000012 6.7e-152 541.6 540 55.6
FAN04G2291 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.9e-147 526.2 539 54.2
FvH4_5g38760 Fragaria vesca HOM05D000005 ORTHO05D012870 9.1e-141 504.6 516 54.7
FAN04G1101 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.7e-140 503.1 477 58.1
RcHm_v2.0_Chr7g0240681 Rosa chinensis HOM05D000005 ORTHO05D012870 1.8e-133 480.3 503 56.7
RcHm_v2.0_Chr7g0240641 Rosa chinensis HOM05D000005 ORTHO05D012870 3.0e-115 419.9 536 47.4
FAN04G0285 Fragaria x ananassa HOM05D000005 ORTHO05D012870 1.2e-113 414.5 379 59.9
FAN04G2194 Fragaria x ananassa HOM05D000005 ORTHO05D012870 1.2e-113 414.5 538 46.5
FAN18G3744 Fragaria x ananassa HOM05D000005 ORTHO05D012870 3.0e-107 393.3 524 46.2
FvH4_5g38620 Fragaria vesca HOM05D000005 ORTHO05D012870 5.8e-79 299.3 182 81.3
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 4.9e-78 296.2 353 50.7
MD17G1192900 Malus domestica HOM05D000005 ORTHO05D000012 1.8e-72 277.7 556 34.4
RcHm_v2.0_Chr7g0240591 Rosa chinensis HOM05D000005 ORTHO05D012870 3.8e-70 270.0 224 63.8
FvH4_5g38630 Fragaria vesca HOM05D000005 ORTHO05D012870 1.1e-69 268.5 277 53.8
RcHm_v2.0_Chr7g0223661 Rosa chinensis HOM05D000005 ORTHO05D000012 2.2e-57 227.6 557 32.7
Prupe.8G005400 Prunus persica HOM05D000005 ORTHO05D000012 1.1e-53 215.3 566 32.3
FvH4_2g02050 Fragaria vesca HOM05D000005 ORTHO05D000012 2.5e-53 214.2 547 31.8
FAN15G3532 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.1e-52 211.1 551 31.4
MD05G1002200 Malus domestica HOM05D000005 ORTHO05D010574 3.6e-52 210.3 434 35.0
FAN04G1890 Fragaria x ananassa HOM05D000005 ORTHO05D012870 1.4e-45 188.3 362 37.8
FAN06G4743 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.0e-39 167.9 531 29.0
FAN18G1641 Fragaria x ananassa HOM05D000005 ORTHO05D012870 4.5e-39 166.8 153 59.5
MD05G1002400 Malus domestica HOM05D000005 ORTHO05D012870 9.7e-34 149.1 299 34.1
FvH4_5g38551 Fragaria vesca HOM05D000005 ORTHO05D012870 3.6e-28 130.6 177 42.9
FvH4_5g38500 Fragaria vesca HOM05D000005 ORTHO05D012870 1.2e-23 115.5 135 49.6
FAN04G1784 Fragaria x ananassa HOM05D000005 ORTHO05D012870 8.5e-22 109.4 163 42.3
Cfa018270 Carpinus fangiana HOM05D000005 ORTHO05D010574 4.9e-17 93.6 566 22.1
CsaV3_5G039730 Cucumis sativus L. HOM05D000005 ORTHO05D014598 4.9e-17 93.6 445 22.7
FAN04G1898 Fragaria x ananassa HOM05D000005 ORTHO05D012870 4.9e-17 93.6 153 37.3
MELO3C022148.2 Cucumis melo HOM05D000005 ORTHO05D014598 3.1e-16 90.9 575 22.1
MELO3C022150.2 Cucumis melo HOM05D000005 ORTHO05D014598 5.4e-16 90.1 453 22.3
Sed0009572 Sechium edule HOM05D000005 ORTHO05D014598 9.1e-16 89.4 437 23.8
Haze_17813 Corylus avellana HOM05D000005 ORTHO05D010574 1.0e-14 85.9 438 25.1
Haze_17817 Corylus avellana HOM05D000005 ORTHO05D010574 1.3e-14 85.5 440 22.7
Prupe.7G065400 Prunus persica HOM05D000005 ORTHO05D000012 1.7e-14 85.1 563 23.1
Sed0026450 Sechium edule HOM05D000005 ORTHO05D014598 1.7e-14 85.1 448 22.1
QL05p082212 Quercus lobata HOM05D000005 ORTHO05D010574 1.9e-13 81.6 417 22.8
CsaV3_5G039660 Cucumis sativus L. HOM05D000005 ORTHO05D019022 2.1e-12 78.2 308 22.7
MELO3C022144.2 Cucumis melo HOM05D000005 ORTHO05D019022 3.6e-12 77.4 308 22.4
Cfa011656 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.0e-11 75.9 196 31.1
Haze_17731 Corylus avellana HOM05D000005 ORTHO05D010574 2.3e-11 74.7 375 23.2
FAN04G0619 Fragaria x ananassa HOM05D000005 ORTHO05D001748 5.2e-11 73.6 79 55.7
ClCG08G001380 Citrullus lanatus HOM05D000005 ORTHO05D014598 1.5e-10 72.0 344 22.4
MELO3C025516.2 Cucumis melo HOM05D000005 ORTHO05D014598 2.0e-10 71.6 485 21.0
Sed0017103 Sechium edule HOM05D000005 ORTHO05D019022 2.0e-10 71.6 194 27.3
CANSAT01G0874 Cannabis sativa HOM05D000005 ORTHO05D000012 3.4e-10 70.9 397 22.4
ClCG08G001350 Citrullus lanatus HOM05D000005 ORTHO05D014598 1.3e-09 68.9 327 22.6
CsaV3_5G039740 Cucumis sativus L. HOM05D000005 ORTHO05D014598 1.7e-09 68.6 328 23.8
Cfa008053 Carpinus fangiana HOM05D000005 ORTHO05D010574 3.2e-08 64.3 145 35.2
ClCG08G001340 Citrullus lanatus HOM05D000005 ORTHO05D014598 4.1e-08 63.9 257 23.7
Sed0004955 Sechium edule HOM05D000005 ORTHO05D019022 5.4e-08 63.5 281 23.8
Sed0026698 Sechium edule HOM05D000005 ORTHO05D019022 7.0e-08 63.2 286 25.5
MD12G1068700 Malus domestica HOM05D000005 ORTHO05D010574 1.2e-07 62.4 363 24.5
QL09p003267 Quercus lobata HOM05D000005 ORTHO05D010574 4.6e-07 60.5 366 22.1
QL09p004694 Quercus lobata HOM05D000005 ORTHO05D010574 4.6e-07 60.5 301 23.3
RcHm_v2.0_Chr4g0429701 Rosa chinensis HOM05D000005 ORTHO05D000012 7.8e-07 59.7 353 23.5
Sed0011506 Sechium edule HOM05D000005 ORTHO05D019022 5.0e-06 57.0 290 23.1
CsaV3_5G039720 Cucumis sativus L. HOM05D006294 ORTHO05D007668 6.6e-06 56.6 129 30.2


User provided reference genes

Program Settings