Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g38630 Fragaria vesca HOM05D000005 ORTHO05D012870 2.0e-166 589.0 282 100.0
FvH4_5g38760 Fragaria vesca HOM05D000005 ORTHO05D012870 3.8e-157 558.1 274 97.1
RcHm_v2.0_Chr7g0240681 Rosa chinensis HOM05D000005 ORTHO05D012870 2.5e-76 289.7 281 56.2
FvH4_5g38561 Fragaria vesca HOM05D000005 ORTHO05D000012 9.5e-76 287.7 274 55.5
FvH4_5g38600 Fragaria vesca HOM05D000005 ORTHO05D012870 8.0e-75 284.6 276 55.4
FAN04G1101 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.3e-74 283.1 275 55.6
FAN13G2383 Fragaria x ananassa HOM05D000005 ORTHO05D000012 5.2e-74 282.0 273 55.7
FAN04G2291 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.6e-73 279.6 274 53.6
FvH4_5g38540 Fragaria vesca HOM05D000005 ORTHO05D012870 1.1e-71 274.2 274 54.4
FvH4_5g38660 Fragaria vesca HOM05D000005 ORTHO05D012870 1.2e-70 270.8 277 53.8
FvH4_5g38680 Fragaria vesca HOM05D000005 ORTHO05D000012 1.4e-63 247.3 265 52.5
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 5.4e-55 218.8 284 44.4
FAN18G3157 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.7e-54 216.5 281 45.9
RcHm_v2.0_Chr7g0240641 Rosa chinensis HOM05D000005 ORTHO05D012870 3.0e-53 213.0 274 44.5
FAN18G3744 Fragaria x ananassa HOM05D000005 ORTHO05D012870 1.2e-51 207.6 282 42.2
RcHm_v2.0_Chr7g0240591 Rosa chinensis HOM05D000005 ORTHO05D012870 4.0e-50 202.6 197 52.8
FAN04G2194 Fragaria x ananassa HOM05D000005 ORTHO05D012870 5.8e-49 198.7 282 40.4
FAN04G0285 Fragaria x ananassa HOM05D000005 ORTHO05D012870 9.2e-47 191.4 227 51.5
MD17G1192900 Malus domestica HOM05D000005 ORTHO05D000012 7.6e-33 145.2 266 36.8
RcHm_v2.0_Chr7g0223661 Rosa chinensis HOM05D000005 ORTHO05D000012 2.1e-30 137.1 264 35.6
MD05G1002200 Malus domestica HOM05D000005 ORTHO05D010574 2.8e-27 126.7 226 34.1
FAN18G1641 Fragaria x ananassa HOM05D000005 ORTHO05D012870 5.3e-26 122.5 222 34.7
Prupe.8G005400 Prunus persica HOM05D000005 ORTHO05D000012 1.0e-21 108.2 281 32.0
FAN15G3532 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.3e-21 107.8 264 33.0
FvH4_2g02050 Fragaria vesca HOM05D000005 ORTHO05D000012 3.9e-21 106.3 261 32.2
FAN06G4743 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.1e-14 84.0 250 28.4
MD05G1002400 Malus domestica HOM05D000005 ORTHO05D012870 2.5e-12 77.0 127 38.6
Cfa011656 Carpinus fangiana HOM05D000005 ORTHO05D010574 1.3e-11 74.7 223 28.3
MD12G1068700 Malus domestica HOM05D000005 ORTHO05D010574 4.8e-11 72.8 187 29.9
Prupe.7G065400 Prunus persica HOM05D000005 ORTHO05D000012 1.1e-10 71.6 194 29.9
FAN04G1898 Fragaria x ananassa HOM05D000005 ORTHO05D012870 1.8e-10 70.9 169 30.2
Cfa011658 Carpinus fangiana HOM05D000005 ORTHO05D010574 2.0e-09 67.4 160 31.2
Cfa008053 Carpinus fangiana HOM05D000005 ORTHO05D010574 3.4e-09 66.6 172 30.8
QL05p082212 Quercus lobata HOM05D000005 ORTHO05D010574 1.0e-08 65.1 225 27.1
MELO3C022148.2 Cucumis melo HOM05D000005 ORTHO05D014598 2.2e-08 63.9 194 28.9
Sed0026450 Sechium edule HOM05D000005 ORTHO05D014598 2.9e-08 63.5 212 26.4
QL04p027965 Quercus lobata HOM05D000005 ORTHO05D010574 6.5e-08 62.4 168 30.4
Prupe.7G065500 Prunus persica HOM05D000005 ORTHO05D010574 8.4e-08 62.0 219 27.9
QL04p027472 Quercus lobata HOM05D000005 ORTHO05D010574 1.4e-07 61.2 198 23.2
FAN04G1890 Fragaria x ananassa HOM05D000005 ORTHO05D012870 2.5e-07 60.5 146 34.2
Sed0017103 Sechium edule HOM05D000005 ORTHO05D019022 2.5e-07 60.5 203 24.6
Sed0009572 Sechium edule HOM05D000005 ORTHO05D014598 4.2e-07 59.7 191 28.3
ClCG08G001350 Citrullus lanatus HOM05D000005 ORTHO05D014598 9.3e-07 58.5 199 29.1
MELO3C022144.2 Cucumis melo HOM05D000005 ORTHO05D019022 9.3e-07 58.5 204 21.6
Sed0004955 Sechium edule HOM05D000005 ORTHO05D019022 9.3e-07 58.5 192 23.4
Haze_17730 Corylus avellana HOM05D000005 ORTHO05D010574 1.2e-06 58.2 190 24.2
Haze_17813 Corylus avellana HOM05D000005 ORTHO05D010574 1.6e-06 57.8 196 26.5
RcHm_v2.0_Chr1g0342551 Rosa chinensis HOM05D000005 ORTHO05D010574 2.1e-06 57.4 133 27.8
Cfa011655 Carpinus fangiana HOM05D000005 ORTHO05D010574 4.6e-06 56.2 150 30.0
CANSAT01G0874 Cannabis sativa HOM05D000005 ORTHO05D000012 7.9e-06 55.5 249 23.3
CsaV3_5G039740 Cucumis sativus L. HOM05D000005 ORTHO05D014598 7.9e-06 55.5 183 23.5


User provided reference genes

Program Settings