Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g37821 Fragaria vesca HOM05D000608 ORTHO05D046238 6.0e-49 197.2 100 100.0
FAN07G1315 Fragaria x ananassa HOM05D000608 ORTHO05D046238 4.8e-30 134.4 88 77.3
FvH4_4g26790 Fragaria vesca HOM05D000608 ORTHO05D000444 2.4e-29 132.1 83 79.5
FAN12G2096 Fragaria x ananassa HOM05D000608 ORTHO05D000444 2.4e-29 132.1 83 79.5
FAN12G2817 Fragaria x ananassa HOM05D000608 ORTHO05D000444 2.4e-29 132.1 83 79.5
FAN17G2764 Fragaria x ananassa HOM05D000608 ORTHO05D000444 1.5e-28 129.4 83 77.1
FAN22G0024 Fragaria x ananassa HOM05D000608 ORTHO05D000444 4.4e-28 127.9 83 77.1
FAN07G1341 Fragaria x ananassa HOM05D000608 ORTHO05D000444 1.3e-27 126.3 84 77.4
Prupe.1G316100 Prunus persica HOM05D000608 ORTHO05D000444 2.0e-20 102.4 83 71.1
RcHm_v2.0_Chr4g0434471 Rosa chinensis HOM05D000608 ORTHO05D000444 4.5e-20 101.3 81 69.1
MD16G1037700 Malus domestica HOM05D000608 ORTHO05D000444 1.9e-18 95.9 83 66.3
MD13G1035700 Malus domestica HOM05D000608 ORTHO05D000444 1.3e-16 89.7 83 62.7
CiPaw.05G241200 Carya illinoinensis HOM05D000608 ORTHO05D000444 1.1e-15 86.7 86 60.5
Cpa.g.sc65.61 Carica papaya HOM05D000608 ORTHO05D000444 3.7e-14 81.6 83 56.6
QL01p010862 Quercus lobata HOM05D000608 ORTHO05D000444 6.9e-13 77.4 75 58.7
Haze_00647 Corylus avellana HOM05D000608 ORTHO05D000444 2.0e-12 75.9 83 55.4
Dinv31601 Davidia involucrata HOM05D000608 ORTHO05D000444 4.5e-12 74.7 86 52.3
Thecc.02G223100 Theobroma cacao HOM05D000608 ORTHO05D000444 8.4e-11 70.5 83 48.2
Manes.06G065300 Manihot esculenta HOM05D000608 ORTHO05D000444 5.5e-10 67.8 86 51.2
CANSAT01G0733 Cannabis sativa HOM05D000608 ORTHO05D000444 2.7e-09 65.5 89 49.4
Gohir.D02G171750 Gossypium hirsutum HOM05D000608 ORTHO05D000444 2.7e-09 65.5 82 48.8
Gorai.002G075400 Gossypium raimondii HOM05D000608 ORTHO05D000444 2.7e-09 65.5 82 48.8
Gorai.005G193200 Gossypium raimondii HOM05D000608 ORTHO05D000444 2.7e-09 65.5 82 48.8
CSS0011183 Camellia sinensis var. sinensis HOM05D000608 ORTHO05D000444 4.6e-09 64.7 82 52.4
Gohir.A01G127400 Gossypium hirsutum HOM05D000608 ORTHO05D000444 1.0e-08 63.5 83 48.2
vmacro10598 Vaccinium macrocarpon HOM05D000608 ORTHO05D000444 1.8e-08 62.8 84 46.4
TWI31G1419 Tripterygium wilfordii HOM05D000608 ORTHO05D000444 5.1e-08 61.2 83 50.6
Gorai.002G139500 Gossypium raimondii HOM05D000608 ORTHO05D000444 8.7e-08 60.5 83 48.2
Gohir.D01G114400 Gossypium hirsutum HOM05D000608 ORTHO05D000444 1.1e-07 60.1 83 48.2
Lj3A880T119 Lonicera japonica HOM05D000608 ORTHO05D000444 1.1e-07 60.1 86 45.3
Actinidia38366 Actinidia chinensis HOM05D000608 ORTHO05D000444 1.5e-07 59.7 87 46.0
Ciclev10015520m.g Citrus clementina HOM05D000608 ORTHO05D000444 2.5e-07 58.9 81 49.4
Glyma.10G271100 Glycine max HOM05D000608 ORTHO05D000444 2.5e-07 58.9 90 43.3
arahy.Tifrunner.gnm1.ann1.N5UVUF Arachis hypogaea HOM05D000608 ORTHO05D000444 4.3e-07 58.2 90 42.2
Cfa015844 Carpinus fangiana HOM05D000608 ORTHO05D000444 4.3e-07 58.2 85 48.2
Rhsim09G0104100 Rhododendron simsii HOM05D000608 ORTHO05D000444 5.7e-07 57.8 83 44.6
TWI79G1644 Tripterygium wilfordii HOM05D000608 ORTHO05D000444 1.3e-06 56.6 83 49.4
arahy.Tifrunner.gnm1.ann1.GYJH8K Arachis hypogaea HOM05D000608 ORTHO05D000444 2.1e-06 55.8 90 41.1
TPR.G4916 Trifolium pratense HOM05D000608 ORTHO05D000444 2.1e-06 55.8 85 41.2
MELO3C005342.2 Cucumis melo HOM05D000608 ORTHO05D000444 2.8e-06 55.5 85 47.1
Lsat_1_v5_gn_8_41320 Lactuca sativa HOM05D000608 ORTHO05D000444 2.8e-06 55.5 65 55.4
Lj6A753T57 Lonicera japonica HOM05D000608 ORTHO05D000444 2.8e-06 55.5 84 42.9
DCAR_007261 Daucus carota HOM05D000608 ORTHO05D000444 4.8e-06 54.7 83 43.4
Lsat_1_v5_gn_3_61660 Lactuca sativa HOM05D000608 ORTHO05D000444 6.2e-06 54.3 88 44.3
Medtr1g110070 Medicago truncatula HOM05D000608 ORTHO05D000444 6.2e-06 54.3 84 41.7
TAR371G0302 Trochodendron aralioides HOM05D000608 ORTHO05D000444 6.2e-06 54.3 84 44.0
THA.LOC104823937 Tarenaya hassleriana HOM05D000608 ORTHO05D000444 8.2e-06 53.9 93 44.1


User provided reference genes

Program Settings