Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g37241 Fragaria vesca HOM05D000097 ORTHO05D009232 1.0e-102 376.7 187 100.0
FAN08G2838 Fragaria x ananassa HOM05D000097 ORTHO05D009232 8.2e-76 287.3 190 80.5
RcHm_v2.0_Chr7g0230661 Rosa chinensis HOM05D000097 ORTHO05D000041 1.7e-17 93.6 184 40.2
FvH4_5g37185 Fragaria vesca HOM05D000097 ORTHO05D009232 1.9e-16 90.1 148 43.2
RcHm_v2.0_Chr7g0214651 Rosa chinensis HOM05D000097 ORTHO05D009232 1.4e-14 84.0 177 40.7
FAN04G0188 Fragaria x ananassa HOM05D000097 ORTHO05D009232 2.3e-14 83.2 195 33.8
MD17G1100900 Malus domestica HOM05D000097 ORTHO05D009232 2.3e-14 83.2 142 35.2
FAN13G2188 Fragaria x ananassa HOM05D000097 ORTHO05D009232 1.2e-13 80.9 195 33.8
MD17G1101100 Malus domestica HOM05D000097 ORTHO05D000041 1.7e-12 77.0 148 35.1
FAN08G2145 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.2e-12 76.6 197 34.5
FvH4_5g35840 Fragaria vesca HOM05D000097 ORTHO05D000041 6.4e-12 75.1 72 52.8
FAN13G3280 Fragaria x ananassa HOM05D000097 ORTHO05D000041 6.4e-12 75.1 148 38.5
FAN18G1661 Fragaria x ananassa HOM05D000097 ORTHO05D000041 6.4e-12 75.1 72 52.8
RcHm_v2.0_Chr7g0230781 Rosa chinensis HOM05D000097 ORTHO05D009232 2.7e-10 69.7 137 33.6
Prupe.2G082900 Prunus persica HOM05D000097 ORTHO05D000041 4.6e-10 68.9 104 40.4
CiPaw.13G052500 Carya illinoinensis HOM05D000097 ORTHO05D000041 1.7e-09 67.0 145 31.0
FAN14G1826 Fragaria x ananassa HOM05D000097 ORTHO05D009232 1.7e-09 67.0 144 34.0
FAN04G1606 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.0e-09 66.2 67 52.2
FAN04G1975 Fragaria x ananassa HOM05D001790 ORTHO05D007425 3.0e-09 66.2 67 52.2
RcHm_v2.0_Chr1g0338991 Rosa chinensis HOM05D000097 ORTHO05D000041 6.6e-09 65.1 66 51.5
FvH4_6g44572 Fragaria vesca HOM05D000097 ORTHO05D009232 1.1e-08 64.3 71 47.9
Prupe.2G080300 Prunus persica HOM05D000097 ORTHO05D000041 1.5e-08 63.9 77 48.1
FAN18G2502 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.9e-08 63.5 67 49.3
FAN04G3137 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.5e-08 63.2 64 53.1
MD09G1088100 Malus domestica HOM05D000097 ORTHO05D000041 2.5e-08 63.2 64 48.4
FvH4_5g37090 Fragaria vesca HOM05D000097 ORTHO05D009232 3.3e-08 62.8 66 50.0
CiPaw.01G097000 Carya illinoinensis HOM05D000097 ORTHO05D000041 4.3e-08 62.4 71 45.1
MD09G1086500 Malus domestica HOM05D000097 ORTHO05D000041 4.3e-08 62.4 141 34.8
FAN11G0227 Fragaria x ananassa HOM05D000097 ORTHO05D009232 5.6e-08 62.0 70 44.3
FAN16G1842 Fragaria x ananassa HOM05D000097 ORTHO05D008803 5.6e-08 62.0 79 43.0
FAN08G0420 Fragaria x ananassa HOM05D000097 ORTHO05D009232 9.6e-08 61.2 66 48.5
Prupe.2G082800 Prunus persica HOM05D000097 ORTHO05D000041 9.6e-08 61.2 99 36.4
FvH4_5g36310 Fragaria vesca HOM05D012044 ORTHO05D009232 1.2e-07 60.8 64 46.9
FvH4_5g36321 Fragaria vesca HOM05D000097 ORTHO05D009232 1.2e-07 60.8 163 35.0
Prupe.3G237500 Prunus persica HOM05D000097 ORTHO05D000041 1.2e-07 60.8 69 49.3
RcHm_v2.0_Chr7g0242551 Rosa chinensis HOM05D000097 ORTHO05D000041 1.2e-07 60.8 67 47.8
Dinv25833 Davidia involucrata HOM05D000097 ORTHO05D000041 1.6e-07 60.5 60 43.3
FAN13G1601 Fragaria x ananassa HOM05D000097 ORTHO05D000041 1.6e-07 60.5 65 47.7
Prupe.2G033800 Prunus persica HOM05D000097 ORTHO05D009232 1.6e-07 60.5 66 48.5
Prupe.2G082100 Prunus persica HOM05D000097 ORTHO05D000041 1.6e-07 60.5 67 44.8
Dinv25831 Davidia involucrata HOM05D000097 ORTHO05D009232 2.1e-07 60.1 60 45.0
FvH4_1g02950 Fragaria vesca HOM05D000097 ORTHO05D000041 2.1e-07 60.1 65 47.7
FAN14G0264 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.1e-07 60.1 141 30.5
FAN28G0864 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.1e-07 60.1 65 47.7
MD17G1077800 Malus domestica HOM05D000097 ORTHO05D000041 2.1e-07 60.1 89 38.2
MD17G1078100 Malus domestica HOM05D000097 ORTHO05D000041 2.1e-07 60.1 89 38.2
FvH4_6g45154 Fragaria vesca HOM05D000097 ORTHO05D000041 2.8e-07 59.7 130 30.0
FvH4_6g51440 Fragaria vesca HOM05D000097 ORTHO05D000041 2.8e-07 59.7 82 41.5
FAN08G2061 Fragaria x ananassa HOM05D000097 ORTHO05D009232 2.8e-07 59.7 64 48.4
FAN09G3828 Fragaria x ananassa HOM05D000442 ORTHO05D001979 2.8e-07 59.7 106 36.8
GSVIVG01011219001 Vitis vinifera HOM05D000097 ORTHO05D000041 2.8e-07 59.7 135 34.1
FAN02G3279 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.6e-07 59.3 81 39.5
FAN18G4446 Fragaria x ananassa HOM05D000097 ORTHO05D000041 3.6e-07 59.3 67 46.3
Cfa000775 Carpinus fangiana HOM05D000097 ORTHO05D009232 4.7e-07 58.9 72 40.3
CiPaw.13G052400 Carya illinoinensis HOM05D000097 ORTHO05D000041 4.7e-07 58.9 75 40.0
FvH4_6g44660 Fragaria vesca HOM05D000097 ORTHO05D000041 4.7e-07 58.9 71 42.3
FvH4_3g42220 Fragaria vesca HOM05D000097 ORTHO05D000041 6.2e-07 58.5 134 33.6
Prupe.3G237400 Prunus persica HOM05D000097 ORTHO05D009232 6.2e-07 58.5 69 46.4
Dinv41109 Davidia involucrata HOM05D000097 ORTHO05D009232 8.1e-07 58.2 88 31.8
FAN09G2628 Fragaria x ananassa HOM05D000097 ORTHO05D000041 8.1e-07 58.2 141 30.5
FAN16G3529 Fragaria x ananassa HOM05D040715 ORTHO05D035629 8.1e-07 58.2 67 49.3
FAN18G4572 Fragaria x ananassa HOM05D000097 ORTHO05D009232 8.1e-07 58.2 67 49.3
Prupe.2G080900 Prunus persica HOM05D000097 ORTHO05D000041 1.1e-06 57.8 69 40.6
RcHm_v2.0_Chr7g0243171 Rosa chinensis HOM05D012044 ORTHO05D009232 1.1e-06 57.8 100 38.0
TWI15G0201 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 1.1e-06 57.8 62 43.5
Manes.07G088800 Manihot esculenta HOM05D000097 ORTHO05D000041 1.4e-06 57.4 62 46.8
FAN11G0869 Fragaria x ananassa HOM05D000097 ORTHO05D009232 1.8e-06 57.0 66 45.5
Cfa015092 Carpinus fangiana HOM05D000097 ORTHO05D009232 2.4e-06 56.6 70 40.0
FAN14G3669 Fragaria x ananassa HOM05D000097 ORTHO05D000041 2.4e-06 56.6 82 37.8
FvH4_6g44650 Fragaria vesca HOM05D000097 ORTHO05D009232 3.1e-06 56.2 71 40.8
Manes.07G086500 Manihot esculenta HOM05D000097 ORTHO05D000041 3.1e-06 56.2 62 41.9
Prupe.2G081100 Prunus persica HOM05D000097 ORTHO05D000041 3.1e-06 56.2 70 40.0
Atru.chr4.820 Acer truncatum HOM05D000097 ORTHO05D000041 4.0e-06 55.8 107 34.6
Manes.07G087101 Manihot esculenta HOM05D000097 ORTHO05D000041 4.0e-06 55.8 62 43.5
TAR625G1425 Trochodendron aralioides HOM05D000097 ORTHO05D000041 4.0e-06 55.8 91 37.4
CiPaw.01G104800 Carya illinoinensis HOM05D000097 ORTHO05D000041 5.2e-06 55.5 69 39.1
Haze_02551 Corylus avellana HOM05D000097 ORTHO05D000041 5.2e-06 55.5 69 39.1
FAN02G1935 Fragaria x ananassa HOM05D000097 ORTHO05D000041 5.2e-06 55.5 71 40.8
FAN13G0017 Fragaria x ananassa HOM05D000097 ORTHO05D009232 5.2e-06 55.5 99 33.3
Prupe.2G081200 Prunus persica HOM05D000097 ORTHO05D000041 5.2e-06 55.5 117 29.9
RcHm_v2.0_Chr2g0161801 Rosa chinensis HOM05D000097 ORTHO05D009232 5.2e-06 55.5 68 42.6
Cfa011094 Carpinus fangiana HOM05D000097 ORTHO05D009232 6.8e-06 55.1 97 34.0
Cfa012991 Carpinus fangiana HOM05D000097 ORTHO05D009232 8.9e-06 54.7 53 49.1
MD17G1027900 Malus domestica HOM05D000097 ORTHO05D000041 8.9e-06 54.7 65 43.1
Thecc.03G016700 Theobroma cacao HOM05D000097 ORTHO05D009232 8.9e-06 54.7 62 41.9


User provided reference genes

Program Settings