Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g36190 Fragaria vesca HOM05D006059 ORTHO05D046011 7.1e-189 663.7 316 100.0
FAN18G4402 Fragaria x ananassa HOM05D006059 ORTHO05D046011 2.3e-86 323.2 157 98.1
FAN14G0698 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.4e-56 224.2 290 46.6
FAN03G3436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.1e-51 208.0 162 66.0
FAN03G0148 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.4e-51 207.6 290 45.2
FAN05G2015 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-51 207.2 162 64.8
FAN11G1312 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-51 207.2 163 65.6
FAN09G3528 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.1e-51 206.5 138 73.2
FAN16G0265 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.3e-51 205.7 163 66.3
FvH4_6g18410 Fragaria vesca HOM05D006059 ORTHO05D010613 1.2e-50 204.5 141 73.0
FAN16G3677 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.2e-50 204.5 288 44.8
FAN14G3910 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.5e-50 202.6 290 44.1
FAN02G0790 Fragaria x ananassa HOM05D006059 ORTHO05D010613 7.7e-50 201.8 163 65.0
FAN13G2239 Fragaria x ananassa HOM05D006059 ORTHO05D010613 7.7e-50 201.8 163 65.0
FAN06G3421 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-49 201.1 287 44.3
FvH4_5g18320 Fragaria vesca HOM05D006059 ORTHO05D010613 2.9e-49 199.9 290 44.1
FAN18G2462 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.9e-48 197.2 287 42.9
FAN03G2752 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.6e-47 193.0 163 63.8
FAN10G3573 Fragaria x ananassa HOM05D006059 ORTHO05D019147 1.5e-45 187.6 131 71.0
FAN14G3214 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.9e-43 178.7 139 66.9
FAN11G2691 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.4e-40 171.0 163 57.1
FAN14G1746 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.9e-40 170.6 116 71.6
FAN06G1974 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.0e-38 163.3 103 75.7
FAN21G0235 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.1e-35 153.3 113 69.0
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 2.2e-33 147.1 134 63.4
FvH4_5g09320 Fragaria vesca HOM05D006059 ORTHO05D010613 4.7e-31 139.4 95 71.6
FAN01G0864 Fragaria x ananassa HOM05D006059 ORTHO05D019147 4.7e-31 139.4 97 68.0
FAN05G3127 Fragaria x ananassa HOM05D006059 ORTHO05D208470 4.7e-31 139.4 165 50.9
FAN12G1586 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.0e-31 138.7 103 68.0
FAN06G0639 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.0e-30 136.3 235 38.3
FAN25G3455 Fragaria x ananassa HOM05D006059 ORTHO05D207604 5.7e-29 132.5 136 55.9
FAN06G2872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.1e-27 128.3 123 56.9
FAN06G4655 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-27 127.5 194 39.7
FAN12G1423 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.4e-27 127.1 137 54.7
FAN11G1542 Fragaria x ananassa HOM05D006059 ORTHO05D210510 3.1e-27 126.7 130 55.4
FAN27G2436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.1e-27 126.7 152 53.3
FvH4_3g36310 Fragaria vesca HOM05D006059 ORTHO05D000610 1.2e-26 124.8 144 52.1
FAN18G3353 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.5e-26 123.2 152 51.3
FAN18G2895 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.0e-25 121.7 107 60.7
FAN17G1384 Fragaria x ananassa HOM05D006059 ORTHO05D201010 2.9e-25 120.2 140 53.6
FvH4_6g48101 Fragaria vesca HOM05D006059 ORTHO05D198592 7.2e-24 115.5 108 59.3
FvH4_6g02080 Fragaria vesca HOM05D006059 ORTHO05D022634 8.8e-22 108.6 90 61.1
FAN02G0158 Fragaria x ananassa HOM05D006059 ORTHO05D207876 2.0e-21 107.5 162 45.7
FAN03G3178 Fragaria x ananassa HOM05D006059 ORTHO05D022634 2.6e-21 107.1 108 54.6
FAN09G3980 Fragaria x ananassa HOM05D006059 ORTHO05D022634 7.5e-21 105.5 90 60.0
FAN25G1404 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-20 104.8 136 46.3
FAN10G4265 Fragaria x ananassa HOM05D006059 ORTHO05D022634 2.2e-20 104.0 90 58.9
FvH4_5g36660 Fragaria vesca HOM05D006059 ORTHO05D010613 2.8e-20 103.6 136 46.3
FAN06G3448 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.8e-20 102.8 136 47.1
FAN05G1577 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.3e-20 102.1 136 46.3
FAN25G3073 Fragaria x ananassa HOM05D006059 ORTHO05D022634 8.3e-20 102.1 112 50.9
FAN27G3382 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.4e-19 101.3 119 51.3
FAN08G2764 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-19 100.9 136 45.6
FAN13G2711 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-19 100.9 136 46.3
FAN14G0222 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.1e-19 99.8 136 45.6
FAN24G0852 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.1e-19 99.8 135 45.2
FAN10G0384 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.1e-19 98.6 136 44.9
FAN05G4633 Fragaria x ananassa HOM05D006059 ORTHO05D003448 1.6e-18 97.8 136 45.6
FAN06G3209 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.0e-18 97.4 136 44.9
FAN09G4425 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.7e-18 97.1 77 64.9
RcHm_v2.0_Chr5g0057351 Rosa chinensis HOM05D006059 ORTHO05D010613 2.7e-18 97.1 161 44.1
FAN14G4965 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.7e-17 94.4 82 63.4
FAN06G3983 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.9e-17 93.6 79 63.3
FAN14G4872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.0e-17 92.8 136 44.1
FAN19G3119 Fragaria x ananassa HOM05D006059 ORTHO05D022634 5.0e-17 92.8 90 54.4
FAN05G3551 Fragaria x ananassa HOM05D006059 ORTHO05D202697 6.5e-17 92.4 69 63.8
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-15 86.7 99 48.5
FAN24G2449 Fragaria x ananassa HOM05D006059 ORTHO05D207803 6.1e-15 85.9 67 64.2
RcHm_v2.0_Chr7g0227101 Rosa chinensis HOM05D006059 ORTHO05D010613 1.0e-14 85.1 102 49.0
RcHm_v2.0_Chr2g0161601 Rosa chinensis HOM05D006059 ORTHO05D010613 2.3e-14 84.0 114 45.6
FAN14G4559 Fragaria x ananassa HOM05D006059 ORTHO05D209534 3.0e-14 83.6 73 58.9
FAN10G1186 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.8e-14 82.4 135 40.0
FAN13G1777 Fragaria x ananassa HOM05D006059 ORTHO05D201876 3.7e-12 76.6 118 46.6
FAN07G2379 Fragaria x ananassa HOM05D006059 ORTHO05D019147 1.4e-11 74.7 107 44.9
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.1e-11 73.6 90 48.9
RcHm_v2.0_Chr6g0279821 Rosa chinensis HOM05D006059 ORTHO05D010613 3.1e-11 73.6 118 42.4
FAN10G0957 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.4e-11 72.8 62 61.3
FAN28G0623 Fragaria x ananassa HOM05D006059 ORTHO05D010613 7.0e-11 72.4 106 44.3
FAN20G3195 Fragaria x ananassa HOM05D064877 ORTHO05D206928 9.1e-11 72.0 81 50.6
FAN03G2842 Fragaria x ananassa HOM05D006059 ORTHO05D200669 1.6e-10 71.2 86 47.7
FAN12G0752 Fragaria x ananassa HOM05D006059 ORTHO05D204696 1.6e-10 71.2 67 52.2
RcHm_v2.0_Chr5g0042021 Rosa chinensis HOM05D018137 ORTHO05D342665 2.7e-10 70.5 172 35.5
RcHm_v2.0_Chr2g0116941 Rosa chinensis HOM05D021305 ORTHO05D010102 3.5e-10 70.1 146 34.2
RcHm_v2.0_Chr1g0363721 Rosa chinensis HOM05D018137 ORTHO05D343934 5.0e-09 66.2 153 36.6
FvH4_6g37922 Fragaria vesca HOM05D006059 ORTHO05D010613 8.6e-09 65.5 108 41.7
FAN05G3510 Fragaria x ananassa HOM05D006059 ORTHO05D203405 1.9e-08 64.3 62 59.7
RcHm_v2.0_Chr2g0175631 Rosa chinensis HOM05D013926 ORTHO05D020985 3.3e-08 63.5 155 34.8
FAN03G1768 Fragaria x ananassa HOM05D006059 ORTHO05D207149 1.6e-07 61.2 153 34.6
RcHm_v2.0_Chr2g0173981 Rosa chinensis HOM05D018137 ORTHO05D343084 2.1e-07 60.8 224 31.7
RcHm_v2.0_Chr7g0239361 Rosa chinensis HOM05D018137 ORTHO05D340413 2.1e-07 60.8 95 42.1
RcHm_v2.0_Chr4g0394391 Rosa chinensis HOM05D018137 ORTHO05D347677 2.8e-07 60.5 179 35.2
RcHm_v2.0_Chr4g0388241 Rosa chinensis HOM05D013926 ORTHO05D020985 3.6e-07 60.1 155 34.2
RcHm_v2.0_Chr7g0195521 Rosa chinensis HOM05D013926 ORTHO05D020985 3.6e-07 60.1 155 34.2
FAN15G3726 Fragaria x ananassa HOM05D064877 ORTHO05D205770 4.7e-07 59.7 235 31.9
RcHm_v2.0_Chr4g0417091 Rosa chinensis HOM05D013926 ORTHO05D344408 4.0e-06 56.6 218 31.2


User provided reference genes

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