Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 9.5e-172 606.7 290 100.0
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 2.4e-159 565.5 290 92.8
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 4.1e-159 564.7 290 92.1
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 5.4e-159 564.3 290 92.4
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 5.1e-149 531.2 314 83.1
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 1.2e-137 493.4 290 79.3
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 1.7e-136 489.6 290 79.3
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 2.8e-131 472.2 289 74.4
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 9.0e-130 467.2 290 74.8
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.9e-127 459.5 290 73.1
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 2.3e-125 452.6 290 71.7
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 4.3e-124 448.4 290 69.7
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 4.3e-124 448.4 286 73.1
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 9.6e-124 447.2 286 73.4
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.5e-121 439.9 289 72.0
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 4.5e-121 438.3 290 71.4
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 5.8e-121 438.0 291 71.8
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 1.4e-119 433.3 288 71.2
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 7.1e-119 431.0 285 69.1
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 9.3e-119 430.6 286 68.9
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 1.6e-118 429.9 288 69.1
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 2.1e-118 429.5 285 70.5
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 6.0e-118 427.9 288 67.4
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 6.0e-118 427.9 288 67.4
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 2.3e-117 426.0 286 70.6
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 3.0e-117 425.6 285 68.8
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 3.0e-117 425.6 285 70.2
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 6.7e-117 424.5 290 67.9
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.9e-116 422.9 285 69.8
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.9e-116 422.9 285 69.8
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 1.9e-116 422.9 288 67.7
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 7.4e-116 421.0 288 67.0
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 1.6e-115 419.9 288 66.3
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 3.1e-114 415.6 289 65.7
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 6.9e-114 414.5 279 69.5
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 9.0e-114 414.1 289 65.4
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 1.7e-112 409.8 285 67.4
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 2.9e-112 409.1 288 66.0
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 1.9e-111 406.4 286 65.7
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 2.5e-111 406.0 291 66.0
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 7.1e-111 404.4 278 68.3
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 1.2e-110 403.7 291 66.3
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 2.1e-110 402.9 288 64.9
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 5.1e-109 398.3 286 64.0
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 5.1e-109 398.3 291 66.0
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 1.5e-108 396.7 285 65.3
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 4.3e-108 395.2 288 64.2
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 5.7e-108 394.8 284 65.5
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 4.8e-107 391.7 284 65.1
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 1.1e-106 390.6 283 64.3
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.4e-106 390.2 285 62.5
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 1.4e-106 390.2 288 63.9
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 9.0e-106 387.5 291 64.6
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.2e-105 387.1 286 61.9
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.5e-105 386.7 287 62.0
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 2.6e-105 386.0 285 63.5
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 2.6e-105 386.0 285 64.6
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 3.4e-105 385.6 289 61.2
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 4.5e-105 385.2 301 60.8
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 1.0e-104 384.0 286 61.5
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 2.2e-104 382.9 285 61.8
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 2.9e-104 382.5 286 60.8
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 3.8e-104 382.1 289 61.6
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 8.5e-104 380.9 292 62.7
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.4e-103 380.2 300 61.7
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 1.2e-102 377.1 287 60.3
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 1.6e-102 376.7 286 60.1
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 1.6e-102 376.7 290 61.4
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 4.6e-102 375.2 285 59.6
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 4.6e-102 375.2 285 59.6
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 7.9e-102 374.4 288 59.7
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 8.7e-101 370.9 284 60.9
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 1.1e-100 370.5 281 60.9
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 2.5e-100 369.4 286 60.5
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 2.5e-100 369.4 288 58.7
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 7.4e-100 367.9 285 60.7
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.6e-99 366.7 284 61.3
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 2.0e-97 359.8 288 60.4
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 3.8e-96 355.5 285 57.5
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 8.5e-96 354.4 285 58.9
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 1.2e-94 350.5 287 57.8
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 3.6e-94 349.0 262 61.5
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 3.0e-93 345.9 288 58.0
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 2.6e-92 342.8 283 56.9
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 4.4e-92 342.0 283 55.8
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 7.4e-92 341.3 271 59.4
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 1.1e-90 337.4 280 54.6
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 2.4e-90 336.3 284 54.6
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 9.1e-90 334.3 240 63.8
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 5.9e-89 331.6 283 53.7
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 1.2e-86 323.9 285 51.2
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 3.7e-83 312.4 241 60.6
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 5.0e-80 302.0 301 49.5
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 5.0e-80 302.0 287 49.5
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 5.5e-79 298.5 286 48.6
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 2.2e-64 250.0 283 42.8
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 1.6e-62 243.8 285 43.2
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 9.2e-58 228.0 273 46.2
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 1.3e-51 207.6 127 73.2
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 6.6e-40 168.7 198 44.4
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 1.0e-32 144.8 136 52.2
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 3.1e-29 133.3 272 33.5
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 5.4e-26 122.5 204 37.3
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 2.6e-20 103.6 101 52.5
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.5e-12 76.3 55 61.8
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 2.9e-11 73.6 256 27.3
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 4.9e-11 72.8 250 21.2
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 1.9e-07 60.8 44 59.1


User provided reference genes

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