Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g34930 Fragaria vesca HOM05D002804 ORTHO05D025426 1.3e-160 569.7 290 100.0
RcHm_v2.0_Chr7g0235841 Rosa chinensis HOM05D002804 ORTHO05D025426 1.5e-116 423.3 289 75.1
FvH4_5g34900 Fragaria vesca HOM05D002804 ORTHO05D025426 1.9e-116 422.9 289 76.5
FAN08G2676 Fragaria x ananassa HOM05D002804 ORTHO05D025426 5.6e-116 421.4 289 77.5
FAN04G3233 Fragaria x ananassa HOM05D002804 ORTHO05D025426 8.7e-101 370.9 245 80.0
RcHm_v2.0_Chr0c11g0499411 Rosa chinensis HOM05D002804 ORTHO05D003755 1.1e-74 284.3 291 53.6
RcHm_v2.0_Chr0c11g0499481 Rosa chinensis HOM05D002804 ORTHO05D003755 5.9e-73 278.5 292 52.1
RcHm_v2.0_Chr7g0236241 Rosa chinensis HOM05D002804 ORTHO05D003755 5.9e-73 278.5 292 52.1
RcHm_v2.0_Chr0c11g0499461 Rosa chinensis HOM05D002804 ORTHO05D003755 3.6e-70 269.2 279 54.1
RcHm_v2.0_Chr0c11g0499511 Rosa chinensis HOM05D002804 ORTHO05D003755 5.4e-66 255.4 290 48.3
RcHm_v2.0_Chr7g0236191 Rosa chinensis HOM05D002804 ORTHO05D022637 1.2e-65 254.2 268 53.4
FvH4_5g31080 Fragaria vesca HOM05D002804 ORTHO05D003755 7.2e-63 245.0 292 47.9
RcHm_v2.0_Chr7g0236331 Rosa chinensis HOM05D002804 ORTHO05D003755 2.6e-60 236.5 291 47.4
RcHm_v2.0_Chr7g0235811 Rosa chinensis HOM05D002804 ORTHO05D003755 1.1e-58 231.1 264 48.1
RcHm_v2.0_Chr7g0236051 Rosa chinensis HOM05D002804 ORTHO05D003755 1.6e-57 227.3 296 45.9
RcHm_v2.0_Chr7g0235921 Rosa chinensis HOM05D002804 ORTHO05D003755 2.7e-57 226.5 292 46.2
RcHm_v2.0_Chr7g0236031 Rosa chinensis HOM05D002804 ORTHO05D003755 1.0e-56 224.6 292 45.9
RcHm_v2.0_Chr7g0236231 Rosa chinensis HOM05D002804 ORTHO05D003755 6.1e-54 215.3 201 55.2
RcHm_v2.0_Chr1g0342791 Rosa chinensis HOM05D002804 ORTHO05D003755 1.8e-53 213.8 294 43.2
RcHm_v2.0_Chr0c11g0499471 Rosa chinensis HOM05D002804 ORTHO05D003755 8.9e-53 211.5 201 55.2
RcHm_v2.0_Chr7g0235901 Rosa chinensis HOM05D002804 ORTHO05D003755 2.9e-51 206.5 292 44.2
RcHm_v2.0_Chr7g0235851 Rosa chinensis HOM05D002804 ORTHO05D003755 4.1e-50 202.6 227 50.2
RcHm_v2.0_Chr7g0236071 Rosa chinensis HOM05D002804 ORTHO05D003755 2.3e-48 196.8 228 48.2
RcHm_v2.0_Chr7g0235991 Rosa chinensis HOM05D002804 ORTHO05D003755 1.2e-46 191.0 222 48.2
FvH4_5g35300 Fragaria vesca HOM05D002804 ORTHO05D003755 6.2e-46 188.7 292 41.4
FAN08G1215 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.1e-45 186.4 286 40.2
FAN18G3080 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.0e-45 186.0 293 41.6
FAN13G2866 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.4e-44 183.0 292 40.8
FAN04G3225 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.3e-43 181.0 201 49.3
FAN04G1488 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.7e-43 180.6 288 38.9
FvH4_5g05670 Fragaria vesca HOM05D002804 ORTHO05D003755 4.9e-43 179.1 291 39.2
FvH4_5g31070 Fragaria vesca HOM05D002804 ORTHO05D003755 2.4e-42 176.8 292 38.0
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.4e-42 175.6 291 38.1
FAN13G1580 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.4e-42 175.6 291 38.1
FvH4_5g35000 Fragaria vesca HOM05D002804 ORTHO05D003755 2.7e-41 173.3 292 39.4
RcHm_v2.0_Chr7g0193131 Rosa chinensis HOM05D002804 ORTHO05D003755 6.0e-41 172.2 289 38.4
FvH4_5g35070 Fragaria vesca HOM05D002804 ORTHO05D029636 7.8e-41 171.8 272 37.9
RcHm_v2.0_Chr7g0236021 Rosa chinensis HOM05D002804 ORTHO05D003755 7.8e-41 171.8 241 42.3
FAN18G3994 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.0e-40 171.4 291 38.8
FvH4_5g35080 Fragaria vesca HOM05D002804 ORTHO05D003755 1.7e-40 170.6 291 38.1
FAN18G3590 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.0e-40 169.9 290 37.9
RcHm_v2.0_Chr0c11g0499501 Rosa chinensis HOM05D002804 ORTHO05D003755 3.9e-40 169.5 209 46.4
FAN04G2366 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.5e-39 167.5 259 40.9
FAN03G3123 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.9e-39 167.2 266 38.3
FvH4_5g35060 Fragaria vesca HOM05D002804 ORTHO05D003755 6.2e-38 162.2 293 37.5
RcHm_v2.0_Chr7g0236591 Rosa chinensis HOM05D002804 ORTHO05D003755 6.8e-37 158.7 214 43.9
FvH4_5g35050 Fragaria vesca HOM05D002804 ORTHO05D003755 8.9e-37 158.3 256 39.5
RcHm_v2.0_Chr7g0235971 Rosa chinensis HOM05D002804 ORTHO05D003755 2.2e-35 153.7 207 44.9
FAN18G3729 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.1e-34 151.4 290 35.9
RcHm_v2.0_Chr0c11g0499321 Rosa chinensis HOM05D002804 ORTHO05D029636 1.4e-34 151.0 214 41.1
RcHm_v2.0_Chr7g0236101 Rosa chinensis HOM05D002804 ORTHO05D029636 1.4e-34 151.0 214 41.1
FAN18G0864 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.2e-34 149.8 285 34.4
FAN18G3114 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.2e-34 149.8 290 36.2
RcHm_v2.0_Chr0c11g0499401 Rosa chinensis HOM05D002804 ORTHO05D022637 5.4e-34 149.1 161 52.8
FAN13G2413 Fragaria x ananassa HOM05D002804 ORTHO05D022637 7.1e-34 148.7 205 43.4
FAN18G3851 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.6e-33 147.5 290 34.5
FAN06G4842 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.3e-32 144.4 269 35.3
FAN08G3046 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.3e-32 143.7 254 37.8
FAN18G4091 Fragaria x ananassa HOM05D002804 ORTHO05D003755 8.6e-32 141.7 295 35.3
RcHm_v2.0_Chr7g0235871 Rosa chinensis HOM05D002804 ORTHO05D003755 1.9e-31 140.6 171 47.4
FvH4_5g31001 Fragaria vesca HOM05D002804 ORTHO05D003755 2.5e-31 140.2 178 46.1
FvH4_5g35330 Fragaria vesca HOM05D002804 ORTHO05D003755 8.9e-29 131.7 208 40.9
FAN08G1393 Fragaria x ananassa HOM05D002804 ORTHO05D029665 4.9e-27 125.9 173 44.5
RcHm_v2.0_Chr7g0218381 Rosa chinensis HOM05D002804 ORTHO05D003755 1.1e-26 124.8 198 40.9
FAN18G1408 Fragaria x ananassa HOM05D002804 ORTHO05D022637 1.9e-26 124.0 166 47.0
FvH4_5g35320 Fragaria vesca HOM05D002804 ORTHO05D003755 3.2e-26 123.2 201 40.3
FvH4_5g35254 Fragaria vesca HOM05D002804 ORTHO05D022637 1.6e-25 120.9 166 46.4
RcHm_v2.0_Chr7g0236171 Rosa chinensis HOM05D002804 ORTHO05D003755 1.6e-25 120.9 174 40.8
FvH4_5g34950 Fragaria vesca HOM05D002804 ORTHO05D003755 3.0e-24 116.7 164 40.9
FvH4_7g08991 Fragaria vesca HOM05D002804 ORTHO05D003755 3.3e-23 113.2 161 40.4
FvH4_5g31132 Fragaria vesca HOM05D002804 ORTHO05D006737 9.6e-23 111.7 100 59.0
MD16G1193600 Malus domestica HOM05D002804 ORTHO05D003755 1.2e-22 111.3 206 33.5
FAN18G1140 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.6e-22 110.9 103 53.4
FvH4_5g31150 Fragaria vesca HOM05D002804 ORTHO05D022637 2.1e-22 110.5 132 49.2
FvH4_5g35322 Fragaria vesca HOM05D002804 ORTHO05D003755 6.2e-22 109.0 291 30.9
RcHm_v2.0_Chr7g0235931 Rosa chinensis HOM05D002804 ORTHO05D003755 8.1e-22 108.6 211 38.4
RcHm_v2.0_Chr0c11g0499391 Rosa chinensis HOM05D002804 ORTHO05D003755 3.4e-20 103.2 174 38.5
RcHm_v2.0_Chr7g0218341 Rosa chinensis HOM05D002804 ORTHO05D003755 7.6e-20 102.1 117 48.7
FAN10G1430 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.1e-18 98.2 213 34.3
FAN08G3093 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.1e-18 95.5 98 51.0
FvH4_7g08990 Fragaria vesca HOM05D002804 ORTHO05D003755 6.0e-17 92.4 281 28.5
RcHm_v2.0_Chr7g0235981 Rosa chinensis HOM05D002804 ORTHO05D003755 1.0e-16 91.7 100 49.0
FAN04G0362 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.0e-16 90.1 130 40.8
FvH4_5g05700 Fragaria vesca HOM05D002804 ORTHO05D003755 6.6e-16 89.0 156 38.5
FAN10G1692 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.1e-15 88.2 211 31.3
FAN18G0121 Fragaria x ananassa HOM05D002804 ORTHO05D029665 3.3e-15 86.7 173 35.8
FvH4_4g16590 Fragaria vesca HOM05D002804 ORTHO05D003755 4.3e-15 86.3 122 40.2
FAN12G4232 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.3e-15 86.3 122 40.2
RcHm_v2.0_Chr3g0459231 Rosa chinensis HOM05D002804 ORTHO05D003755 5.6e-15 85.9 143 37.1
RcHm_v2.0_Chr7g0236631 Rosa chinensis HOM05D002804 ORTHO05D029636 7.3e-15 85.5 90 46.7
FAN13G1594 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.1e-14 84.0 199 34.7
FvH4_5g32080 Fragaria vesca HOM05D002804 ORTHO05D029665 3.6e-14 83.2 154 36.4
FvH4_6g08940 Fragaria vesca HOM05D002804 ORTHO05D003755 3.1e-13 80.1 124 38.7
RcHm_v2.0_Chr3g0459161 Rosa chinensis HOM05D002804 ORTHO05D003755 3.1e-13 80.1 108 43.5
RcHm_v2.0_Chr3g0459181 Rosa chinensis HOM05D002804 ORTHO05D003755 3.1e-13 80.1 161 31.7
RcHm_v2.0_Chr3g0459201 Rosa chinensis HOM05D002804 ORTHO05D003755 4.0e-13 79.7 300 27.3
FAN02G4619 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.3e-13 79.3 124 38.7
RcHm_v2.0_Chr3g0459171 Rosa chinensis HOM05D002804 ORTHO05D003755 5.3e-13 79.3 319 25.1
MD16G1177800 Malus domestica HOM05D002804 ORTHO05D003755 6.9e-13 79.0 144 34.7
FAN13G1238 Fragaria x ananassa HOM05D002804 ORTHO05D003755 9.0e-13 78.6 66 63.6
RcHm_v2.0_Chr0c11g0499521 Rosa chinensis HOM05D002804 ORTHO05D003755 9.0e-13 78.6 63 61.9
FvH4_6g08870 Fragaria vesca HOM05D002804 ORTHO05D003755 2.6e-12 77.0 108 41.7
FAN05G3459 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.8e-12 75.9 124 37.9
FAN14G2492 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.6e-12 75.5 277 25.6
FAN14G5607 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.6e-12 75.5 108 40.7
FAN05G2457 Fragaria x ananassa HOM05D002804 ORTHO05D003755 9.9e-12 75.1 108 40.7
FAN10G1025 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.3e-11 74.7 182 31.3
FAN02G0182 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.7e-11 74.3 108 39.8
Dinv30965 Davidia involucrata HOM05D002804 ORTHO05D003755 6.4e-11 72.4 111 37.8
RcHm_v2.0_Chr4g0420021 Rosa chinensis HOM05D002804 ORTHO05D003755 1.1e-10 71.6 148 36.5
FvH4_5g35253 Fragaria vesca HOM05D002804 ORTHO05D003755 1.4e-10 71.2 103 40.8
FAN26G3455 Fragaria x ananassa HOM05D002804 ORTHO05D011158 1.4e-10 71.2 89 47.2
RcHm_v2.0_Chr7g0236001 Rosa chinensis HOM05D002804 ORTHO05D341774 1.4e-10 71.2 63 57.1
RcHm_v2.0_Chr7g0236221 Rosa chinensis HOM05D002804 ORTHO05D341151 1.4e-10 71.2 88 45.5
RcHm_v2.0_Chr7g0235881 Rosa chinensis HOM05D002804 ORTHO05D003755 3.2e-10 70.1 65 52.3
RcHm_v2.0_Chr7g0218371 Rosa chinensis HOM05D002804 ORTHO05D003755 7.1e-10 68.9 64 53.1
FAN02G1490 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.6e-09 67.8 89 46.1
FAN18G4551 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.6e-09 67.8 94 42.6
FAN03G0147 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.7e-09 67.0 147 29.9
RcHm_v2.0_Chr4g0419921 Rosa chinensis HOM05D002804 ORTHO05D003755 2.7e-09 67.0 148 35.1
Sopen01g044910 Solanum pennellii HOM05D002804 ORTHO05D003755 2.7e-09 67.0 112 35.7
FAN08G1735 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.6e-09 66.2 64 54.7
Solyc01g102470.2 Solanum lycopersicum HOM05D002804 ORTHO05D003755 4.6e-09 66.2 112 35.7
RcHm_v2.0_Chr3g0459121 Rosa chinensis HOM05D002804 ORTHO05D003755 7.9e-09 65.5 220 28.6
FAN13G1711 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.3e-08 64.7 123 35.0
FAN08G3255 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.9e-08 63.2 49 61.2
RcHm_v2.0_Chr1g0342991 Rosa chinensis HOM05D002804 ORTHO05D003755 5.1e-08 62.8 101 39.6
TPR.G3051 Trifolium pratense HOM05D002804 ORTHO05D003755 6.7e-08 62.4 153 29.4
DCAR_003256 Daucus carota HOM05D002804 ORTHO05D003755 1.1e-07 61.6 119 29.4
FvH4_5g32070 Fragaria vesca HOM05D002804 ORTHO05D003755 1.1e-07 61.6 64 50.0
FAN13G0820 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.1e-07 61.6 64 46.9
FvH4_6g08910 Fragaria vesca HOM05D002804 ORTHO05D003755 1.5e-07 61.2 252 25.8
Cfa009693 Carpinus fangiana HOM05D002804 ORTHO05D003755 3.3e-07 60.1 153 27.5
FAN18G1608 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.3e-07 60.1 64 48.4
Psat6g157320 Pisum sativum HOM05D002804 ORTHO05D003755 3.3e-07 60.1 150 30.0
Lalb_Chr02g0147321 Lupinus albus HOM05D002804 ORTHO05D003755 4.3e-07 59.7 153 28.1
Os06g0308200 Oryza sativa ssp. japonica HOM05D002804 ORTHO05D003755 4.3e-07 59.7 149 26.8
CiPaw.04G013600 Carya illinoinensis HOM05D002804 ORTHO05D003755 1.3e-06 58.2 106 35.8
Gohir.A09G116900 Gossypium hirsutum HOM05D002804 ORTHO05D003755 1.3e-06 58.2 143 30.8
FAN08G0149 Fragaria x ananassa HOM05D002804 ORTHO05D029665 2.1e-06 57.4 114 35.1
FAN05G1021 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.7e-06 56.6 143 30.1
FAN25G3079 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.7e-06 56.6 49 59.2
VMungo0720G2485 Vigna mungo HOM05D002804 ORTHO05D003755 3.7e-06 56.6 158 27.8
RcHm_v2.0_Chr7g0236201 Rosa chinensis HOM05D002804 ORTHO05D003755 4.8e-06 56.2 85 37.6


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