Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 1.9e-103 379.4 223 100.0
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 1.7e-88 329.7 223 84.3
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 1.3e-72 276.9 221 70.1
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 5.0e-72 275.0 223 70.0
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 1.0e-69 267.3 221 68.8
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 3.9e-56 222.2 217 59.0
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 1.5e-55 220.3 218 59.2
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 3.3e-55 219.2 218 58.7
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 3.3e-55 219.2 220 58.6
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 5.6e-55 218.4 215 60.0
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 5.6e-55 218.4 219 60.7
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 5.6e-55 218.4 219 60.7
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 5.6e-55 218.4 218 60.6
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 9.5e-55 217.6 217 59.0
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 4.7e-54 215.3 218 58.3
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 1.1e-53 214.2 215 58.6
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 1.4e-53 213.8 219 57.1
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 1.4e-53 213.8 217 58.1
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 2.3e-53 213.0 218 57.8
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 2.3e-53 213.0 218 58.3
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 4.0e-53 212.2 218 58.3
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 5.2e-53 211.8 219 57.5
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 6.8e-53 211.5 219 59.4
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 8.9e-53 211.1 221 56.1
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.5e-52 210.3 218 57.3
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.0e-52 209.9 218 58.7
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 2.0e-52 209.9 219 56.2
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 2.0e-52 209.9 219 55.3
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 3.4e-52 209.1 218 56.9
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 9.8e-52 207.6 214 55.6
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 2.2e-51 206.5 219 54.8
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 8.3e-51 204.5 214 57.5
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 8.3e-51 204.5 219 54.8
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 1.1e-50 204.1 217 54.8
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 2.4e-50 203.0 218 54.6
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 7.1e-50 201.4 219 55.3
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.2e-49 200.7 219 53.9
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 1.6e-49 200.3 216 54.2
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.6e-49 200.3 219 54.8
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 1.3e-48 197.2 224 54.5
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 2.3e-48 196.4 213 54.9
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 3.9e-48 195.7 213 54.0
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 3.9e-48 195.7 218 53.2
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 1.1e-47 194.1 216 52.3
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.9e-47 193.4 220 53.2
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 1.9e-47 193.4 213 53.1
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 3.3e-47 192.6 219 53.0
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 2.1e-46 189.9 219 53.4
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.8e-46 189.5 218 56.0
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 6.2e-46 188.3 215 51.6
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.3e-45 186.4 217 54.8
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 1.2e-44 184.1 220 50.9
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 1.5e-44 183.7 222 51.4
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 2.0e-44 183.3 216 49.5
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 4.4e-44 182.2 204 51.0
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 4.4e-44 182.2 213 51.2
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 7.6e-44 181.4 215 50.2
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 1.1e-42 177.6 217 47.5
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 1.1e-42 177.6 180 54.4
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 1.0e-40 171.0 216 47.7
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.7e-40 170.2 204 51.0
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.7e-40 170.2 217 46.1
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 5.1e-40 168.7 218 45.4
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 1.5e-39 167.2 215 46.5
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 1.9e-39 166.8 215 46.0
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 3.3e-39 166.0 216 45.8
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 5.6e-39 165.2 217 44.7
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 9.6e-39 164.5 217 51.2
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 1.2e-38 164.1 217 46.1
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.8e-38 162.9 214 48.1
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 2.8e-38 162.9 219 44.7
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 3.6e-38 162.5 204 47.5
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 6.2e-38 161.8 220 46.4
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 8.1e-38 161.4 215 48.4
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 1.1e-37 161.0 218 49.5
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.4e-37 160.6 212 45.3
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 1.8e-37 160.2 217 45.2
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 2.4e-37 159.8 214 45.3
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 5.2e-37 158.7 218 43.6
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 6.9e-37 158.3 216 45.4
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 6.9e-37 158.3 216 44.9
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 1.5e-36 157.1 219 44.7
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 2.6e-36 156.4 220 46.4
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 2.6e-36 156.4 214 45.3
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 9.9e-36 154.5 214 46.3
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 1.7e-35 153.7 221 43.4
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 6.4e-35 151.8 217 45.2
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 1.1e-34 151.0 221 42.5
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 1.4e-34 150.6 216 45.4
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 1.4e-34 150.6 209 45.9
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.9e-34 150.2 212 43.4
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 1.9e-34 150.2 218 41.3
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 2.4e-34 149.8 215 42.8
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 7.1e-34 148.3 174 53.4
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 9.3e-34 147.9 216 44.0
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 1.2e-33 147.5 216 45.4
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.1e-33 146.7 217 44.2
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.6e-33 145.6 212 45.3
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 4.6e-33 145.6 216 44.4
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 7.8e-33 144.8 217 43.8
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.0e-32 144.4 216 44.9
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 1.1e-31 141.0 159 51.6
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 5.6e-31 138.7 216 43.1
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 7.3e-31 138.3 215 41.9
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 9.6e-31 137.9 211 39.8
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 1.6e-30 137.1 221 41.6
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 3.6e-30 136.0 195 49.7
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 3.6e-30 136.0 206 49.5
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 6.2e-30 135.2 216 42.1
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 1.4e-29 134.0 207 44.9
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 1.2e-28 131.0 231 39.4
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 2.6e-28 129.8 208 40.4
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 2.2e-27 126.7 223 37.2
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 4.9e-27 125.6 222 42.8
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 5.4e-26 122.1 219 38.4
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 3.5e-25 119.4 218 38.1
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 4.6e-25 119.0 218 37.2
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.0e-24 117.9 226 35.8
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 3.0e-24 116.3 220 36.8
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 8.7e-24 114.8 109 56.0
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 1.1e-23 114.4 146 46.6
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.5e-23 113.2 226 37.2
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 5.6e-23 112.1 212 39.2
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 4.8e-22 109.0 205 38.5
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 4.8e-22 109.0 202 38.6
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 6.2e-22 108.6 221 37.1
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 3.1e-21 106.3 144 47.9
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 4.0e-21 105.9 211 37.4
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 5.3e-21 105.5 221 33.9
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 6.9e-21 105.1 220 34.5
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 6.9e-21 105.1 220 34.5
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 6.9e-21 105.1 213 37.1
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 4.5e-20 102.4 202 38.6
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 9.9e-20 101.3 202 38.6
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 9.9e-20 101.3 218 34.9
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 1.3e-19 100.9 202 38.1
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 1.3e-19 100.9 202 38.1
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.3e-19 100.9 221 33.5
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 2.9e-19 99.8 219 35.6
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 4.9e-19 99.0 208 34.1
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 1.1e-18 97.8 204 36.8
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 1.9e-18 97.1 204 36.8
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.9e-18 97.1 143 44.1
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 2.1e-17 93.6 210 34.8
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 3.5e-17 92.8 202 37.1
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 4.6e-17 92.4 196 36.7
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 4.6e-17 92.4 218 35.3
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 4.3e-15 85.9 216 30.6
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 7.4e-15 85.1 138 38.4
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 9.6e-15 84.7 217 29.5
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 1.6e-09 67.4 120 38.3
Phvul.008G182701 Phaseolus vulgaris HOM05D004648 ORTHO05D307582 3.9e-08 62.8 93 45.2
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 1.1e-07 61.2 111 39.6


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