Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 6.0e-197 690.6 351 100.0
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 1.8e-185 652.5 380 90.0
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 2.1e-181 639.0 355 92.4
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 9.7e-171 603.6 350 86.9
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 7.7e-168 594.0 350 86.9
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 2.9e-159 565.5 346 82.1
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.5e-158 562.4 355 80.8
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 8.0e-157 557.4 349 79.7
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.3e-156 555.8 351 79.2
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 3.0e-156 555.4 353 79.9
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.5e-155 553.1 346 81.2
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 2.0e-155 552.7 348 80.7
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 2.6e-155 552.4 349 79.1
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 2.6e-155 552.4 351 78.9
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 7.5e-155 550.8 348 80.7
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 7.5e-155 550.8 353 79.0
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.3e-154 550.1 351 78.1
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 3.7e-154 548.5 345 81.7
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 6.3e-154 547.7 348 78.4
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 6.3e-154 547.7 347 79.5
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 8.3e-154 547.4 350 78.3
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.1e-153 547.0 347 78.7
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.1e-153 547.0 345 79.4
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.4e-153 546.6 346 81.2
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 1.8e-153 546.2 348 79.6
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 2.4e-153 545.8 347 79.0
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 4.1e-153 545.0 348 77.9
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 4.1e-153 545.0 348 77.9
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 4.1e-153 545.0 348 78.4
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 5.3e-153 544.7 348 77.9
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 5.3e-153 544.7 353 77.3
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.2e-152 543.5 345 81.2
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 1.6e-152 543.1 348 77.6
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 2.0e-152 542.7 348 78.2
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 2.0e-152 542.7 348 78.4
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.7e-152 542.3 344 79.9
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 3.5e-152 542.0 351 78.3
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 5.9e-152 541.2 348 79.3
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 5.9e-152 541.2 343 80.2
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 5.9e-152 541.2 348 78.2
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 7.7e-152 540.8 353 77.3
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.7e-151 539.7 348 77.3
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.7e-151 539.7 338 79.3
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 2.2e-151 539.3 348 77.0
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 2.9e-151 538.9 350 78.6
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 3.8e-151 538.5 336 81.0
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 5.0e-151 538.1 351 78.3
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 8.5e-151 537.3 344 78.5
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.5e-150 536.6 348 77.9
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 1.5e-150 536.6 349 77.1
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.9e-150 536.2 336 81.2
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.5e-150 535.8 348 76.1
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 4.2e-150 535.0 350 77.4
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 4.2e-150 535.0 339 79.4
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 9.4e-150 533.9 339 79.6
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 9.4e-150 533.9 342 79.5
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 1.6e-149 533.1 348 75.6
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.7e-149 532.3 351 79.5
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.0e-148 530.4 348 76.1
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 1.8e-148 529.6 356 78.4
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 1.8e-148 529.6 323 81.1
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.3e-148 529.3 341 77.4
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 4.0e-148 528.5 335 76.7
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 5.2e-148 528.1 350 75.7
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 8.8e-148 527.3 357 75.6
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.6e-147 525.8 353 74.5
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 4.4e-147 525.0 350 77.1
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.1e-145 520.4 340 78.5
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 4.1e-145 518.5 323 80.2
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 9.1e-145 517.3 312 82.4
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 9.1e-145 517.3 340 76.5
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 4.5e-144 515.0 347 74.9
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 9.5e-142 507.3 400 65.8
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 1.6e-141 506.5 346 73.1
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 3.0e-140 502.3 343 72.0
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 4.0e-140 501.9 343 73.8
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 1.5e-139 500.0 344 75.3
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.4e-137 492.7 342 72.2
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 7.8e-136 487.6 350 72.6
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.0e-135 487.3 346 71.7
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 8.6e-135 484.2 321 74.8
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 4.1e-129 465.3 263 87.5
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.2e-128 463.8 342 69.0
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 5.0e-127 458.4 349 65.3
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 3.6e-125 452.2 323 67.2
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 8.3e-122 441.0 350 68.0
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.3e-119 433.7 340 62.1
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 3.0e-119 432.6 255 82.7
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.8e-116 423.3 308 66.2
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 5.1e-111 405.2 347 64.3
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.1e-111 405.2 350 63.4
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.1e-110 404.1 400 57.8
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 4.4e-107 392.1 337 64.4
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 7.6e-107 391.3 368 61.1
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 3.8e-106 389.0 229 82.5
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 9.3e-105 384.4 531 46.9
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 4.8e-101 372.1 222 82.4
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.4e-100 370.5 249 77.1
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 6.4e-90 335.1 274 66.4
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 1.0e-82 311.2 337 53.7
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.8e-76 290.4 167 83.2
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.8e-71 273.9 177 78.5
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 9.0e-68 261.5 220 58.2
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.7e-66 257.3 397 38.8
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 1.7e-61 240.7 325 43.4
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.7e-58 230.7 130 83.8
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 5.9e-51 205.7 127 80.3
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.4e-47 194.5 353 37.1
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.4e-47 194.5 346 36.1
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 6.3e-45 185.7 126 73.0
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.2e-40 171.4 97 83.5
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.7e-37 161.0 100 70.0
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.3e-34 151.4 84 86.9
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.2e-29 134.0 65 98.5
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 5.0e-26 122.9 83 68.7
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.5e-17 94.0 76 60.5
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.8e-16 90.5 56 87.5
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.0e-11 74.3 44 70.5
Os02g0581500 Oryza sativa ssp. japonica HOM05D003438 ORTHO05D004235 2.0e-06 57.8 277 26.4
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 7.5e-06 55.8 30 83.3


User provided reference genes

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