Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g32541 Fragaria vesca HOM05D000003 ORTHO05D006737 8.9e-63 243.4 122 100.0
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 7.9e-19 97.4 154 32.5
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 1.7e-18 96.3 143 35.7
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 1.7e-18 96.3 116 38.8
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 5.1e-18 94.7 143 35.0
FvH4_4g12942 Fragaria vesca HOM05D001338 ORTHO05D001239 2.1e-16 89.4 123 39.0
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 6.2e-16 87.8 116 43.1
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 9.0e-15 84.0 139 33.1
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 9.0e-15 84.0 154 29.9
FvH4_6g20980 Fragaria vesca HOM05D017784 ORTHO05D006737 1.2e-14 83.6 131 38.2
FAN14G0664 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.6e-14 82.4 134 38.8
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 7.6e-14 80.9 109 34.9
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 9.9e-14 80.5 141 31.9
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 3.8e-13 78.6 147 30.6
FvH4_3g29251 Fragaria vesca HOM05D000003 ORTHO05D006737 1.9e-12 76.3 112 30.4
FAN11G2316 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.1e-12 74.3 108 38.0
FAN05G1347 Fragaria x ananassa HOM05D015760 ORTHO05D020672 3.5e-11 72.0 122 32.8
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.3e-10 70.1 110 31.8
FvH4_5g04240 Fragaria vesca HOM05D000003 ORTHO05D000004 3.0e-10 68.9 138 31.9
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 3.0e-10 68.9 141 26.2
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 3.0e-10 68.9 142 24.6
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 6.7e-10 67.8 141 26.2
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.7e-10 67.8 141 27.0
FvH4_4g24131 Fragaria vesca HOM05D000003 ORTHO05D015112 1.5e-09 66.6 114 28.9
FvH4_3g14382 Fragaria vesca HOM05D000003 ORTHO05D006737 9.6e-09 63.9 125 27.2
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 3.7e-08 62.0 154 27.3
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 6.2e-08 61.2 42 66.7
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.4e-07 59.3 42 64.3
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 4.0e-07 58.5 42 64.3
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 5.3e-07 58.2 42 64.3
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 9.0e-07 57.4 42 61.9
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 9.0e-07 57.4 42 66.7
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.2e-06 57.0 38 65.8
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 2.0e-06 56.2 42 61.9
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 2.0e-06 56.2 42 64.3
QL08p050793 Quercus lobata HOM05D000003 ORTHO05D000167 2.0e-06 56.2 121 29.8
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.6e-06 54.3 39 69.2
FAN15G0457 Fragaria x ananassa HOM05D007797 ORTHO05D009741 1.0e-05 53.9 42 59.5


User provided reference genes

Program Settings