Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 5.9e-55 217.2 105 100.0
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 5.5e-29 131.0 66 90.9
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 2.7e-28 128.6 66 86.4
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.7e-28 128.6 66 92.4
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 8.0e-28 127.1 66 89.4
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 8.0e-28 127.1 66 84.8
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 1.0e-27 126.7 66 86.4
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.0e-27 126.7 66 89.4
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 1.4e-27 126.3 73 79.5
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 1.8e-27 125.9 66 87.9
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.3e-27 125.6 66 89.4
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 3.0e-27 125.2 66 84.8
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 3.0e-27 125.2 66 84.8
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 3.0e-27 125.2 66 86.4
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 4.0e-27 124.8 66 87.9
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 4.0e-27 124.8 66 83.3
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 4.0e-27 124.8 66 83.3
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 5.2e-27 124.4 66 84.8
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 5.2e-27 124.4 66 86.4
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 6.7e-27 124.0 66 84.8
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 6.7e-27 124.0 66 84.8
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 6.7e-27 124.0 66 86.4
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 8.8e-27 123.6 66 86.4
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.5e-26 122.9 66 84.8
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 2.0e-26 122.5 66 83.3
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 2.0e-26 122.5 66 83.3
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 2.0e-26 122.5 66 83.3
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 2.0e-26 122.5 66 83.3
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.6e-26 122.1 66 83.3
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 2.6e-26 122.1 74 74.3
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 2.6e-26 122.1 66 83.3
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 3.3e-26 121.7 66 83.3
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.3e-26 121.7 66 84.8
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.3e-26 121.7 66 81.8
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.3e-26 121.7 66 81.8
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 4.4e-26 121.3 71 77.5
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 4.4e-26 121.3 66 84.8
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 5.7e-26 120.9 66 83.3
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 5.7e-26 120.9 66 86.4
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 5.7e-26 120.9 66 81.8
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 7.5e-26 120.6 66 83.3
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 7.5e-26 120.6 66 83.3
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 7.5e-26 120.6 66 83.3
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 7.5e-26 120.6 66 84.8
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 7.5e-26 120.6 66 83.3
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 7.5e-26 120.6 66 81.8
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 1.3e-25 119.8 66 81.8
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.3e-25 119.8 66 83.3
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 1.7e-25 119.4 66 81.8
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 2.2e-25 119.0 66 80.3
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 2.2e-25 119.0 66 81.8
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.8e-25 118.6 66 84.8
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 3.7e-25 118.2 66 80.3
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 3.7e-25 118.2 66 81.8
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 4.8e-25 117.9 66 80.3
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 4.8e-25 117.9 66 78.8
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 6.3e-25 117.5 66 80.3
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 6.3e-25 117.5 66 78.8
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 6.3e-25 117.5 66 78.8
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.3e-25 117.5 59 89.8
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 8.2e-25 117.1 66 77.3
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 8.2e-25 117.1 66 80.3
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.4e-24 116.3 66 81.8
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 1.4e-24 116.3 66 78.8
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.8e-24 115.9 66 78.8
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 1.8e-24 115.9 66 81.8
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 80.3
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 80.3
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 81.8
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 81.8
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 81.8
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 81.8
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 81.8
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 80.3
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.4e-24 115.5 66 80.3
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 3.1e-24 115.2 66 78.8
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 3.1e-24 115.2 66 78.8
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 3.1e-24 115.2 66 80.3
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 4.1e-24 114.8 66 77.3
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 5.3e-24 114.4 65 76.9
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 5.3e-24 114.4 66 77.3
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 5.3e-24 114.4 66 77.3
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 5.3e-24 114.4 65 78.5
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 7.0e-24 114.0 66 77.3
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 1.6e-23 112.8 66 80.3
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.6e-23 112.8 67 77.6
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.0e-23 112.5 66 75.8
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.0e-23 112.5 66 77.3
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 2.7e-23 112.1 58 82.8
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 3.5e-23 111.7 66 80.3
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 4.5e-23 111.3 66 72.7
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.7e-23 110.5 66 72.7
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 5.0e-22 107.8 66 69.7
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 6.5e-22 107.5 66 72.7
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 8.5e-22 107.1 66 77.3
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-21 106.3 66 69.7
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.5e-21 106.3 66 69.7
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.6e-20 102.8 62 72.6
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.6e-20 101.7 66 68.2
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.7e-20 101.3 66 66.7
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.7e-20 101.3 66 66.7
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.7e-20 101.3 66 66.7
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 6.1e-20 100.9 55 80.0
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 8.0e-20 100.5 59 72.9
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 8.0e-20 100.5 59 72.9
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.8e-19 99.4 66 69.7
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 2.3e-19 99.0 54 83.3
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.3e-19 99.0 66 65.2
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.6e-18 95.5 66 60.6
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.4e-18 95.1 66 62.1
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.7e-17 92.8 66 60.6
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.7e-17 92.8 66 60.6
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.7e-17 92.8 66 60.6
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.2e-17 92.4 66 60.6
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 2.2e-17 92.4 62 67.7
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 2.8e-17 92.0 66 60.6
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.7e-17 91.7 66 59.1
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.1e-16 88.6 64 57.8
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 9.1e-16 87.0 58 69.0
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.9e-14 82.0 44 77.3
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.2e-12 76.6 43 74.4
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.7e-06 56.2 66 42.4


User provided reference genes

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