Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g32181 Fragaria vesca HOM05D000030 ORTHO05D013601 2.8e-115 418.7 223 100.0
FvH4_6g30963 Fragaria vesca HOM05D000030 ORTHO05D013601 4.0e-93 345.1 208 88.5
FvH4_c5g00011 Fragaria vesca HOM05D000030 ORTHO05D013601 1.7e-91 339.7 208 86.5
FAN11G3199 Fragaria x ananassa HOM05D000030 ORTHO05D013601 7.0e-82 307.8 191 85.9
FAN22G0310 Fragaria x ananassa HOM05D000030 ORTHO05D013601 3.5e-81 305.4 195 80.0
FAN19G0008 Fragaria x ananassa HOM05D000030 ORTHO05D013601 1.5e-76 290.0 201 74.6
FvH4_2g05022 Fragaria vesca HOM05D000030 ORTHO05D000009 4.9e-67 258.5 205 66.8
FvH4_4g10395 Fragaria vesca HOM05D000030 ORTHO05D000009 5.4e-66 255.0 205 66.3
FvH4_6g28381 Fragaria vesca HOM05D000030 ORTHO05D013601 3.5e-65 252.3 205 67.3
FAN11G2172 Fragaria x ananassa HOM05D000030 ORTHO05D013601 3.5e-65 252.3 190 73.2
FAN12G0141 Fragaria x ananassa HOM05D000030 ORTHO05D013601 3.4e-60 235.7 160 73.1
FAN02G1203 Fragaria x ananassa HOM05D000030 ORTHO05D013601 6.0e-49 198.4 149 69.1
FvH4_3g19350 Fragaria vesca HOM05D000026 ORTHO05D000127 1.0e-40 171.0 166 58.4
FAN12G0238 Fragaria x ananassa HOM05D000030 ORTHO05D013601 1.4e-37 160.6 188 53.2
FvH4_4g07681 Fragaria vesca HOM05D000030 ORTHO05D013601 2.6e-36 156.4 156 60.3
FAN27G2141 Fragaria x ananassa HOM05D000030 ORTHO05D013601 4.9e-27 125.6 87 73.6
FAN24G3227 Fragaria x ananassa HOM05D000030 ORTHO05D013601 3.0e-24 116.3 93 63.4
FAN08G2044 Fragaria x ananassa HOM05D000030 ORTHO05D013601 2.2e-19 100.1 87 65.5
RcHm_v2.0_Chr3g0496331 Rosa chinensis HOM05D000030 ORTHO05D000009 1.9e-18 97.1 119 42.9
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 1.6e-17 94.0 119 42.9
FvH4_3g17731 Fragaria vesca HOM05D000030 ORTHO05D000031 7.9e-17 91.7 125 36.0
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 1.3e-16 90.9 121 37.2
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 6.7e-16 88.6 109 37.6
FvH4_1g29581 Fragaria vesca HOM05D000030 ORTHO05D000031 5.6e-15 85.5 105 37.1
FvH4_1g17901 Fragaria vesca HOM05D000030 ORTHO05D000031 3.7e-14 82.8 109 34.9
Lj2C73T8 Lonicera japonica HOM05D011311 ORTHO05D000009 3.7e-14 82.8 106 39.6
Lj3P609T9 Lonicera japonica HOM05D011311 ORTHO05D000009 4.8e-14 82.4 126 35.7
FvH4_4g08573 Fragaria vesca HOM05D000030 ORTHO05D000031 6.2e-14 82.0 210 34.8
Lj5P369T32 Lonicera japonica HOM05D011311 ORTHO05D000009 1.8e-13 80.5 126 34.9
FvH4_6g32751 Fragaria vesca HOM05D000030 ORTHO05D020648 2.4e-13 80.1 167 31.7
FvH4_3g32841 Fragaria vesca HOM05D000030 ORTHO05D020648 5.3e-13 79.0 166 31.9
Lj8P480T12 Lonicera japonica HOM05D011311 ORTHO05D000009 5.3e-13 79.0 106 38.7
FAN02G2917 Fragaria x ananassa HOM05D000030 ORTHO05D045505 1.5e-12 77.4 78 61.5
SGA_v2.0_scaffold2G01199 Striga asiatica HOM05D000030 ORTHO05D000009 2.0e-12 77.0 128 34.4
FvH4_4g16142 Fragaria vesca HOM05D000030 ORTHO05D000009 3.4e-12 76.3 110 38.2
Lj1P505T9 Lonicera japonica HOM05D011311 ORTHO05D000009 7.6e-12 75.1 106 36.8
Lju3616C0T1 Lonicera japonica HOM05D011311 ORTHO05D000009 7.6e-12 75.1 126 34.1
FvH4_2g26902 Fragaria vesca HOM05D000030 ORTHO05D000009 2.9e-11 73.2 105 35.2
FAN20G2390 Fragaria x ananassa HOM05D000030 ORTHO05D020648 6.5e-11 72.0 70 47.1
Lj3P1011T16 Lonicera japonica HOM05D011311 ORTHO05D000009 1.2e-09 67.8 94 34.0
Lj5P277T26 Lonicera japonica HOM05D011311 ORTHO05D000009 1.2e-09 67.8 124 35.5
FAN22G0785 Fragaria x ananassa HOM05D000030 ORTHO05D020648 1.6e-09 67.4 140 31.4
FAN07G0457 Fragaria x ananassa HOM05D011311 ORTHO05D000009 7.9e-09 65.1 91 38.5
FAN24G0049 Fragaria x ananassa HOM05D000030 ORTHO05D013601 1.8e-08 63.9 77 61.0
Lj8P416T18 Lonicera japonica HOM05D011311 ORTHO05D000009 3.0e-08 63.2 89 34.8
RcHm_v2.0_Chr7g0235391 Rosa chinensis HOM05D011311 ORTHO05D020648 3.0e-08 63.2 135 31.1
RcHm_v2.0_Chr4g0391261 Rosa chinensis HOM05D000030 ORTHO05D000009 5.1e-08 62.4 75 38.7
FvH4_1g21452 Fragaria vesca HOM05D000030 ORTHO05D000031 1.1e-07 61.2 69 55.1
Lj8P188T26 Lonicera japonica HOM05D011311 ORTHO05D000009 4.3e-07 59.3 89 33.7
RcHm_v2.0_Chr5g0016291 Rosa chinensis HOM05D000030 ORTHO05D000009 5.7e-07 58.9 114 31.6
CANSAT80G2716 Cannabis sativa HOM05D000030 ORTHO05D000009 2.1e-06 57.0 98 39.8
FvH4_4g00331 Fragaria vesca HOM05D000030 ORTHO05D196507 8.2e-06 55.1 55 60.0


User provided reference genes

Program Settings