Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 3.0e-72 275.0 132 100.0
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 2.0e-60 235.7 131 86.3
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.1e-50 203.4 103 96.1
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 4.8e-46 188.0 103 91.3
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 3.7e-38 161.8 130 64.6
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.8e-37 159.5 107 70.1
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 1.0e-35 153.7 117 66.7
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 1.3e-35 153.3 78 88.5
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.3e-35 153.3 79 87.3
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 1.4e-34 149.8 77 83.1
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.9e-34 149.4 83 81.9
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 9.3e-34 147.1 85 76.5
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.6e-33 146.4 101 69.3
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.1e-33 146.0 84 76.2
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 4.6e-33 144.8 76 78.9
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 4.6e-33 144.8 84 78.6
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 6.1e-33 144.4 107 65.4
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 7.9e-33 144.1 106 64.2
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 7.9e-33 144.1 76 78.9
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.0e-32 143.7 119 61.3
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.0e-32 143.7 83 79.5
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.0e-32 143.7 83 79.5
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 1.0e-32 143.7 83 79.5
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 1.0e-32 143.7 76 80.3
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 1.0e-32 143.7 95 72.6
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.0e-32 143.7 112 67.0
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.3e-32 143.3 77 79.2
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.3e-32 142.5 84 76.2
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 2.3e-32 142.5 79 79.7
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 2.3e-32 142.5 95 72.6
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 3.0e-32 142.1 84 77.4
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 3.0e-32 142.1 109 66.1
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 3.9e-32 141.7 84 75.0
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 6.7e-32 141.0 77 77.9
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 6.7e-32 141.0 72 80.6
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 8.7e-32 140.6 118 59.3
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.1e-31 140.2 84 75.0
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 1.1e-31 140.2 84 73.8
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 1.5e-31 139.8 79 77.2
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 2.5e-31 139.0 84 75.0
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 4.3e-31 138.3 84 73.8
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 9.7e-31 137.1 78 78.2
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 1.3e-30 136.7 82 72.0
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.7e-30 136.3 116 59.5
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 2.8e-30 135.6 78 79.5
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 5.3e-29 131.3 67 82.1
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 5.3e-29 131.3 67 82.1
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 2.0e-28 129.4 86 67.4
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 3.4e-28 128.6 63 85.7
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 3.4e-28 128.6 63 85.7
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 5.9e-28 127.9 102 58.8
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.3e-27 126.7 110 57.3
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 2.2e-27 125.9 130 56.9
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 2.5e-26 122.5 76 71.1
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 5.5e-26 121.3 77 74.0
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.2e-25 120.2 97 60.8
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 2.1e-25 119.4 84 69.0
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 2.1e-25 119.4 84 69.0
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 2.7e-25 119.0 76 69.7
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.4e-24 116.7 77 71.4
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 3.9e-24 115.2 116 57.8
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 8.8e-24 114.0 89 60.7
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.5e-23 113.2 85 62.4
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 8.2e-22 107.5 79 64.6
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 4.1e-21 105.1 85 58.8
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 5.3e-21 104.8 70 65.7
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 9.1e-21 104.0 61 72.1
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 2.6e-20 102.4 77 63.6
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 5.9e-20 101.3 133 43.6
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 8.5e-19 97.4 45 91.1
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 2.1e-17 92.8 117 46.2
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 2.7e-17 92.4 46 84.8
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 8.0e-17 90.9 69 68.1
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 8.0e-17 90.9 125 41.6
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 1.4e-16 90.1 66 62.1
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 2.3e-16 89.4 77 58.4
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 3.9e-16 88.6 84 51.2
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 6.7e-16 87.8 83 54.2
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 5.7e-15 84.7 133 42.1
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 9.7e-15 84.0 107 43.9
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 2.9e-11 72.4 64 56.2
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 4.4e-07 58.5 30 76.7


User provided reference genes

Program Settings