Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g32080 Fragaria vesca HOM05D002804 ORTHO05D029665 1.6e-94 349.4 175 100.0
FAN13G2866 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.1e-69 266.9 174 77.6
FAN18G3080 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.0e-68 262.7 174 76.4
FvH4_5g35000 Fragaria vesca HOM05D002804 ORTHO05D003755 4.2e-66 255.0 174 77.6
FAN18G3994 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.2e-64 248.1 174 74.1
FAN08G1393 Fragaria x ananassa HOM05D002804 ORTHO05D029665 2.6e-60 235.7 174 70.7
FvH4_5g31070 Fragaria vesca HOM05D002804 ORTHO05D003755 3.5e-60 235.3 174 68.4
FvH4_5g35300 Fragaria vesca HOM05D002804 ORTHO05D003755 3.5e-60 235.3 174 70.7
RcHm_v2.0_Chr7g0236031 Rosa chinensis HOM05D002804 ORTHO05D003755 1.0e-56 223.8 174 66.7
RcHm_v2.0_Chr7g0236021 Rosa chinensis HOM05D002804 ORTHO05D003755 1.8e-56 223.0 174 65.5
RcHm_v2.0_Chr7g0235921 Rosa chinensis HOM05D002804 ORTHO05D003755 1.3e-54 216.9 174 63.8
RcHm_v2.0_Chr7g0235901 Rosa chinensis HOM05D002804 ORTHO05D003755 2.8e-54 215.7 174 62.6
FAN08G0149 Fragaria x ananassa HOM05D002804 ORTHO05D029665 2.7e-52 209.1 135 76.3
FvH4_5g35050 Fragaria vesca HOM05D002804 ORTHO05D003755 6.6e-43 177.9 119 75.6
FAN18G0121 Fragaria x ananassa HOM05D002804 ORTHO05D029665 7.2e-42 174.5 174 56.3
RcHm_v2.0_Chr0c11g0499511 Rosa chinensis HOM05D002804 ORTHO05D003755 6.4e-38 161.4 172 50.0
RcHm_v2.0_Chr7g0235871 Rosa chinensis HOM05D002804 ORTHO05D003755 7.0e-37 157.9 154 53.9
FvH4_5g35070 Fragaria vesca HOM05D002804 ORTHO05D029636 2.3e-35 152.9 170 47.1
FAN18G3851 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.0e-35 151.8 171 49.1
RcHm_v2.0_Chr0c11g0499401 Rosa chinensis HOM05D002804 ORTHO05D022637 8.6e-35 151.0 170 50.0
RcHm_v2.0_Chr0c11g0499481 Rosa chinensis HOM05D002804 ORTHO05D003755 3.6e-33 145.6 171 50.3
RcHm_v2.0_Chr7g0236241 Rosa chinensis HOM05D002804 ORTHO05D003755 3.6e-33 145.6 171 50.3
FAN18G1408 Fragaria x ananassa HOM05D002804 ORTHO05D022637 2.6e-31 139.4 173 49.7
RcHm_v2.0_Chr7g0235811 Rosa chinensis HOM05D002804 ORTHO05D003755 7.5e-31 137.9 172 44.8
FvH4_5g35254 Fragaria vesca HOM05D002804 ORTHO05D022637 1.3e-30 137.1 173 49.1
FvH4_5g31080 Fragaria vesca HOM05D002804 ORTHO05D003755 3.7e-30 135.6 170 48.2
FAN18G3590 Fragaria x ananassa HOM05D002804 ORTHO05D003755 6.4e-30 134.8 162 48.1
FvH4_5g35080 Fragaria vesca HOM05D002804 ORTHO05D003755 1.9e-29 133.3 170 46.5
FAN18G3729 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.4e-29 132.9 158 48.7
RcHm_v2.0_Chr7g0235971 Rosa chinensis HOM05D002804 ORTHO05D003755 2.4e-29 132.9 173 46.8
FvH4_5g34950 Fragaria vesca HOM05D002804 ORTHO05D003755 3.2e-29 132.5 161 42.2
FvH4_5g35322 Fragaria vesca HOM05D002804 ORTHO05D003755 7.0e-29 131.3 149 51.0
RcHm_v2.0_Chr7g0236051 Rosa chinensis HOM05D002804 ORTHO05D003755 1.6e-28 130.2 181 44.8
RcHm_v2.0_Chr0c11g0499411 Rosa chinensis HOM05D002804 ORTHO05D003755 7.8e-28 127.9 155 47.7
RcHm_v2.0_Chr0c11g0499461 Rosa chinensis HOM05D002804 ORTHO05D003755 1.7e-27 126.7 145 50.3
RcHm_v2.0_Chr7g0236191 Rosa chinensis HOM05D002804 ORTHO05D022637 1.7e-27 126.7 145 50.3
FvH4_5g31150 Fragaria vesca HOM05D002804 ORTHO05D022637 2.3e-27 126.3 146 48.6
RcHm_v2.0_Chr7g0236331 Rosa chinensis HOM05D002804 ORTHO05D003755 2.1e-25 119.8 172 41.9
FAN08G1215 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.8e-25 119.4 174 39.1
RcHm_v2.0_Chr7g0218341 Rosa chinensis HOM05D002804 ORTHO05D003755 4.7e-25 118.6 134 47.8
FAN04G1488 Fragaria x ananassa HOM05D002804 ORTHO05D003755 8.1e-25 117.9 174 38.5
RcHm_v2.0_Chr7g0218381 Rosa chinensis HOM05D002804 ORTHO05D003755 3.1e-24 115.9 149 43.0
RcHm_v2.0_Chr1g0342791 Rosa chinensis HOM05D002804 ORTHO05D003755 3.4e-23 112.5 160 43.1
FAN04G2366 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.7e-22 110.2 133 48.9
FAN13G2413 Fragaria x ananassa HOM05D002804 ORTHO05D022637 2.9e-22 109.4 119 53.8
FAN18G3114 Fragaria x ananassa HOM05D002804 ORTHO05D003755 2.9e-22 109.4 170 42.9
FAN04G0362 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.7e-22 109.0 115 53.9
FAN18G4091 Fragaria x ananassa HOM05D002804 ORTHO05D003755 8.3e-22 107.8 173 40.5
FAN08G3046 Fragaria x ananassa HOM05D002804 ORTHO05D003755 4.6e-20 102.1 117 50.4
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.8e-20 101.3 141 39.7
FAN13G1580 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.8e-20 101.3 141 39.7
FvH4_5g05670 Fragaria vesca HOM05D002804 ORTHO05D003755 1.0e-19 100.9 141 39.7
RcHm_v2.0_Chr7g0236221 Rosa chinensis HOM05D002804 ORTHO05D341151 5.1e-19 98.6 107 47.7
RcHm_v2.0_Chr7g0193131 Rosa chinensis HOM05D002804 ORTHO05D003755 8.6e-19 97.8 121 42.1
RcHm_v2.0_Chr7g0236171 Rosa chinensis HOM05D002804 ORTHO05D003755 1.1e-18 97.4 172 37.8
RcHm_v2.0_Chr7g0235841 Rosa chinensis HOM05D002804 ORTHO05D025426 3.3e-18 95.9 146 43.8
FAN08G2676 Fragaria x ananassa HOM05D002804 ORTHO05D025426 9.5e-18 94.4 145 40.7
RcHm_v2.0_Chr0c11g0499321 Rosa chinensis HOM05D002804 ORTHO05D029636 1.1e-16 90.9 86 54.7
RcHm_v2.0_Chr0c11g0499391 Rosa chinensis HOM05D002804 ORTHO05D003755 1.1e-16 90.9 151 40.4
RcHm_v2.0_Chr7g0236101 Rosa chinensis HOM05D002804 ORTHO05D029636 1.1e-16 90.9 86 54.7
FAN03G3123 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.8e-16 90.1 163 36.2
RcHm_v2.0_Chr7g0236071 Rosa chinensis HOM05D002804 ORTHO05D003755 1.8e-16 90.1 98 50.0
RcHm_v2.0_Chr7g0235931 Rosa chinensis HOM05D002804 ORTHO05D003755 3.1e-16 89.4 157 36.3
RcHm_v2.0_Chr7g0235851 Rosa chinensis HOM05D002804 ORTHO05D003755 4.4e-15 85.5 91 47.3
FvH4_5g34930 Fragaria vesca HOM05D002804 ORTHO05D025426 7.6e-15 84.7 154 36.4
FvH4_7g08990 Fragaria vesca HOM05D002804 ORTHO05D003755 9.9e-15 84.3 127 38.6
FvH4_5g35060 Fragaria vesca HOM05D002804 ORTHO05D003755 1.7e-14 83.6 130 42.3
RcHm_v2.0_Chr7g0235991 Rosa chinensis HOM05D002804 ORTHO05D003755 2.4e-13 79.7 100 45.0
FAN13G1594 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.2e-12 77.4 145 33.8
FvH4_5g34900 Fragaria vesca HOM05D002804 ORTHO05D025426 2.7e-12 76.3 117 40.2
RcHm_v2.0_Chr4g0419921 Rosa chinensis HOM05D002804 ORTHO05D003755 4.6e-12 75.5 147 36.7
RcHm_v2.0_Chr4g0420021 Rosa chinensis HOM05D002804 ORTHO05D003755 4.6e-12 75.5 147 36.7
FAN02G4619 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.8e-12 74.7 140 36.4
RcHm_v2.0_Chr7g0230641 Rosa chinensis HOM05D002804 ORTHO05D003755 1.3e-11 73.9 70 51.4
MD16G1177800 Malus domestica HOM05D002804 ORTHO05D003755 1.7e-11 73.6 111 36.0
FAN05G3459 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.0e-11 72.8 140 37.1
Lj5g0005878 Lotus japonicus HOM05D002804 ORTHO05D003755 3.9e-11 72.4 107 41.1
RcHm_v2.0_Chr7g0236631 Rosa chinensis HOM05D002804 ORTHO05D029636 5.1e-11 72.0 65 52.3
FvH4_6g08940 Fragaria vesca HOM05D002804 ORTHO05D003755 1.5e-10 70.5 140 35.0
FAN06G4842 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.9e-10 70.1 103 39.8
FAN14G2492 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.9e-10 70.1 140 35.0
RcHm_v2.0_Chr7g0236591 Rosa chinensis HOM05D002804 ORTHO05D003755 3.3e-10 69.3 125 32.8
FvH4_7g08991 Fragaria vesca HOM05D002804 ORTHO05D003755 4.3e-10 68.9 142 35.9
FAN18G0864 Fragaria x ananassa HOM05D002804 ORTHO05D003755 1.6e-09 67.0 173 26.6
FvH4_5g35330 Fragaria vesca HOM05D002804 ORTHO05D003755 2.8e-09 66.2 74 51.4
FvH4_5g35320 Fragaria vesca HOM05D002804 ORTHO05D003755 3.6e-09 65.9 64 54.7
RcHm_v2.0_Chr0c11g0499501 Rosa chinensis HOM05D002804 ORTHO05D003755 1.8e-08 63.5 74 51.4
FAN13G0906 Fragaria x ananassa HOM05D002804 ORTHO05D208549 4.0e-08 62.4 76 42.1
Cpa.g.sc14.234 Carica papaya HOM05D002804 ORTHO05D003755 2.0e-07 60.1 101 36.6
FAN04G3225 Fragaria x ananassa HOM05D002804 ORTHO05D003755 3.4e-07 59.3 110 28.2
RcHm_v2.0_Chr3g0459221 Rosa chinensis HOM05D002804 ORTHO05D003755 5.8e-07 58.5 109 35.8
FAN12G4232 Fragaria x ananassa HOM05D002804 ORTHO05D003755 7.6e-07 58.2 115 33.9
FvH4_4g16590 Fragaria vesca HOM05D002804 ORTHO05D003755 9.9e-07 57.8 115 33.9
FAN04G3233 Fragaria x ananassa HOM05D002804 ORTHO05D025426 1.7e-06 57.0 87 41.4
FAN26G3455 Fragaria x ananassa HOM05D002804 ORTHO05D011158 2.9e-06 56.2 100 32.0
FvH4_5g05700 Fragaria vesca HOM05D002804 ORTHO05D003755 6.4e-06 55.1 119 35.3


User provided reference genes

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