Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 1.3e-208 729.6 382 100.0
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 4.5e-206 721.1 382 98.7
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 5.7e-201 704.1 382 96.9
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.3e-197 692.2 382 95.5
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 3.0e-149 532.3 392 77.0
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 2.7e-102 376.3 429 55.5
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 2.9e-88 329.7 429 52.4
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 2.9e-83 313.2 439 49.7
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 6.6e-72 275.4 452 44.2
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 1.9e-71 273.9 450 46.0
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 1.1e-69 268.1 478 43.3
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 2.3e-69 266.9 440 43.6
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 4.4e-68 262.7 457 43.5
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 2.9e-67 260.0 436 43.8
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 6.0e-65 252.3 430 45.1
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 1.0e-64 251.5 468 43.2
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 7.3e-63 245.4 428 43.7
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 2.8e-62 243.4 463 41.9
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 2.0e-60 237.3 440 41.1
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 1.7e-59 234.2 444 42.6
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 3.7e-59 233.0 437 41.6
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 3.7e-59 233.0 475 41.1
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 6.4e-59 232.3 440 40.7
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 7.1e-58 228.8 442 41.2
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 3.5e-57 226.5 433 40.2
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 7.8e-57 225.3 423 39.5
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 1.0e-56 224.9 411 39.7
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.3e-56 224.6 419 42.7
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.3e-56 224.6 440 40.5
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 1.7e-56 224.2 441 40.1
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 2.3e-56 223.8 475 38.3
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 1.5e-55 221.1 428 42.1
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 4.3e-55 219.5 424 43.2
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 5.6e-55 219.2 437 40.5
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 5.6e-55 219.2 449 41.4
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 2.1e-54 217.2 480 36.2
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 2.1e-54 217.2 482 40.0
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 1.1e-53 214.9 419 40.6
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 1.8e-53 214.2 483 38.3
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 1.2e-52 211.5 423 38.8
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 2.6e-52 210.3 425 40.9
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.7e-51 207.6 441 37.2
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 2.2e-51 207.2 385 41.3
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 3.8e-51 206.5 422 38.6
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 4.9e-51 206.1 426 39.0
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.4e-50 204.5 419 39.9
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.4e-50 204.5 419 39.9
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 1.4e-50 204.5 421 38.7
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 3.5e-49 199.9 449 39.4
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 7.8e-49 198.7 424 39.4
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 1.0e-48 198.4 425 39.3
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 1.3e-48 198.0 426 37.8
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 1.5e-47 194.5 453 36.6
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 1.5e-47 194.5 448 35.7
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 1.3e-46 191.4 452 36.3
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 3.6e-46 189.9 414 35.7
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.8e-45 187.6 422 38.2
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 1.8e-45 187.6 433 36.7
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 2.4e-45 187.2 443 35.9
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 4.0e-45 186.4 203 55.7
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 9.0e-45 185.3 447 36.2
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 2.0e-44 184.1 433 34.9
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 3.4e-44 183.3 414 34.8
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 1.3e-43 181.4 414 34.5
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 2.2e-43 180.6 400 34.8
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 2.2e-43 180.6 400 34.8
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 2.9e-43 180.3 469 35.0
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 2.9e-43 180.3 425 38.4
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 5.4e-42 176.0 426 34.0
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 1.2e-41 174.9 426 34.7
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 3.5e-41 173.3 452 35.2
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 7.9e-41 172.2 424 36.6
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 1.3e-40 171.4 442 37.1
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 6.6e-40 169.1 255 41.2
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 1.9e-39 167.5 432 34.0
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 5.6e-39 166.0 258 41.9
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 5.6e-39 166.0 421 35.2
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 1.3e-38 164.9 423 36.4
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 2.4e-37 160.6 414 34.5
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 3.1e-37 160.2 468 32.5
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 1.3e-35 154.8 436 33.7
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 4.9e-35 152.9 443 33.6
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 2.4e-34 150.6 425 34.1
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 4.2e-34 149.8 439 33.0
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 4.2e-34 149.8 319 39.5
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 7.1e-34 149.1 330 35.2
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 7.1e-34 149.1 406 33.5
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 4.6e-33 146.4 418 32.3
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 6.0e-33 146.0 380 36.3
RcHm_v2.0_Chr7g0225321 Rosa chinensis HOM05D006668 ORTHO05D008252 1.9e-31 141.0 102 76.5
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 6.2e-30 136.0 165 53.9
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.4e-29 134.0 444 32.2
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 5.3e-29 132.9 454 30.8
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 4.5e-28 129.8 322 35.1
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 1.0e-27 128.6 482 31.1
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 1.7e-27 127.9 380 32.1
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.2e-27 127.5 437 32.5
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 3.2e-26 123.6 167 44.3
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 9.3e-26 122.1 264 35.2
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 1.0e-24 118.6 406 31.0
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 2.8e-22 110.5 283 38.9
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 2.8e-22 110.5 145 43.4
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.1e-21 108.6 184 39.1
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 4.2e-18 96.7 222 38.3
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.7e-17 94.0 125 50.4
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.3e-16 90.9 119 51.3
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 9.7e-15 85.5 293 28.7
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 1.8e-08 64.7 427 23.9
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 6.7e-08 62.8 127 39.4
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.1e-07 62.0 235 32.3
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.0e-07 61.2 235 31.9
Sabra07G0109400 Salix brachista HOM05D006668 ORTHO05D008252 2.5e-07 60.8 71 47.9
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 4.3e-07 60.1 258 27.9
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.2e-06 57.8 116 37.1


User provided reference genes

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