Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.6e-56 221.9 116 100.0
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 2.9e-55 218.4 116 97.4
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 6.1e-53 210.7 116 95.7
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.6e-45 186.0 116 79.3
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.6e-45 186.0 109 86.2
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 3.6e-45 184.9 113 82.3
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 2.3e-44 182.2 109 83.5
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 3.0e-44 181.8 117 79.5
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 3.0e-44 181.8 117 76.9
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 3.9e-44 181.4 117 78.6
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 5.1e-44 181.0 116 76.7
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 1.1e-43 179.9 116 81.9
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 4.3e-43 177.9 113 77.9
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 2.2e-42 175.6 115 76.5
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 3.7e-42 174.9 117 75.2
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 4.8e-42 174.5 114 79.8
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 6.3e-42 174.1 117 75.2
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 6.3e-42 174.1 113 77.0
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 1.8e-41 172.6 116 73.3
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 1.8e-41 172.6 116 73.3
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 2.4e-41 172.2 92 97.8
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 2.4e-41 172.2 111 76.6
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 2.4e-41 172.2 116 74.1
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 3.1e-41 171.8 114 75.4
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 3.1e-41 171.8 112 75.9
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 6.9e-41 170.6 88 100.0
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 9.1e-41 170.2 116 73.3
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 1.2e-40 169.9 111 74.8
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.5e-40 169.5 112 75.9
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 2.6e-40 168.7 115 73.9
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 2.6e-40 168.7 117 71.8
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 3.4e-40 168.3 111 73.9
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 3.4e-40 168.3 111 73.9
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 5.9e-40 167.5 118 71.2
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 7.7e-40 167.2 111 73.0
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 7.7e-40 167.2 110 77.3
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 1.0e-39 166.8 116 72.4
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.3e-39 166.4 113 72.6
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.3e-39 166.4 111 72.1
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.3e-39 166.4 111 75.7
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.7e-39 166.0 111 72.1
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 2.9e-39 165.2 113 75.2
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 3.8e-39 164.9 116 72.4
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 6.5e-39 164.1 113 71.7
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 6.5e-39 164.1 113 71.7
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 6.5e-39 164.1 113 71.7
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 6.5e-39 164.1 113 71.7
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 6.5e-39 164.1 113 71.7
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 6.5e-39 164.1 113 70.8
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 6.5e-39 164.1 116 72.4
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 8.5e-39 163.7 108 75.9
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 8.5e-39 163.7 117 72.6
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.1e-38 163.3 113 70.8
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 1.1e-38 163.3 113 71.7
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 1.4e-38 162.9 110 74.5
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.9e-38 162.5 116 70.7
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 1.9e-38 162.5 103 76.7
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.5e-38 162.2 109 74.3
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 2.5e-38 162.2 111 74.8
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 2.5e-38 162.2 110 72.7
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 2.5e-38 162.2 113 70.8
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 3.2e-38 161.8 113 73.5
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 4.2e-38 161.4 115 70.4
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 4.2e-38 161.4 116 69.0
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 5.5e-38 161.0 113 71.7
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 7.2e-38 160.6 111 74.8
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 7.2e-38 160.6 111 71.2
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 7.2e-38 160.6 111 73.9
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 1.2e-37 159.8 111 72.1
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 1.2e-37 159.8 112 73.2
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.6e-37 159.5 113 69.9
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.6e-37 159.5 111 71.2
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 1.6e-37 159.5 116 65.5
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 1.6e-37 159.5 113 70.8
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 4.7e-37 157.9 111 73.0
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 4.7e-37 157.9 109 72.5
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 6.1e-37 157.5 113 70.8
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 6.1e-37 157.5 111 73.0
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 6.1e-37 157.5 98 85.7
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 6.1e-37 157.5 110 73.6
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 7.9e-37 157.1 111 70.3
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 1.0e-36 156.8 116 68.1
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 1.4e-36 156.4 111 71.2
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 3.9e-36 154.8 115 67.8
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 2.0e-35 152.5 111 68.5
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 2.2e-34 149.1 134 60.4
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 2.8e-34 148.7 112 65.2
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 1.8e-33 146.0 86 84.9
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 7.0e-33 144.1 96 72.9
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 1.5e-30 136.3 89 76.4
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.5e-30 136.3 89 77.5
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 2.5e-30 135.6 172 46.5
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 3.2e-30 135.2 105 65.7
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 5.5e-30 134.4 105 64.8
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 7.2e-30 134.0 82 79.3
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 4.7e-29 131.3 89 71.9
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 8.0e-29 130.6 96 69.8
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.0e-28 130.2 89 74.2
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 5.2e-28 127.9 87 72.4
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 8.8e-28 127.1 89 70.8
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 8.8e-28 127.1 80 75.0
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 3.3e-27 125.2 85 74.1
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 9.7e-27 123.6 89 69.7
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.7e-26 122.9 86 68.6
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 1.8e-25 119.4 115 58.3
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.1e-25 118.6 84 72.6
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.6e-24 115.5 79 77.2
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 5.2e-20 101.3 112 48.2
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 8.8e-20 100.5 52 96.2
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.2e-19 100.1 64 81.2
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 2.6e-19 99.0 80 62.5
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 1.3e-15 86.7 108 50.0
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 3.8e-15 85.1 67 64.2
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.0e-15 84.7 54 72.2
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 2.5e-14 82.4 49 79.6
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.6e-13 79.7 116 41.4
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 5.2e-12 74.7 61 62.3
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 2.4e-09 65.9 108 38.0


User provided reference genes

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