Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 3.7e-121 438.3 243 100.0
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 7.6e-98 360.9 277 78.0
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.4e-75 287.0 184 90.8
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 6.5e-65 251.5 189 82.5
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 9.7e-53 211.1 238 62.6
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 9.4e-48 194.5 254 58.3
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 1.9e-40 170.2 225 55.1
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 3.2e-40 169.5 254 48.0
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 9.7e-37 157.9 256 46.1
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 2.4e-35 153.3 261 48.7
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 7.7e-34 148.3 213 52.1
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.0e-33 147.9 215 54.0
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 2.9e-33 146.4 194 52.1
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 8.5e-33 144.8 259 44.4
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 5.5e-32 142.1 256 43.4
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 9.4e-32 141.4 198 46.5
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.2e-31 141.0 253 44.7
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.2e-31 141.0 194 52.6
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 2.1e-31 140.2 215 51.2
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 3.6e-31 139.4 207 52.7
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 3.6e-31 139.4 212 51.4
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 3.6e-31 139.4 222 52.7
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.0e-30 137.9 217 53.5
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 2.3e-30 136.7 181 56.4
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 3.0e-30 136.3 205 51.2
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 3.0e-30 136.3 170 56.5
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 4.0e-30 136.0 159 57.9
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 4.0e-30 136.0 168 48.2
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 4.0e-30 136.0 141 55.3
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 6.8e-30 135.2 208 44.7
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 8.8e-30 134.8 243 44.9
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 2.0e-29 133.7 209 48.8
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 2.0e-29 133.7 160 51.2
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 2.6e-29 133.3 211 43.1
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 3.4e-29 132.9 208 43.8
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 4.4e-29 132.5 268 45.5
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 7.5e-29 131.7 211 45.0
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 9.8e-29 131.3 171 50.9
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 9.8e-29 131.3 216 47.2
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 1.3e-28 131.0 210 50.0
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 1.3e-28 131.0 211 51.7
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 2.8e-28 129.8 162 49.4
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 4.8e-28 129.0 124 54.8
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 4.8e-28 129.0 139 62.6
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 6.3e-28 128.6 251 40.6
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 6.3e-28 128.6 164 55.5
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.4e-27 127.5 252 45.2
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 2.4e-27 126.7 130 56.2
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 3.1e-27 126.3 120 61.7
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 3.1e-27 126.3 263 41.1
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 1.6e-26 124.0 165 55.2
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 2.7e-26 123.2 121 63.6
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 2.7e-26 123.2 210 49.5
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 4.5e-26 122.5 148 50.7
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 5.9e-26 122.1 200 50.0
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 7.7e-26 121.7 176 54.5
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.3e-25 120.9 177 54.2
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 1.3e-25 120.9 186 43.5
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 1.3e-25 120.9 173 53.2
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 2.3e-25 120.2 158 57.6
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 2.9e-25 119.8 212 47.6
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 5.0e-25 119.0 138 50.7
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 6.6e-25 118.6 161 58.4
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 1.1e-24 117.9 232 39.7
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 1.1e-24 117.9 109 57.8
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 3.3e-24 116.3 173 45.7
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 9.5e-24 114.8 125 62.4
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.6e-23 114.0 215 46.0
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 2.8e-23 113.2 161 48.4
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 3.6e-23 112.8 125 50.4
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 3.6e-23 112.8 209 40.7
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 4.7e-23 112.5 124 64.5
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 6.1e-23 112.1 127 56.7
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 6.1e-23 112.1 151 50.3
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 1.0e-22 111.3 167 50.9
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 1.8e-22 110.5 182 42.3
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 3.0e-22 109.8 295 34.2
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 4.0e-22 109.4 167 48.5
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 4.0e-22 109.4 183 50.3
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 5.2e-22 109.0 181 46.4
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 5.2e-22 109.0 184 46.7
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 5.2e-22 109.0 171 45.6
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 6.8e-22 108.6 181 46.4
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 8.9e-22 108.2 180 44.4
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 8.9e-22 108.2 179 47.5
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.5e-21 107.5 170 49.4
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 2.0e-21 107.1 198 43.4
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 2.6e-21 106.7 137 51.8
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 7.5e-21 105.1 154 48.1
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 7.5e-21 105.1 122 61.5
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 1.3e-20 104.4 136 49.3
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 2.8e-20 103.2 154 49.4
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 2.8e-20 103.2 183 44.3
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 4.9e-20 102.4 180 46.1
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 4.9e-20 102.4 70 70.0
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 6.3e-20 102.1 116 65.5
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 8.3e-20 101.7 120 65.0
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 1.8e-19 100.5 69 72.5
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 4.1e-19 99.4 94 73.4
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 2.0e-18 97.1 160 47.5
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 4.5e-18 95.9 278 35.6
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 1.1e-16 91.3 169 49.1
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 1.5e-16 90.9 163 46.6
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 5.6e-16 89.0 155 44.5
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 7.3e-16 88.6 207 35.3
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 4.7e-15 85.9 244 38.1
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 4.0e-14 82.8 68 58.8
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 1.7e-12 77.4 125 45.6
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 1.9e-11 73.9 124 53.2
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 4.1e-11 72.8 123 36.6
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 6.0e-10 68.9 34 94.1
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 1.3e-09 67.8 49 61.2
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 3.0e-09 66.6 190 31.6
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 3.9e-09 66.2 97 43.3
Haze_16651 Corylus avellana HOM05D005915 ORTHO05D007239 6.6e-09 65.5 126 44.4
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 4.0e-06 56.2 46 54.3


User provided reference genes

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