Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 5.7e-68 260.8 129 100.0
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 9.4e-63 243.4 122 98.4
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 9.1e-50 200.3 105 90.5
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 5.2e-45 184.5 97 90.7
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 4.4e-44 181.4 97 88.7
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 7.5e-44 180.6 97 87.6
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 7.5e-44 180.6 97 87.6
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 1.3e-43 179.9 97 85.6
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 1.7e-43 179.5 97 86.6
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.2e-43 179.1 97 86.6
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 2.2e-43 179.1 97 85.6
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 2.2e-43 179.1 97 85.6
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 3.7e-43 178.3 97 86.6
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 4.8e-43 177.9 97 84.5
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 1.1e-42 176.8 99 86.9
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.4e-42 175.6 97 85.6
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 2.4e-42 175.6 98 83.7
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 4.1e-42 174.9 97 85.6
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 4.1e-42 174.9 96 85.4
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 4.1e-42 174.9 97 86.6
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 4.1e-42 174.9 107 78.5
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 1.2e-41 173.3 97 82.5
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 1.2e-41 173.3 97 82.5
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 2.0e-41 172.6 97 82.5
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 2.0e-41 172.6 97 83.5
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 2.0e-41 172.6 97 83.5
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 2.7e-41 172.2 97 78.4
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 5.9e-41 171.0 97 83.5
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 1.0e-40 170.2 97 79.4
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 1.3e-40 169.9 97 80.4
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 1.3e-40 169.9 97 80.4
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 1.7e-40 169.5 97 79.4
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 1.7e-40 169.5 98 81.6
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 1.7e-40 169.5 97 83.5
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 1.7e-40 169.5 97 83.5
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.7e-40 169.5 97 83.5
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 2.2e-40 169.1 98 79.6
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 2.2e-40 169.1 98 79.6
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 2.2e-40 169.1 98 85.7
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 2.2e-40 169.1 100 81.0
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 3.8e-40 168.3 97 81.4
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 5.0e-40 167.9 97 80.4
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 5.0e-40 167.9 105 81.9
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 5.0e-40 167.9 97 80.4
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 5.0e-40 167.9 97 81.4
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 5.0e-40 167.9 97 81.4
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 6.5e-40 167.5 98 85.7
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 6.5e-40 167.5 97 81.4
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 8.5e-40 167.2 97 79.4
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 8.5e-40 167.2 97 80.4
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 8.5e-40 167.2 97 82.5
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 1.1e-39 166.8 98 79.6
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 1.5e-39 166.4 97 78.4
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 1.9e-39 166.0 97 80.4
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 1.9e-39 166.0 97 80.4
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 1.9e-39 166.0 97 80.4
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 2.5e-39 165.6 97 81.4
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 2.5e-39 165.6 97 80.4
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 3.2e-39 165.2 97 80.4
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 3.2e-39 165.2 97 78.4
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 3.2e-39 165.2 97 78.4
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 3.2e-39 165.2 97 78.4
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 4.2e-39 164.9 97 80.4
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 5.5e-39 164.5 98 79.6
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 5.5e-39 164.5 98 80.6
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 7.2e-39 164.1 98 82.7
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 9.4e-39 163.7 97 80.4
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 9.4e-39 163.7 97 79.4
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 1.2e-38 163.3 103 73.8
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 1.6e-38 162.9 98 79.6
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 1.6e-38 162.9 98 79.6
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 1.6e-38 162.9 98 79.6
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 1.6e-38 162.9 98 79.6
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 1.6e-38 162.9 97 79.4
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 2.7e-38 162.2 97 79.4
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 2.7e-38 162.2 97 77.3
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 2.7e-38 162.2 97 76.3
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 2.7e-38 162.2 97 78.4
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 3.6e-38 161.8 98 78.6
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 4.7e-38 161.4 98 78.6
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 4.7e-38 161.4 98 78.6
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 6.1e-38 161.0 98 78.6
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 6.1e-38 161.0 98 78.6
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 6.1e-38 161.0 98 78.6
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 6.1e-38 161.0 99 78.8
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 6.1e-38 161.0 99 78.8
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 8.0e-38 160.6 97 75.3
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 1.0e-37 160.2 98 77.6
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 1.0e-37 160.2 107 73.8
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 1.4e-37 159.8 98 77.6
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 1.4e-37 159.8 98 77.6
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 1.4e-37 159.8 100 76.0
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 1.4e-37 159.8 98 76.5
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 1.4e-37 159.8 96 78.1
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 3.0e-37 158.7 98 76.5
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 5.2e-37 157.9 98 77.6
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 5.2e-37 157.9 122 66.4
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 6.8e-37 157.5 96 79.2
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 6.8e-37 157.5 98 75.5
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 6.8e-37 157.5 106 72.6
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 6.8e-37 157.5 98 77.6
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 6.8e-37 157.5 98 76.5
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 8.8e-37 157.1 98 75.5
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 8.8e-37 157.1 98 77.6
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 2.0e-36 156.0 109 68.8
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 7.5e-36 154.1 96 76.0
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 2.8e-35 152.1 98 72.4
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 2.8e-35 152.1 98 72.4
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 2.8e-35 152.1 98 72.4
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 2.8e-35 152.1 98 72.4
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 2.8e-35 152.1 98 72.4
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 2.8e-35 152.1 98 72.4
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 2.8e-35 152.1 98 72.4
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 8.3e-35 150.6 97 70.1
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 8.3e-35 150.6 98 71.4
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 1.8e-34 149.4 99 69.7
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 1.8e-34 149.4 96 68.8
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 5.4e-34 147.9 99 73.7
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 7.0e-34 147.5 97 69.1
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 2.7e-33 145.6 97 72.2
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 2.7e-33 145.6 93 75.3
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 4.5e-33 144.8 97 67.0
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 4.5e-33 144.8 97 67.0
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 1.3e-32 143.3 97 70.1
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 1.7e-32 142.9 98 69.4
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 1.7e-32 142.9 98 74.5
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 1.7e-32 142.9 100 69.0
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 3.8e-32 141.7 97 71.1
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 5.0e-32 141.4 147 53.1
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 1.2e-30 136.7 88 76.1
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 2.1e-30 136.0 97 70.1
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 5.7e-28 127.9 98 59.2
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 4.9e-27 124.8 78 75.6
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 1.2e-25 120.2 94 58.5
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 1.3e-24 116.7 98 53.1
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 1.4e-21 106.7 156 41.7
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 1.4e-21 106.7 99 52.5
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 1.5e-20 103.2 51 94.1
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 1.1e-18 97.1 51 86.3
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 1.4e-18 96.7 50 88.0
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 4.1e-18 95.1 46 97.8
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 7.0e-18 94.4 52 82.7
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 2.7e-17 92.4 50 82.0
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 1.3e-16 90.1 54 72.2
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 2.8e-14 82.4 47 78.7
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 3.6e-14 82.0 42 92.9
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 8.0e-14 80.9 45 82.2
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 8.9e-13 77.4 59 64.4
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 1.2e-12 77.0 62 59.7
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 2.0e-12 76.3 42 85.7
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 2.0e-12 76.3 46 78.3
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 2.6e-12 75.9 48 70.8
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 1.3e-11 73.6 48 77.1
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 2.2e-11 72.8 41 80.5
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 2.9e-11 72.4 50 74.0
Glyma.08G020100 Glycine max HOM05D001461 ORTHO05D005534 4.9e-11 71.6 51 72.5
MD08G1129600 Malus domestica HOM05D001461 ORTHO05D005534 6.4e-11 71.2 103 45.6
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 1.1e-10 70.5 114 38.6
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 1.0e-08 63.9 120 33.3
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 1.3e-08 63.5 35 85.7
Solyc07g061860.3 Solanum lycopersicum HOM05D001461 ORTHO05D051078 4.7e-06 55.1 29 86.2


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