Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g26820 Fragaria vesca HOM05D004934 ORTHO05D005924 1.5e-54 216.1 119 100.0
FAN04G2654 Fragaria x ananassa HOM05D004934 ORTHO05D005924 1.5e-54 216.1 119 100.0
FAN13G2036 Fragaria x ananassa HOM05D004934 ORTHO05D005924 5.6e-54 214.2 119 99.2
RcHm_v2.0_Chr5g0045641 Rosa chinensis HOM05D004934 ORTHO05D005924 3.9e-47 191.4 119 90.8
RcHm_v2.0_Chr5g0046361 Rosa chinensis HOM05D004934 ORTHO05D005924 7.6e-43 177.2 127 82.7
FAN11G2484 Fragaria x ananassa HOM05D004934 ORTHO05D005924 1.9e-41 172.6 119 83.2
FvH4_3g25100 Fragaria vesca HOM05D004934 ORTHO05D005924 3.2e-41 171.8 119 83.2
Prupe.6G131900 Prunus persica HOM05D004934 ORTHO05D005924 2.3e-39 165.6 119 79.8
Thecc.09G281300 Theobroma cacao HOM05D004934 ORTHO05D005924 6.7e-39 164.1 119 75.6
Cfa010007 Carpinus fangiana HOM05D004934 ORTHO05D005924 8.7e-39 163.7 119 74.8
MD11G1166100 Malus domestica HOM05D004934 ORTHO05D005924 3.7e-37 158.3 115 77.4
Manes.04G003100 Manihot esculenta HOM05D004934 ORTHO05D005924 5.3e-36 154.5 121 75.2
Duzib168G1921 Durio zibethinus HOM05D004934 ORTHO05D005924 6.9e-36 154.1 119 71.4
Gohir.D08G015900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 1.5e-35 152.9 120 72.5
Dinv22836 Davidia involucrata HOM05D004934 ORTHO05D005924 2.6e-35 152.1 120 75.0
Gorai.004G010200 Gossypium raimondii HOM05D004934 ORTHO05D005924 2.6e-35 152.1 120 71.7
PGR102G3359 Punica granatum HOM05D004934 ORTHO05D005924 7.6e-35 150.6 115 71.3
CiPaw.14G099500 Carya illinoinensis HOM05D004934 ORTHO05D005924 1.0e-34 150.2 119 71.4
ClCG01G011970 Citrullus lanatus HOM05D004934 ORTHO05D005924 1.7e-34 149.4 115 73.0
QL01p012137 Quercus lobata HOM05D004934 ORTHO05D005924 1.7e-34 149.4 118 68.6
Hund18761 Selenicereus undatus HOM05D004934 ORTHO05D005924 1.7e-34 149.4 120 70.8
Sed0020870 Sechium edule HOM05D004934 ORTHO05D005924 1.4e-33 146.4 119 72.3
Ciclev10029605m.g Citrus clementina HOM05D004934 ORTHO05D005924 2.5e-33 145.6 119 69.7
Gohir.A08G005600 Gossypium hirsutum HOM05D004934 ORTHO05D005924 5.5e-33 144.4 120 69.2
TWI31G0143 Tripterygium wilfordii HOM05D004934 ORTHO05D005924 5.5e-33 144.4 121 71.1
TAR633G0561 Trochodendron aralioides HOM05D004934 ORTHO05D005924 7.1e-33 144.1 120 70.0
Aqoxy4G02760 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 1.6e-32 142.9 120 68.3
CsaV3_1G014900 Cucumis sativus L. HOM05D004934 ORTHO05D005924 6.0e-32 141.0 120 70.8
GSVIVG01036114001 Vitis vinifera HOM05D004934 ORTHO05D005924 7.9e-32 140.6 117 65.0
Glyma.12G090500 Glycine max HOM05D004934 ORTHO05D005924 1.3e-31 139.8 121 69.4
Actinidia35468 Actinidia chinensis HOM05D004934 ORTHO05D005924 1.8e-31 139.4 121 66.9
CANSAT54G1198 Cannabis sativa HOM05D004934 ORTHO05D005924 1.8e-31 139.4 128 65.6
Medtr4g052910 Medicago truncatula HOM05D004934 ORTHO05D005924 1.8e-31 139.4 120 66.7
Nn2g14177 Nelumbo nucifera HOM05D004934 ORTHO05D005924 1.8e-31 139.4 120 70.0
TPR.G17236 Trifolium pratense HOM05D004934 ORTHO05D005924 3.9e-31 138.3 122 68.0
FAN25G2937 Fragaria x ananassa HOM05D004934 ORTHO05D005924 5.1e-31 137.9 85 89.4
arahy.Tifrunner.gnm1.ann1.Q13MWU Arachis hypogaea HOM05D004934 ORTHO05D005924 6.7e-31 137.5 121 67.8
arahy.Tifrunner.gnm1.ann1.Q2H7V9 Arachis hypogaea HOM05D004934 ORTHO05D005924 6.7e-31 137.5 121 67.8
MD03G1147400 Malus domestica HOM05D004934 ORTHO05D005924 6.7e-31 137.5 115 70.4
ATR0609G030 Amborella trichopoda HOM05D004934 ORTHO05D005924 8.7e-31 137.1 120 66.7
Ca_19413_v3 Cicer arietinum L. HOM05D004934 ORTHO05D005924 1.1e-30 136.7 120 66.7
Phvul.011G095100 Phaseolus vulgaris HOM05D004934 ORTHO05D005924 1.5e-30 136.3 121 67.8
VMungo1127G1656 Vigna mungo HOM05D004934 ORTHO05D005924 1.5e-30 136.3 121 66.9
Dinv42546 Davidia involucrata HOM05D004934 ORTHO05D005924 3.3e-30 135.2 120 66.7
Duzib170G0221 Durio zibethinus HOM05D004934 ORTHO05D005924 3.3e-30 135.2 119 63.9
Glyma.11G182300 Glycine max HOM05D004934 ORTHO05D005924 5.7e-30 134.4 121 68.6
Lalb_Chr03g0028151 Lupinus albus HOM05D004934 ORTHO05D005924 5.7e-30 134.4 122 66.4
THA.LOC104800543 Tarenaya hassleriana HOM05D004934 ORTHO05D005924 5.7e-30 134.4 120 65.8
Cc01_g09040 Coffea canephora HOM05D004934 ORTHO05D005924 1.3e-29 133.3 116 69.0
Lalb_Chr01g0004881 Lupinus albus HOM05D004934 ORTHO05D005924 2.1e-29 132.5 121 65.3
Hma1.2p1_0587F.1_g184270 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 2.8e-29 132.1 115 65.2
Gohir.A09G096200 Gossypium hirsutum HOM05D004934 ORTHO05D005924 6.2e-29 131.0 116 65.5
Nitab4.5_0002914g0100 Nicotiana tabacum HOM05D004934 ORTHO05D005924 6.2e-29 131.0 121 66.9
Sc06g0008770 Simmondsia chinensis HOM05D004934 ORTHO05D005924 8.2e-29 130.6 120 65.0
Lj3g0027260 Lotus japonicus HOM05D004934 ORTHO05D005924 1.1e-28 130.2 121 62.0
Gohir.D09G095900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 1.4e-28 129.8 116 64.7
Oeu031471.1 Olea europaea HOM05D004934 ORTHO05D005924 1.4e-28 129.8 123 65.0
PGSC0003DMG400026356 Solanum tuberosum HOM05D004934 ORTHO05D005924 1.4e-28 129.8 120 63.3
Peaxi162Scf00040g00023 Petunia axillaris HOM05D004934 ORTHO05D005924 1.8e-28 129.4 120 63.3
Potri.009G163100 Populus trichocarpa HOM05D004934 ORTHO05D005924 1.8e-28 129.4 117 65.0
Sabra04G0136300 Salix brachista HOM05D004934 ORTHO05D005924 2.4e-28 129.0 111 67.6
Eucgr.B03844 Eucalyptus grandis HOM05D004934 ORTHO05D005924 3.1e-28 128.6 120 65.0
TAR636G0935 Trochodendron aralioides HOM05D004934 ORTHO05D005924 5.3e-28 127.9 116 62.9
Nitab4.5_0000755g0070 Nicotiana tabacum HOM05D004934 ORTHO05D005924 6.9e-28 127.5 122 63.9
MSTRG.17705 Avicennia marina HOM05D004934 ORTHO05D005924 1.2e-27 126.7 122 61.5
CAN.G1524.5 Capsicum annuum HOM05D004934 ORTHO05D005924 1.2e-27 126.7 120 63.3
Sabra09G0127300 Salix brachista HOM05D004934 ORTHO05D005924 1.2e-27 126.7 109 67.0
Atru.chr3.3218 Acer truncatum HOM05D004934 ORTHO05D005924 1.5e-27 126.3 120 65.0
MSTRG.12371 Avicennia marina HOM05D004934 ORTHO05D005924 1.5e-27 126.3 117 65.0
Nitab4.5_0000227g0280 Nicotiana tabacum HOM05D004934 ORTHO05D005924 1.5e-27 126.3 120 64.2
Nitab4.5_0012586g0010 Nicotiana tabacum HOM05D004934 ORTHO05D005924 1.5e-27 126.3 122 63.1
Solyc11g068510.2 Solanum lycopersicum HOM05D004934 ORTHO05D005924 3.4e-27 125.2 120 60.0
Sopen11g027220 Solanum pennellii HOM05D004934 ORTHO05D005924 3.4e-27 125.2 120 60.0
vmacro14353 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 7.6e-27 124.0 115 60.0
EL10Ac7g15830 Beta vulgaris HOM05D004934 ORTHO05D005924 3.8e-26 121.7 121 61.2
Migut.N02487 Erythranthe guttata HOM05D004934 ORTHO05D005924 5.0e-26 121.3 120 60.8
Psat7g187720 Pisum sativum HOM05D004934 ORTHO05D005924 6.5e-26 120.9 121 60.3
CSS0038235 Camellia sinensis var. sinensis HOM05D004934 ORTHO05D005924 8.4e-26 120.6 105 66.7
AUR62036196 Chenopodium quinoa HOM05D004934 ORTHO05D005924 4.2e-25 118.2 121 61.2
unitig_27.g25034 Utricularia gibba HOM05D004934 ORTHO05D005924 4.2e-25 118.2 115 58.3
AUR62009749 Chenopodium quinoa HOM05D004934 ORTHO05D005924 7.2e-25 117.5 121 60.3
Lsat_1_v5_gn_6_38900 Lactuca sativa HOM05D004934 ORTHO05D005924 6.1e-24 114.4 113 61.1
Potri.004G201700 Populus trichocarpa HOM05D004934 ORTHO05D005924 6.1e-24 114.4 125 60.0
FAN21G3762 Fragaria x ananassa HOM05D004934 ORTHO05D005924 7.9e-24 114.0 78 87.2
Aqoxy2G01124 Aquilegia oxysepala HOM05D004934 ORTHO05D005924 1.3e-23 113.2 122 59.8
ECA233G4139 Erigeron canadensis HOM05D004934 ORTHO05D005924 8.7e-23 110.5 120 57.5
CARHR120400 Cardamine hirsuta HOM05D004934 ORTHO05D005924 1.5e-22 109.8 112 59.8
Zm00001eb369670 Zea mays HOM05D004934 ORTHO05D005924 9.7e-22 107.1 116 56.0
Carub.0004s0847 Capsella rubella HOM05D004934 ORTHO05D005924 2.2e-21 105.9 120 58.3
Peaxi162Scf00757g00422 Petunia axillaris HOM05D004934 ORTHO05D005924 2.2e-21 105.9 115 59.1
Thhalv10017451m.g Eutrema salsugineum HOM05D004934 ORTHO05D005924 4.8e-21 104.8 120 57.5
Sp4g10520 Schrenkiella parvula HOM05D004934 ORTHO05D005924 1.1e-20 103.6 121 56.2
A07p18350 Brassica napus HOM05D004934 ORTHO05D005924 1.4e-20 103.2 121 58.7
AL4G22570 Arabidopsis lyrata HOM05D004934 ORTHO05D005924 1.8e-20 102.8 121 57.0
PSO339G6001 Papaver somniferum HOM05D004934 ORTHO05D005924 1.8e-20 102.8 119 53.8
PSO801G0293 Papaver somniferum HOM05D004934 ORTHO05D005924 2.4e-20 102.4 119 52.9
Zm00001eb151060 Zea mays HOM05D004934 ORTHO05D005924 2.4e-20 102.4 116 53.4
AT2G27730 Arabidopsis thaliana HOM05D004934 ORTHO05D005924 3.1e-20 102.1 121 58.7
Rhsim13G0112500 Rhododendron simsii HOM05D004934 ORTHO05D005924 4.1e-20 101.7 156 47.4
BcaB06g28164 Brassica carinata HOM05D004934 ORTHO05D005924 5.3e-20 101.3 127 55.1
HanXRQChr13g0397481 Helianthus annuus HOM05D004934 ORTHO05D005924 6.9e-20 100.9 115 53.9
BraA07t29551Z Brassica rapa HOM05D004934 ORTHO05D005924 9.0e-20 100.5 121 57.0
SalBow3G2207 Salvia bowleyana HOM05D004934 ORTHO05D005924 1.5e-19 99.8 122 52.5
Aa31LG5G8260 Aethionema arabicum HOM05D004934 ORTHO05D005924 2.6e-19 99.0 120 53.3
BcaC02g08235 Brassica carinata HOM05D004934 ORTHO05D005924 2.6e-19 99.0 121 53.7
C04p56900 Brassica napus HOM05D004934 ORTHO05D005924 2.6e-19 99.0 121 53.7
BolC4t27225H Brassica oleracea HOM05D004934 ORTHO05D005924 2.6e-19 99.0 121 53.7
Lsat_1_v5_gn_2_59421 Lactuca sativa HOM05D004934 ORTHO05D005924 2.6e-19 99.0 115 54.8
A04p21090 Brassica napus HOM05D004934 ORTHO05D005924 4.5e-19 98.2 120 56.7
BraA04t17678Z Brassica rapa HOM05D004934 ORTHO05D005924 4.5e-19 98.2 120 56.7
Oeu035567.1 Olea europaea HOM05D004934 ORTHO05D005924 5.9e-19 97.8 121 55.4
BcaC02g10898 Brassica carinata HOM05D004934 ORTHO05D005924 7.7e-19 97.4 121 54.5
C04p23930 Brassica napus HOM05D004934 ORTHO05D005924 7.7e-19 97.4 121 54.5
BolC4t23886H Brassica oleracea HOM05D004934 ORTHO05D005924 7.7e-19 97.4 121 54.5
PSO339G2388 Papaver somniferum HOM05D004934 ORTHO05D005924 7.7e-19 97.4 115 55.7
CDE12G0371 Ceratophyllum demersum HOM05D004622 ORTHO05D005431 1.7e-18 96.3 117 51.3
BcaB02g10110 Brassica carinata HOM05D004934 ORTHO05D005924 2.2e-18 95.9 121 52.9
Gorai.009G084700 Gossypium raimondii HOM05D004934 ORTHO05D005924 2.9e-18 95.5 80 68.8
SGA_v2.0_scaffold295G47520 Striga asiatica HOM05D004934 ORTHO05D005924 2.9e-18 95.5 122 52.5
Gohir.D05G082900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 1.1e-17 93.6 80 67.5
HanXRQChr11g0324151 Helianthus annuus HOM05D004934 ORTHO05D005924 1.1e-17 93.6 118 52.5
PSO384G4162 Papaver somniferum HOM05D004934 ORTHO05D005924 1.9e-17 92.8 111 54.1
Gohir.A05G080000 Gossypium hirsutum HOM05D004934 ORTHO05D005924 7.2e-17 90.9 80 66.2
MBI05_g05303_MAGBIO Magnolia biondii HOM05D004934 ORTHO05D005924 9.4e-17 90.5 123 52.8
DCAR_010342 Daucus carota HOM05D004934 ORTHO05D005924 6.1e-16 87.8 91 59.3
CDE04G1608 Ceratophyllum demersum HOM05D004934 ORTHO05D005924 6.7e-15 84.3 125 46.4
Pp3c1_22500 Physcomitrium patens HOM05D004934 ORTHO05D005924 8.8e-15 84.0 114 48.2
SGA_v2.0_scaffold177G39414 Striga asiatica HOM05D004934 ORTHO05D005924 1.5e-14 83.2 123 51.2
BcaC02g10901 Brassica carinata HOM05D004934 ORTHO05D005924 3.3e-14 82.0 108 52.8
DCAR_030570 Daucus carota HOM05D004934 ORTHO05D005924 3.3e-14 82.0 69 69.6
ECA238G4733 Erigeron canadensis HOM05D004934 ORTHO05D005924 1.4e-12 76.6 115 44.3
Os08g0559000 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 1.4e-12 76.6 115 42.6
HPP92_003219 Vanilla planifolia HOM05D004934 ORTHO05D005924 1.4e-12 76.6 81 58.0
Cpa.g.sc32.36 Carica papaya HOM05D004934 ORTHO05D005924 6.9e-12 74.3 75 60.0
Zm00001eb343400 Zea mays HOM05D004934 ORTHO05D005924 6.9e-12 74.3 85 50.6
Zm00001eb416000 Zea mays HOM05D004934 ORTHO05D005924 2.0e-11 72.8 85 50.6
MELO3C004698.2 Cucumis melo HOM05D004934 ORTHO05D005924 5.9e-11 71.2 100 47.0
Nn6g34871 Nelumbo nucifera HOM05D004934 ORTHO05D005924 1.7e-10 69.7 57 73.7
Hma1.2p1_0587F.1_g184260 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 2.9e-10 68.9 68 57.4
Hma1.2p1_3516F.1_g336514 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 2.9e-10 68.9 68 57.4
vmacro03322 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 6.5e-10 67.8 197 33.5
Os09g0568900 Oryza sativa ssp. japonica HOM05D004934 ORTHO05D005924 1.2e-08 63.5 82 53.7
Hma1.2p1_0413F.1_g147325 Hydrangea macrophylla HOM05D004934 ORTHO05D005924 7.9e-08 60.8 69 50.7
Pp3c14_2790 Physcomitrium patens HOM05D004934 ORTHO05D005924 1.8e-07 59.7 111 40.5
CBR_g38024 Chara braunii HOM05D004934 ORTHO05D005924 1.1e-06 57.0 115 38.3
AagrBONN_evm.TU.Sc2ySwM_228.2259 Anthoceros agrestis HOM05D004934 ORTHO05D005924 1.5e-06 56.6 130 36.2
SEGI_07969 Sequoiadendron giganteum HOM05D004934 ORTHO05D005924 5.7e-06 54.7 36 75.0


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