Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 0.0e+00 1605.9 864 100.0
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 0.0e+00 1541.9 884 95.5
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 0.0e+00 1517.3 888 93.5
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 0.0e+00 1501.9 888 93.0
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 0.0e+00 1330.9 955 79.9
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 6.3e-304 1047.3 817 75.2
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 3.3e-297 1025.0 804 75.5
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 2.0e-193 680.2 814 54.1
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 1.4e-183 647.5 833 50.9
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 2.4e-93 347.8 815 36.7
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 4.2e-90 337.0 528 45.6
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 2.1e-89 334.7 850 35.9
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 8.7e-88 329.3 861 35.1
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 1.3e-83 315.5 865 34.2
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 3.8e-83 313.9 816 34.1
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 2.4e-82 311.2 802 35.3
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.6e-81 308.5 873 33.9
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 2.3e-80 304.7 916 32.4
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 4.0e-77 293.9 833 32.3
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 4.0e-77 293.9 804 33.2
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 7.1e-74 283.1 819 32.4
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 1.2e-73 282.3 868 32.4
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 6.0e-73 280.0 815 33.0
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.5e-71 275.4 836 33.3
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 1.3e-70 272.3 983 31.0
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 3.1e-69 267.7 847 32.2
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 2.0e-68 265.0 808 32.5
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 3.4e-68 264.2 815 32.9
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 7.7e-68 263.1 847 31.5
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 5.0e-67 260.4 827 32.0
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 7.2e-66 256.5 828 31.9
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 3.9e-64 250.8 799 32.0
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 8.8e-64 249.6 811 31.4
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 7.4e-63 246.5 833 30.6
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 1.4e-61 242.3 835 31.6
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 6.9e-61 240.0 786 31.0
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 9.1e-61 239.6 441 40.6
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 2.6e-60 238.0 793 30.3
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.7e-59 235.3 811 31.4
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 3.6e-57 227.6 846 29.4
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 4.4e-55 220.7 843 29.7
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 2.0e-52 211.8 800 29.9
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 3.5e-52 211.1 895 29.5
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 3.8e-51 207.6 808 29.8
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 4.7e-49 200.7 834 29.6
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 6.1e-49 200.3 833 30.7
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 3.0e-48 198.0 831 28.3
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 8.8e-48 196.4 852 28.8
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 1.5e-47 195.7 830 28.0
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 2.2e-46 191.8 926 27.1
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 5.3e-45 187.2 847 29.5
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 1.0e-43 183.0 808 30.2
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 1.0e-43 183.0 526 33.1
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 3.8e-43 181.0 889 27.2
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 1.1e-42 179.5 850 28.6
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 1.1e-42 179.5 847 28.7
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 1.9e-42 178.7 868 27.6
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 2.1e-41 175.3 778 27.0
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 2.3e-40 171.8 874 27.2
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 2.3e-40 171.8 973 26.9
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.3e-38 166.0 883 28.0
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 3.7e-38 164.5 801 26.7
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 3.1e-37 161.4 933 25.9
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.2e-36 159.5 272 40.4
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 6.5e-35 153.7 877 27.5
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 5.5e-34 150.6 922 25.5
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 5.5e-34 150.6 539 29.3
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 9.4e-34 149.8 843 26.5
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 1.0e-32 146.4 844 27.5
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 1.4e-32 146.0 857 27.4
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 1.4e-32 146.0 843 27.5
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 4.0e-32 144.4 924 27.5
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 8.8e-32 143.3 916 26.4
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 1.1e-29 136.3 912 26.2
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 2.4e-29 135.2 847 27.2
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 4.1e-29 134.4 839 27.4
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 7.7e-28 130.2 799 26.8
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 2.3e-27 128.6 164 51.8
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 5.0e-27 127.5 582 27.1
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 8.6e-27 126.7 255 38.8
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 4.2e-26 124.4 885 26.8
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 5.5e-26 124.0 437 28.4
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 3.6e-25 121.3 269 33.8
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 4.0e-24 117.9 884 25.5
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 5.2e-24 117.5 147 49.7
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 5.2e-24 117.5 885 25.8
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 2.8e-22 111.7 127 52.8
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 3.1e-21 108.2 148 45.9
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 4.1e-21 107.8 424 30.0
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.2e-20 106.3 128 49.2
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 2.7e-20 105.1 306 33.7
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.7e-20 105.1 817 23.0
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 3.5e-20 104.8 200 39.0
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 4.5e-20 104.4 230 34.8
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 5.0e-19 100.9 784 23.7
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 9.5e-18 96.7 795 23.1
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 1.4e-16 92.8 76 64.5
FAN18G0578 Fragaria x ananassa HOM05D007489 ORTHO05D045794 1.8e-16 92.4 108 53.7
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 5.2e-16 90.9 806 23.9
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 1.2e-15 89.7 125 47.2
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 1.2e-15 89.7 145 38.6
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 9.8e-15 86.7 154 38.3
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 1.3e-14 86.3 123 43.9
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 1.3e-14 86.3 141 41.1
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 6.0e-12 77.4 69 50.7
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 8.6e-11 73.6 82 45.1
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 2.5e-10 72.0 777 25.1
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 3.3e-10 71.6 857 25.1
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 4.3e-10 71.2 65 61.5
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 1.2e-09 69.7 99 42.4
FvH4_5g25370 Fragaria vesca HOM05D007489 ORTHO05D045794 5.2e-08 64.3 54 61.1
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 8.9e-08 63.5 60 51.7
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.2e-07 63.2 60 51.7
Eucgr.D00548 Eucalyptus grandis HOM05D007489 ORTHO05D008037 6.4e-06 57.4 85 48.2


User provided reference genes

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