Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g24130 Fragaria vesca HOM05D000132 ORTHO05D198246 1.8e-59 234.6 196 100.0
FAN18G0852 Fragaria x ananassa HOM05D000132 ORTHO05D000058 4.5e-42 176.8 91 98.9
RcHm_v2.0_Chr7g0213751 Rosa chinensis HOM05D000132 ORTHO05D000058 2.6e-34 151.0 93 79.6
RcHm_v2.0_Chr7g0213801 Rosa chinensis HOM05D000132 ORTHO05D000058 1.9e-32 144.8 93 78.5
FAN13G2505 Fragaria x ananassa HOM05D004914 ORTHO05D006512 2.2e-28 131.3 93 76.3
FAN04G2339 Fragaria x ananassa HOM05D000132 ORTHO05D000058 4.7e-23 113.6 62 96.8
RcHm_v2.0_Chr7g0213681 Rosa chinensis HOM05D000132 ORTHO05D000058 7.7e-18 96.3 93 55.9
RcHm_v2.0_Chr5g0021681 Rosa chinensis HOM05D000132 ORTHO05D000058 5.5e-16 90.1 96 52.1
RcHm_v2.0_Chr5g0021711 Rosa chinensis HOM05D000132 ORTHO05D000058 5.2e-14 83.6 96 47.9
RcHm_v2.0_Chr5g0023981 Rosa chinensis HOM05D000132 ORTHO05D000058 1.4e-11 75.5 100 46.0
RcHm_v2.0_Chr3g0493891 Rosa chinensis HOM05D000132 ORTHO05D000058 1.8e-11 75.1 100 49.0
RcHm_v2.0_Chr4g0412541 Rosa chinensis HOM05D000132 ORTHO05D000058 2.4e-11 74.7 99 45.5
RcHm_v2.0_Chr4g0403001 Rosa chinensis HOM05D000132 ORTHO05D000058 4.1e-11 73.9 98 49.0
RcHm_v2.0_Chr5g0023721 Rosa chinensis HOM05D000132 ORTHO05D000058 4.1e-11 73.9 100 45.0
FvH4_4g04540 Fragaria vesca HOM05D000132 ORTHO05D000058 9.1e-11 72.8 101 42.6
FAN22G1756 Fragaria x ananassa HOM05D000132 ORTHO05D000058 9.1e-11 72.8 101 42.6
FAN21G2134 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.2e-10 72.4 100 48.0
RcHm_v2.0_Chr3g0483131 Rosa chinensis HOM05D000132 ORTHO05D000058 1.2e-10 72.4 99 43.4
FAN08G2365 Fragaria x ananassa HOM05D000132 ORTHO05D000058 2.0e-10 71.6 97 43.3
FvH4_3g14340 Fragaria vesca HOM05D000132 ORTHO05D000058 4.5e-10 70.5 99 47.5
RcHm_v2.0_Chr5g0024241 Rosa chinensis HOM05D000132 ORTHO05D000058 5.9e-10 70.1 95 46.3
FAN08G1381 Fragaria x ananassa HOM05D000132 ORTHO05D000058 7.7e-10 69.7 99 43.4
RcHm_v2.0_Chr4g0409921 Rosa chinensis HOM05D000132 ORTHO05D000058 7.7e-10 69.7 98 42.9
FAN16G2601 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.7e-09 68.6 99 47.5
FAN16G2837 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.7e-09 68.6 99 47.5
RcHm_v2.0_Chr7g0239161 Rosa chinensis HOM05D000132 ORTHO05D000058 1.7e-09 68.6 99 43.4
FAN08G2600 Fragaria x ananassa HOM05D000132 ORTHO05D000058 2.2e-09 68.2 99 45.5
Prupe.4G129000 Prunus persica HOM05D000132 ORTHO05D000058 2.9e-09 67.8 96 44.8
RcHm_v2.0_Chr5g0023521 Rosa chinensis HOM05D000132 ORTHO05D000058 2.9e-09 67.8 102 45.1
FAN16G2910 Fragaria x ananassa HOM05D000132 ORTHO05D000058 3.8e-09 67.4 99 40.4
FvH4_5g37510 Fragaria vesca HOM05D000132 ORTHO05D000058 5.0e-09 67.0 100 43.0
Prupe.4G268100 Prunus persica HOM05D000132 ORTHO05D000058 5.0e-09 67.0 94 42.6
FAN04G2878 Fragaria x ananassa HOM05D000132 ORTHO05D000058 6.5e-09 66.6 99 45.5
FAN08G1442 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.5e-08 65.5 99 44.4
Prupe.4G128800 Prunus persica HOM05D000132 ORTHO05D000058 1.5e-08 65.5 96 44.8
FAN17G1752 Fragaria x ananassa HOM05D000132 ORTHO05D000058 5.5e-08 63.5 93 43.0
QL04p018908 Quercus lobata HOM05D000132 ORTHO05D000058 5.5e-08 63.5 98 43.9
CiPaw.10G020800 Carya illinoinensis HOM05D000132 ORTHO05D000058 7.2e-08 63.2 101 43.6
CiPaw.10G021000 Carya illinoinensis HOM05D000132 ORTHO05D127709 7.2e-08 63.2 100 43.0
RcHm_v2.0_Chr7g0213791 Rosa chinensis HOM05D000132 ORTHO05D000058 7.2e-08 63.2 36 80.6
Prupe.2G064900 Prunus persica HOM05D000132 ORTHO05D000058 1.2e-07 62.4 94 41.5
RcHm_v2.0_Chr7g0239771 Rosa chinensis HOM05D000132 ORTHO05D000058 1.2e-07 62.4 98 48.0
FAN18G0109 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.6e-07 62.0 97 44.3
Prupe.3G115800 Prunus persica HOM05D000132 ORTHO05D000058 2.7e-07 61.2 95 42.1
QL09p021866 Quercus lobata HOM05D000132 ORTHO05D000058 2.7e-07 61.2 101 42.6
QL12p036657 Quercus lobata HOM05D000132 ORTHO05D000058 2.7e-07 61.2 102 41.2
CiPaw.10G020900 Carya illinoinensis HOM05D000132 ORTHO05D000058 4.7e-07 60.5 100 42.0
QL09p050184 Quercus lobata HOM05D000132 ORTHO05D000058 4.7e-07 60.5 100 40.0
FvH4_5g37790 Fragaria vesca HOM05D000132 ORTHO05D000058 6.1e-07 60.1 100 42.0
FAN25G3225 Fragaria x ananassa HOM05D000132 ORTHO05D000058 6.1e-07 60.1 98 45.9
CiPaw.12G014600 Carya illinoinensis HOM05D000132 ORTHO05D000058 8.0e-07 59.7 95 38.9
RcHm_v2.0_Chr7g0239791 Rosa chinensis HOM05D000132 ORTHO05D000058 8.0e-07 59.7 97 46.4
CiPaw.14G079600 Carya illinoinensis HOM05D000132 ORTHO05D000058 1.0e-06 59.3 102 45.1
FAN16G3584 Fragaria x ananassa HOM05D000132 ORTHO05D000058 1.4e-06 58.9 98 44.9
RcHm_v2.0_Chr7g0233271 Rosa chinensis HOM05D000132 ORTHO05D000058 2.3e-06 58.2 100 44.0
FAN08G0145 Fragaria x ananassa HOM05D000132 ORTHO05D000058 3.0e-06 57.8 98 44.9
RcHm_v2.0_Chr7g0221461 Rosa chinensis HOM05D000132 ORTHO05D000058 3.0e-06 57.8 97 44.3
Prupe.1G510800 Prunus persica HOM05D000132 ORTHO05D000058 4.0e-06 57.4 96 40.6
Dinv23935 Davidia involucrata HOM05D000132 ORTHO05D000058 5.2e-06 57.0 99 39.4
Prupe.3G116000 Prunus persica HOM05D000132 ORTHO05D000058 5.2e-06 57.0 97 41.2
TPR.G31916 Trifolium pratense HOM05D000132 ORTHO05D000058 5.2e-06 57.0 101 34.7
QL09p018502 Quercus lobata HOM05D000132 ORTHO05D000058 6.8e-06 56.6 97 39.2
FAN08G0987 Fragaria x ananassa HOM05D000132 ORTHO05D000058 8.8e-06 56.2 96 40.6
FAN18G0631 Fragaria x ananassa HOM05D000132 ORTHO05D000058 8.8e-06 56.2 99 40.4


User provided reference genes

Program Settings