Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.1e-81 305.8 175 100.0
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.1e-81 305.8 175 100.0
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.1e-81 305.8 175 100.0
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 8.5e-75 283.9 170 97.1
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 9.7e-71 270.4 173 90.8
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 3.8e-51 205.3 177 71.8
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 5.2e-48 194.9 174 70.1
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 2.9e-38 162.5 163 62.6
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 6.4e-38 161.4 163 62.0
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 3.5e-36 155.6 173 57.8
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 5.9e-36 154.8 175 56.6
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 5.0e-35 151.8 168 56.0
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 1.6e-33 146.7 168 55.4
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 4.7e-33 145.2 173 54.3
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 4.7e-33 145.2 175 54.9
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 4.7e-33 145.2 166 59.6
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 1.0e-32 144.1 175 52.0
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 1.4e-32 143.7 175 57.7
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 1.8e-32 143.3 163 58.3
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 8.9e-32 141.0 177 55.9
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.5e-31 140.2 175 56.6
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 2.6e-31 139.4 173 56.6
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 4.4e-31 138.7 175 55.4
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 1.7e-30 136.7 174 54.0
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 1.7e-30 136.7 173 54.3
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 2.9e-30 136.0 173 46.8
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 4.1e-29 132.1 174 51.7
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 2.0e-28 129.8 163 54.6
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 4.6e-28 128.6 175 56.0
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 6.0e-28 128.3 167 54.5
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 7.8e-28 127.9 167 54.5
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 1.0e-27 127.5 171 52.6
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.7e-27 126.7 170 54.7
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 2.3e-27 126.3 174 57.5
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 5.0e-27 125.2 175 49.1
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 6.6e-27 124.8 168 50.6
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 6.6e-27 124.8 175 49.7
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.1e-26 124.0 177 44.6
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.5e-26 123.6 165 50.3
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 3.3e-26 122.5 173 49.7
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 4.3e-26 122.1 177 50.3
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 1.6e-25 120.2 166 51.8
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.6e-25 120.2 173 49.1
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 2.1e-25 119.8 175 45.7
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 3.6e-25 119.0 132 67.4
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 4.7e-25 118.6 168 50.0
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 8.1e-25 117.9 150 50.7
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 1.1e-24 117.5 175 46.9
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 1.8e-24 116.7 175 49.7
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 4.0e-24 115.5 168 47.6
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 5.2e-24 115.2 173 47.4
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 5.2e-24 115.2 168 49.4
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 6.8e-24 114.8 145 55.2
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 6.8e-24 114.8 146 56.8
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 8.9e-24 114.4 175 52.6
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.2e-23 114.0 174 50.0
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 1.2e-23 114.0 168 48.8
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 1.5e-23 113.6 175 48.0
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 1.5e-23 113.6 174 46.6
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 4.4e-23 112.1 145 53.8
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 5.8e-23 111.7 145 53.8
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 5.8e-23 111.7 150 57.3
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 7.5e-23 111.3 145 53.8
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 9.8e-23 110.9 145 54.5
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 9.8e-23 110.9 144 54.2
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 1.3e-22 110.5 145 53.8
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 1.7e-22 110.2 145 53.1
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 1.7e-22 110.2 165 52.1
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 2.2e-22 109.8 174 47.1
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 2.2e-22 109.8 178 46.6
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 2.2e-22 109.8 154 51.3
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 2.9e-22 109.4 174 50.6
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.7e-22 109.0 168 47.6
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 4.9e-22 108.6 117 65.0
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 4.9e-22 108.6 150 55.3
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 4.9e-22 108.6 173 46.8
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 4.9e-22 108.6 150 57.3
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 6.4e-22 108.2 150 56.7
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.1e-21 107.5 174 50.0
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.4e-21 107.1 174 50.0
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.4e-21 107.1 147 55.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 5.4e-21 105.1 146 52.1
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 9.2e-21 104.4 99 70.7
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 2.1e-20 103.2 131 57.3
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 7.8e-20 101.3 173 49.7
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 5.1e-19 98.6 110 63.6
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 3.3e-18 95.9 172 44.8
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 3.3e-18 95.9 107 65.4
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 9.5e-18 94.4 175 44.6
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 4.7e-17 92.0 78 75.6
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 1.4e-16 90.5 174 46.0
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.8e-16 90.1 88 72.7
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 2.0e-15 86.7 78 83.3
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 2.6e-15 86.3 78 78.2
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 2.6e-15 86.3 148 41.9
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 4.4e-15 85.5 87 72.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.7e-14 83.6 116 56.9
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 3.7e-14 82.4 183 42.6
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 4.9e-14 82.0 150 42.7
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 5.4e-13 78.6 85 70.6
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 9.2e-13 77.8 129 41.9
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 2.1e-12 76.6 80 72.5
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 6.0e-12 75.1 169 37.9


User provided reference genes

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