Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 2.0e-70 269.2 161 100.0
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.0e-70 269.2 161 100.0
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.8e-69 265.0 161 98.1
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 6.0e-67 257.7 163 96.9
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 7.8e-67 257.3 163 96.9
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.9e-65 252.7 164 96.3
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 1.4e-52 209.9 172 73.3
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 5.8e-46 188.0 169 67.5
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 3.3e-33 145.6 169 64.5
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 3.3e-33 145.6 174 67.2
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 7.4e-33 144.4 171 56.7
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 1.3e-32 143.7 162 59.9
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 2.4e-31 139.4 164 57.9
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 2.0e-30 136.3 170 51.8
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 3.4e-30 135.6 174 60.3
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 4.5e-30 135.2 175 50.9
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 4.5e-30 135.2 175 60.6
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 5.9e-30 134.8 171 63.7
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 5.0e-29 131.7 165 50.9
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 8.5e-29 131.0 166 51.8
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 8.5e-29 131.0 167 52.7
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 3.2e-28 129.0 168 54.2
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 3.2e-28 129.0 164 58.5
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 9.3e-28 127.5 165 60.6
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 9.3e-28 127.5 164 49.4
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 1.6e-27 126.7 170 50.0
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 2.1e-27 126.3 168 50.6
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 2.1e-27 126.3 164 49.4
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 3.6e-27 125.6 171 49.7
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.6e-27 125.6 139 51.8
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 4.6e-27 125.2 165 50.3
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 7.9e-27 124.4 175 57.1
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.8e-26 123.2 164 56.7
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.8e-26 123.2 169 52.1
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 5.1e-26 121.7 179 48.0
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 6.7e-26 121.3 168 46.4
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 1.1e-25 120.6 168 49.4
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.1e-25 120.6 213 43.2
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.5e-25 120.2 177 49.2
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.9e-25 119.8 178 48.9
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.9e-25 119.8 166 49.4
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.9e-25 119.8 166 49.4
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.9e-25 119.8 166 48.8
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 3.3e-25 119.0 176 46.6
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 3.3e-25 119.0 175 56.6
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 7.4e-25 117.9 134 58.2
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.3e-24 117.1 185 47.6
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 1.7e-24 116.7 173 46.2
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.7e-24 116.7 174 48.3
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 2.2e-24 116.3 170 46.5
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 2.2e-24 116.3 176 46.0
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 2.2e-24 116.3 169 48.5
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.8e-24 115.9 170 59.4
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 6.3e-24 114.8 168 48.8
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 8.2e-24 114.4 170 47.1
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.4e-23 113.6 166 48.8
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 2.4e-23 112.8 164 48.8
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 2.4e-23 112.8 164 48.8
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 3.1e-23 112.5 173 48.6
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 4.1e-23 112.1 169 45.6
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 4.1e-23 112.1 119 68.1
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 4.1e-23 112.1 176 43.8
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 5.3e-23 111.7 158 55.1
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 6.9e-23 111.3 174 46.6
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 9.1e-23 110.9 164 48.8
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 1.2e-22 110.5 161 47.2
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.2e-22 110.5 178 43.3
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.5e-22 110.2 176 43.2
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 2.0e-22 109.8 171 46.8
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 2.6e-22 109.4 171 46.8
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 2.6e-22 109.4 171 46.8
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 4.5e-22 108.6 176 54.0
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 5.9e-22 108.2 162 45.7
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 7.7e-22 107.8 172 45.9
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 7.7e-22 107.8 172 45.9
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.0e-21 107.5 170 48.2
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 1.0e-21 107.5 172 48.3
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 1.7e-21 106.7 142 64.8
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.7e-21 106.7 176 42.6
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 2.9e-21 105.9 169 46.7
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 2.9e-21 105.9 170 45.3
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.4e-20 103.6 175 41.7
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 1.9e-20 103.2 61 83.6
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 1.9e-20 103.2 61 83.6
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 2.5e-20 102.8 175 44.0
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 3.2e-20 102.4 137 50.4
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 3.2e-20 102.4 95 56.8
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 3.2e-20 102.4 137 51.8
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 2.1e-19 99.8 181 40.3
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 2.7e-19 99.4 139 54.7
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 6.1e-19 98.2 171 40.9
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.0e-18 97.4 192 39.1
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.4e-18 97.1 163 41.7
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 1.8e-18 96.7 167 40.7
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 6.7e-18 94.7 91 56.0
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 2.0e-17 93.2 140 47.9
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 5.7e-17 91.7 91 54.9
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.7e-16 90.1 55 81.8
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 6.3e-16 88.2 143 44.1
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 1.1e-15 87.4 149 40.3
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 5.9e-14 81.6 164 49.4
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 1.3e-13 80.5 152 52.0
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 3.8e-13 79.0 171 48.0
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 6.5e-13 78.2 63 61.9
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 1.2e-11 73.9 60 56.7
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 3.6e-11 72.4 130 50.8
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 2.3e-10 69.7 60 56.7
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 3.0e-10 69.3 76 48.7
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 3.9e-10 68.9 60 55.0
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 8.8e-10 67.8 33 93.9
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 2.6e-09 66.2 138 40.6
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 5.7e-09 65.1 132 40.2
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.8e-08 62.8 79 45.6
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.1e-07 60.8 68 47.1
MCO01G451 Micromonas commoda HOM05D006875 ORTHO05D008416 5.9e-06 55.1 60 48.3


User provided reference genes

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