Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g15972 Fragaria vesca HOM05D007222 ORTHO05D035251 1.6e-120 436.0 205 100.0
FAN18G1465 Fragaria x ananassa HOM05D007222 ORTHO05D035251 1.9e-105 386.0 184 98.9
MD06G1179300 Malus domestica HOM05D007222 ORTHO05D010132 2.0e-22 110.2 175 35.4
Prupe.5G179400 Prunus persica HOM05D007222 ORTHO05D010132 2.4e-20 103.2 175 40.0
FAN03G1025 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.1e-20 102.4 176 34.1
FvH4_7g13450 Fragaria vesca HOM05D007222 ORTHO05D010132 5.4e-20 102.1 176 33.5
FAN01G2879 Fragaria x ananassa HOM05D000202 ORTHO05D010132 5.4e-20 102.1 176 33.5
FAN06G0677 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.4e-20 102.1 176 34.1
FAN06G5048 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.4e-20 102.1 176 34.7
FAN06G4891 Fragaria x ananassa HOM05D007222 ORTHO05D010132 7.0e-20 101.7 176 34.7
Prupe.3G221000 Prunus persica HOM05D007222 ORTHO05D036617 1.6e-19 100.5 174 35.1
FvH4_7g27660 Fragaria vesca HOM05D007222 ORTHO05D010132 2.7e-19 99.8 176 34.1
FAN06G0811 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.5e-19 99.4 176 33.5
MD06G1178900 Malus domestica HOM05D007222 ORTHO05D010132 3.5e-19 99.4 166 34.9
MD06G1179400 Malus domestica HOM05D007222 ORTHO05D010132 5.9e-19 98.6 173 33.5
Prupe.5G196700 Prunus persica HOM05D007222 ORTHO05D010132 5.9e-19 98.6 200 35.5
FvH4_7g27710 Fragaria vesca HOM05D007222 ORTHO05D010132 1.3e-18 97.4 176 33.0
Prupe.3G220200 Prunus persica HOM05D007222 ORTHO05D036617 1.3e-18 97.4 171 35.1
FvH4_7g27631 Fragaria vesca HOM05D007222 ORTHO05D010132 1.7e-18 97.1 176 33.0
FAN06G2272 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.7e-18 97.1 176 33.0
FvH4_5g02900 Fragaria vesca HOM05D007222 ORTHO05D029649 3.8e-18 95.9 175 35.4
FAN06G2615 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.8e-18 95.9 172 33.1
FAN18G1328 Fragaria x ananassa HOM05D007222 ORTHO05D029649 3.8e-18 95.9 152 38.2
FAN03G0896 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.1e-17 94.4 176 31.2
MD14G1191500 Malus domestica HOM05D007222 ORTHO05D048640 1.1e-17 94.4 155 36.8
FAN10G0676 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.9e-17 93.6 176 31.8
RcHm_v2.0_Chr7g0205711 Rosa chinensis HOM05D007222 ORTHO05D020701 4.2e-17 92.4 137 38.0
FAN10G3128 Fragaria x ananassa HOM05D007222 ORTHO05D010132 9.5e-17 91.3 165 33.9
FAN06G2815 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.6e-16 89.4 180 32.8
Prupe.2G232100 Prunus persica HOM05D007222 ORTHO05D010132 3.6e-16 89.4 170 34.7
FvH4_7g27670 Fragaria vesca HOM05D007222 ORTHO05D010132 6.1e-16 88.6 179 33.5
FAN13G2764 Fragaria x ananassa HOM05D007222 ORTHO05D029649 6.1e-16 88.6 174 35.1
FvH4_5g16160 Fragaria vesca HOM05D007222 ORTHO05D019190 8.0e-16 88.2 150 33.3
FAN06G1439 Fragaria x ananassa HOM05D007222 ORTHO05D010132 8.0e-16 88.2 179 33.5
RcHm_v2.0_Chr1g0379111 Rosa chinensis HOM05D007222 ORTHO05D010132 1.0e-15 87.8 179 29.1
RcHm_v2.0_Chr1g0378721 Rosa chinensis HOM05D007222 ORTHO05D010132 1.8e-15 87.0 206 29.1
RcHm_v2.0_Chr1g0379031 Rosa chinensis HOM05D007222 ORTHO05D010132 1.8e-15 87.0 198 29.8
RcHm_v2.0_Chr1g0379231 Rosa chinensis HOM05D007222 ORTHO05D010132 1.8e-15 87.0 206 29.1
RcHm_v2.0_Chr1g0379381 Rosa chinensis HOM05D007222 ORTHO05D010132 1.8e-15 87.0 206 29.1
FAN18G1099 Fragaria x ananassa HOM05D007222 ORTHO05D019190 2.3e-15 86.7 150 33.3
FAN06G2032 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.0e-15 85.9 176 32.4
Prupe.5G190600 Prunus persica HOM05D007222 ORTHO05D010132 4.0e-15 85.9 150 36.7
Prupe.8G014700 Prunus persica HOM05D007222 ORTHO05D010132 5.2e-15 85.5 163 33.7
Prupe.5G216900 Prunus persica HOM05D007222 ORTHO05D010132 6.8e-15 85.1 177 34.5
RcHm_v2.0_Chr7g0179991 Rosa chinensis HOM05D007222 ORTHO05D019190 6.8e-15 85.1 166 29.5
Prupe.5G196500 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-14 84.3 172 37.2
Prupe.7G215500 Prunus persica HOM05D007222 ORTHO05D010132 1.2e-14 84.3 177 33.9
Prupe.3G199700 Prunus persica HOM05D007222 ORTHO05D010132 1.5e-14 84.0 171 32.2
FvH4_7g27720 Fragaria vesca HOM05D007222 ORTHO05D010132 2.0e-14 83.6 182 33.5
MD14G1191600 Malus domestica HOM05D007222 ORTHO05D048640 2.6e-14 83.2 145 35.9
Prupe.5G196600 Prunus persica HOM05D007222 ORTHO05D010132 2.6e-14 83.2 175 35.4
MD17G1269500 Malus domestica HOM05D007222 ORTHO05D036617 3.4e-14 82.8 170 31.8
Prupe.3G199800 Prunus persica HOM05D007222 ORTHO05D010132 3.4e-14 82.8 171 31.6
Prupe.5G190500 Prunus persica HOM05D007222 ORTHO05D010132 5.7e-14 82.0 170 33.5
Prupe.5G196800 Prunus persica HOM05D007222 ORTHO05D010132 9.8e-14 81.3 169 34.9
FAN01G0578 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.3e-13 78.6 160 31.2
RcHm_v2.0_Chr4g0388551 Rosa chinensis HOM05D007222 ORTHO05D010132 2.4e-12 76.6 185 34.1
FAN03G0246 Fragaria x ananassa HOM05D007222 ORTHO05D010132 4.1e-12 75.9 161 30.4
FvH4_5g02920 Fragaria vesca HOM05D007222 ORTHO05D046396 9.2e-12 74.7 148 31.8
RcHm_v2.0_Chr7g0180241 Rosa chinensis HOM05D000007 ORTHO05D019190 2.0e-11 73.6 180 30.0
FAN08G2897 Fragaria x ananassa HOM05D007222 ORTHO05D029649 2.7e-11 73.2 148 31.1
FAN18G3407 Fragaria x ananassa HOM05D007222 ORTHO05D046396 2.7e-11 73.2 148 31.8
FvH4_1g11560 Fragaria vesca HOM05D013290 ORTHO05D016295 7.8e-11 71.6 171 29.8
RcHm_v2.0_Chr2g0100421 Rosa chinensis HOM05D013290 ORTHO05D016295 7.8e-11 71.6 145 31.7
FAN26G2054 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.0e-10 71.2 151 29.1
FvH4_1g11671 Fragaria vesca HOM05D013290 ORTHO05D016295 1.7e-10 70.5 150 30.0
FAN19G0139 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.7e-10 70.5 150 30.0
Prupe.5G190300 Prunus persica HOM05D007222 ORTHO05D010132 1.7e-10 70.5 181 29.3
RcHm_v2.0_Chr7g0219841 Rosa chinensis HOM05D007222 ORTHO05D020701 2.3e-10 70.1 167 31.7
FAN10G3229 Fragaria x ananassa HOM05D007222 ORTHO05D010132 5.0e-10 68.9 160 29.4
FAN08G3302 Fragaria x ananassa HOM05D007222 ORTHO05D020701 1.1e-09 67.8 187 28.9
FAN03G0079 Fragaria x ananassa HOM05D001548 ORTHO05D003901 1.5e-09 67.4 181 28.2
FAN03G1782 Fragaria x ananassa HOM05D007222 ORTHO05D010132 1.5e-09 67.4 144 30.6
FAN26G0118 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.5e-09 67.4 151 29.1
FAN26G0503 Fragaria x ananassa HOM05D013290 ORTHO05D016295 1.9e-09 67.0 148 27.7
Prupe.I003600 Prunus persica HOM05D007222 ORTHO05D010132 1.9e-09 67.0 181 28.7
FAN19G1742 Fragaria x ananassa HOM05D007222 ORTHO05D020701 4.3e-09 65.9 172 29.1
FvH4_7g27640 Fragaria vesca HOM05D007222 ORTHO05D010132 1.2e-08 64.3 85 36.5
Prupe.5G190200 Prunus persica HOM05D007222 ORTHO05D010132 1.6e-08 63.9 128 32.0
FAN10G0066 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.1e-08 63.5 85 36.5
FAN03G1041 Fragaria x ananassa HOM05D007222 ORTHO05D010132 6.1e-08 62.0 85 35.3
FvH4_1g23410 Fragaria vesca HOM05D013290 ORTHO05D016295 1.2e-06 57.8 155 29.7
FvH4_5g15971 Fragaria vesca HOM05D007222 ORTHO05D035251 1.5e-06 57.4 140 33.6
FAN01G0286 Fragaria x ananassa HOM05D007222 ORTHO05D010132 2.0e-06 57.0 82 32.9
FAN08G3295 Fragaria x ananassa HOM05D007222 ORTHO05D010132 3.4e-06 56.2 87 31.0


User provided reference genes

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