Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 2.8e-143 511.9 257 100.0
FAN18G4231 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.3e-91 337.8 291 66.0
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 2.4e-78 296.2 284 59.5
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-78 296.2 318 56.3
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.3e-75 284.6 318 53.8
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-70 269.2 290 55.5
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-62 243.4 126 96.8
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-62 242.7 293 52.6
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-57 224.6 209 59.3
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 2.3e-52 209.9 321 44.5
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 4.0e-49 199.1 311 43.1
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-48 197.2 311 43.1
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-43 179.5 321 40.8
FAN06G2359 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-42 176.0 287 43.2
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 7.6e-40 168.3 327 38.8
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 7.6e-40 168.3 267 42.3
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-39 167.2 328 37.8
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 7.9e-37 158.3 309 37.5
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-36 156.4 327 37.0
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 9.7e-35 151.4 327 36.1
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 1.6e-34 150.6 188 48.4
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-34 150.2 309 36.9
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 6.9e-33 145.2 301 35.5
FvH4_5g10370 Fragaria vesca HOM05D002813 ORTHO05D003203 9.0e-33 144.8 232 44.8
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-33 144.8 237 41.4
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-32 144.4 237 41.4
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 1.5e-32 144.1 267 37.5
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 3.4e-32 142.9 301 35.5
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.6e-32 141.7 311 35.7
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-31 141.4 237 40.9
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-31 140.2 237 40.5
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 3.2e-30 136.3 323 33.7
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-30 136.0 308 38.0
FAN21G0006 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-30 135.6 273 41.0
FAN13G0265 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-29 133.3 195 46.2
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 2.7e-29 133.3 331 35.0
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.7e-28 128.3 315 33.0
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.3e-27 125.9 323 33.7
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 7.4e-27 125.2 323 34.4
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-26 124.4 323 34.1
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-26 124.4 323 34.1
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-26 122.5 256 35.9
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-26 122.5 269 36.1
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 8.2e-26 121.7 300 33.7
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 2.4e-25 120.2 324 31.8
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-23 114.8 184 42.9
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 3.8e-23 112.8 292 31.2
FAN25G3196 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-23 112.5 327 30.3
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 8.5e-23 111.7 310 31.9
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 5.5e-22 109.0 311 30.9
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.1e-21 105.5 304 32.9
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 2.3e-20 103.6 302 31.5
FAN21G2238 Fragaria x ananassa HOM05D000437 ORTHO05D003203 3.0e-20 103.2 174 42.5
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-20 102.8 302 33.1
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 1.5e-19 100.9 104 52.9
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 3.3e-19 99.8 238 30.3
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 4.4e-19 99.4 309 31.7
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 5.7e-19 99.0 305 33.1
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-19 99.0 305 33.1
FAN13G2791 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-19 98.6 306 32.7
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 9.7e-19 98.2 299 32.1
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-18 97.4 299 32.1
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 2.8e-18 96.7 293 29.4
Gohir.D05G048500 Gossypium hirsutum HOM05D002813 ORTHO05D003203 2.8e-18 96.7 236 30.9
FvH4_5g12180 Fragaria vesca HOM05D002813 ORTHO05D003203 3.7e-18 96.3 255 32.9
FAN02G4209 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.2e-18 95.1 182 37.9
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-17 94.4 215 35.8
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-17 94.4 233 33.0
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 2.4e-17 93.6 104 51.0
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 3.1e-17 93.2 310 31.6
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-17 93.2 310 31.6
Gohir.A05G046700 Gossypium hirsutum HOM05D002813 ORTHO05D003203 3.1e-17 93.2 236 30.5
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 4.1e-17 92.8 309 29.4
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-17 92.4 301 31.9
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-17 92.4 99 51.5
Gorai.009G049800 Gossypium raimondii HOM05D002813 ORTHO05D003203 5.3e-17 92.4 236 30.1
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 9.1e-17 91.7 305 30.8
RcHm_v2.0_Chr7g0185401 Rosa chinensis HOM05D002813 ORTHO05D003203 9.1e-17 91.7 299 33.4
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 1.5e-16 90.9 251 30.7
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 1.5e-16 90.9 241 30.3
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 2.6e-16 90.1 240 31.7
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 3.4e-16 89.7 109 49.5
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-15 88.2 305 30.2
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 1.3e-15 87.8 240 30.4
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-15 87.8 309 30.1
FAN18G1460 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-15 87.8 82 63.4
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-15 87.4 99 49.5
FAN18G3306 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-15 87.4 104 51.0
FAN08G0206 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.2e-15 87.0 172 33.1
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 2.9e-15 86.7 302 31.1
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-15 86.3 238 31.1
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 5.0e-15 85.9 305 29.8
FvH4_5g12210 Fragaria vesca HOM05D002813 ORTHO05D003203 5.0e-15 85.9 231 29.0
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-15 85.9 95 49.5
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-15 85.9 95 49.5
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 6.5e-15 85.5 236 28.4
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.5e-15 85.5 288 25.7
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 1.1e-14 84.7 238 29.8
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-14 84.3 107 48.6
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-14 84.3 107 48.6
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 1.4e-14 84.3 310 27.7
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-14 83.2 107 46.7
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-14 82.0 213 29.6
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-14 82.0 302 28.5
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-13 81.3 107 45.8
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-13 81.3 302 29.1
Atru.chr7.2088 Acer truncatum HOM05D002813 ORTHO05D003203 1.6e-13 80.9 314 28.3
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 1.6e-13 80.9 258 27.5
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-13 80.9 87 52.9
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-13 79.7 112 47.3
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-13 79.3 288 25.0
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-13 79.3 182 37.9
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 6.1e-13 79.0 313 27.2
FAN18G0102 Fragaria x ananassa HOM05D002813 ORTHO05D209810 1.0e-12 78.2 39 94.9
FAN03G1005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-12 77.8 183 35.5
FAN11G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-12 77.8 230 33.9
FAN09G1205 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-12 76.6 193 32.1
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 3.9e-12 76.3 236 29.7
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.9e-12 76.3 225 29.8
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 5.2e-12 75.9 110 44.5
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 6.7e-12 75.5 104 44.2
RcHm_v2.0_Chr7g0185381 Rosa chinensis HOM05D002813 ORTHO05D003203 6.7e-12 75.5 79 60.8
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 8.8e-12 75.1 236 30.1
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 8.8e-12 75.1 307 26.7
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-12 75.1 104 43.3
FAN01G2106 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-11 73.9 181 33.1
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-11 73.6 187 29.4
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 3.3e-11 73.2 241 28.2
TWI63G1080 Tripterygium wilfordii HOM05D002813 ORTHO05D003203 3.3e-11 73.2 236 30.1
Mapoly0100s0050 Marchantia polymorpha HOM05D002813 ORTHO05D003203 5.7e-11 72.4 214 27.6
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.4e-11 72.0 203 28.6
FAN04G1334 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-11 71.6 228 31.6
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 9.7e-11 71.6 211 28.0
FAN18G0957 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-10 70.9 186 29.0
FAN15G1653 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.8e-10 70.1 83 47.0
FAN04G0910 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.7e-10 69.7 78 57.7
CSS0022259 Camellia sinensis var. sinensis HOM05D002813 ORTHO05D003203 1.1e-09 68.2 132 37.1
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-09 68.2 96 49.0
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-09 67.8 286 22.7
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-09 67.4 60 65.0
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 3.1e-09 66.6 104 39.4
FAN18G2398 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-09 66.6 40 80.0
SEGI_38686 Sequoiadendron giganteum HOM05D002813 ORTHO05D003203 3.1e-09 66.6 145 30.3
FAN21G3097 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-09 66.2 110 40.9
Sc23g0005220 Simmondsia chinensis HOM05D002813 ORTHO05D003203 4.1e-09 66.2 139 33.8
FvH4_2g32600 Fragaria vesca HOM05D002813 ORTHO05D003203 5.3e-09 65.9 99 39.4
FAN02G0224 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-09 65.9 214 27.1
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 9.1e-09 65.1 81 46.9
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 9.1e-09 65.1 81 46.9
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-08 64.7 65 52.3
FAN09G4302 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-08 63.9 106 35.8
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.0e-08 63.9 211 28.4
FAN15G1647 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-08 62.8 235 31.1
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 7.7e-08 62.0 104 37.5
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-07 61.6 89 48.3
FAN14G4635 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-07 61.2 79 46.8
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 1.3e-07 61.2 312 24.4
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 2.2e-07 60.5 104 36.5
FAN25G3517 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-07 60.1 221 26.7
Peaxi162Scf00227g00722 Petunia axillaris HOM05D002813 ORTHO05D003203 2.9e-07 60.1 272 27.2
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 5.0e-07 59.3 44 68.2
FAN21G2418 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.5e-07 58.5 153 34.6
FAN20G2843 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-06 58.2 180 27.2
RcHm_v2.0_Chr3g0468781 Rosa chinensis HOM05D002813 ORTHO05D003203 1.1e-06 58.2 113 34.5
CAN.G400.3 Capsicum annuum HOM05D002813 ORTHO05D003203 1.5e-06 57.8 108 36.1
FAN16G0188 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-06 57.4 185 30.8
FAN18G1397 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-06 55.5 65 55.4
FvH4_5g33281 Fragaria vesca HOM05D002813 ORTHO05D003203 9.4e-06 55.1 77 44.2
FvH4_7g30123 Fragaria vesca HOM05D002813 ORTHO05D003203 9.4e-06 55.1 97 42.3
FAN18G2017 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.4e-06 55.1 77 44.2


User provided reference genes

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