Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g11301 Fragaria vesca HOM05D003187 ORTHO05D196353 2.0e-106 389.0 187 100.0
FAN08G1218 Fragaria x ananassa HOM05D003187 ORTHO05D003630 4.7e-23 112.1 70 80.0
FAN18G3798 Fragaria x ananassa HOM05D003187 ORTHO05D003630 4.7e-23 112.1 70 80.0
FAN18G2583 Fragaria x ananassa HOM05D003187 ORTHO05D003630 1.4e-22 110.5 70 78.6
FvH4_5g11350 Fragaria vesca HOM05D003187 ORTHO05D003630 6.8e-22 108.2 70 77.1
RcHm_v2.0_Chr7g0186531 Rosa chinensis HOM05D003187 ORTHO05D003630 8.3e-20 101.3 70 71.4
MD04G1043000 Malus domestica HOM05D003187 ORTHO05D003630 6.0e-10 68.6 64 59.4
Prupe.7G059800 Prunus persica HOM05D003187 ORTHO05D003630 5.1e-09 65.5 64 54.7
Prupe.1G197600 Prunus persica HOM05D003187 ORTHO05D003630 3.3e-08 62.8 64 53.1
Glyma.02G254000 Glycine max HOM05D003187 ORTHO05D003630 5.6e-08 62.0 57 56.1
RcHm_v2.0_Chr7g0194071 Rosa chinensis HOM05D003187 ORTHO05D003630 5.6e-08 62.0 57 56.1
Gohir.A05G346100 Gossypium hirsutum HOM05D003187 ORTHO05D003630 7.3e-08 61.6 57 56.1
Gohir.D04G066500 Gossypium hirsutum HOM05D003187 ORTHO05D003630 7.3e-08 61.6 57 56.1
Gorai.012G075300 Gossypium raimondii HOM05D003187 ORTHO05D003630 7.3e-08 61.6 57 56.1
arahy.Tifrunner.gnm1.ann1.K3QQ9E Arachis hypogaea HOM05D003187 ORTHO05D003630 9.6e-08 61.2 57 54.4
Aqoxy6G01396 Aquilegia oxysepala HOM05D003187 ORTHO05D003630 1.2e-07 60.8 57 52.6
FAN13G0040 Fragaria x ananassa HOM05D003187 ORTHO05D003630 1.2e-07 60.8 57 54.4
Glyma.14G062500 Glycine max HOM05D003187 ORTHO05D003630 1.2e-07 60.8 57 54.4
HanXRQChr14g0459901 Helianthus annuus HOM05D003187 ORTHO05D003630 1.2e-07 60.8 57 56.1
arahy.Tifrunner.gnm1.ann1.0XII0R Arachis hypogaea HOM05D003187 ORTHO05D003630 1.6e-07 60.5 57 54.4
arahy.Tifrunner.gnm1.ann1.GJ5BI6 Arachis hypogaea HOM05D003187 ORTHO05D003630 1.6e-07 60.5 57 54.4
arahy.Tifrunner.gnm1.ann1.P69V6G Arachis hypogaea HOM05D003187 ORTHO05D003630 1.6e-07 60.5 57 54.4
ECA232G0632 Erigeron canadensis HOM05D003187 ORTHO05D003630 1.6e-07 60.5 57 56.1
Nn2g12076 Nelumbo nucifera HOM05D003187 ORTHO05D003630 1.6e-07 60.5 57 54.4
Psat6g127920 Pisum sativum HOM05D003187 ORTHO05D003630 1.6e-07 60.5 57 50.9
Thecc.10G027100 Theobroma cacao HOM05D003187 ORTHO05D003630 1.6e-07 60.5 57 56.1
VMungo0647G1330 Vigna mungo HOM05D003187 ORTHO05D003630 1.6e-07 60.5 57 54.4
COL.COLO4_25670 Corchorus olitorius HOM05D003187 ORTHO05D003630 2.1e-07 60.1 57 56.1
Phvul.008G226900 Phaseolus vulgaris HOM05D003187 ORTHO05D003630 2.1e-07 60.1 68 47.1
ClCG07G003910 Citrullus lanatus HOM05D003187 ORTHO05D003630 2.8e-07 59.7 57 56.1
MELO3C025148.2 Cucumis melo HOM05D003187 ORTHO05D003630 2.8e-07 59.7 57 56.1
CsaV3_5G008870 Cucumis sativus L. HOM05D003187 ORTHO05D003630 2.8e-07 59.7 57 56.1
Migut.F00885 Erythranthe guttata HOM05D003187 ORTHO05D003630 2.8e-07 59.7 57 54.4
Glyma.10G247850 Glycine max HOM05D003187 ORTHO05D003630 2.8e-07 59.7 57 54.4
Medtr7g092860 Medicago truncatula HOM05D003187 ORTHO05D003630 2.8e-07 59.7 57 50.9
CANSAT80G1383 Cannabis sativa HOM05D003187 ORTHO05D003630 3.6e-07 59.3 57 54.4
FAN04G2380 Fragaria x ananassa HOM05D003187 ORTHO05D003630 3.6e-07 59.3 57 52.6
FAN10G0795 Fragaria x ananassa HOM05D003187 ORTHO05D003630 3.6e-07 59.3 64 50.0
QL08p062568 Quercus lobata HOM05D003187 ORTHO05D003630 3.6e-07 59.3 57 54.4
FAN08G2825 Fragaria x ananassa HOM05D003187 ORTHO05D003630 4.7e-07 58.9 57 52.6
FAN18G0443 Fragaria x ananassa HOM05D003187 ORTHO05D003630 4.7e-07 58.9 57 52.6
FAN18G2229 Fragaria x ananassa HOM05D003187 ORTHO05D003630 4.7e-07 58.9 57 52.6
TPR.G8049 Trifolium pratense HOM05D003187 ORTHO05D003630 4.7e-07 58.9 57 50.9
Ca_05654_v3 Cicer arietinum L. HOM05D003187 ORTHO05D003630 6.2e-07 58.5 57 52.6
Dinv34429 Davidia involucrata HOM05D003187 ORTHO05D003630 6.2e-07 58.5 57 52.6
Duzib114G0739 Durio zibethinus HOM05D003187 ORTHO05D003630 6.2e-07 58.5 57 54.4
FAN10G2756 Fragaria x ananassa HOM05D003187 ORTHO05D003630 6.2e-07 58.5 82 41.5
Atru.chr12.251 Acer truncatum HOM05D003187 ORTHO05D003630 8.1e-07 58.2 68 48.5
CiPaw.05G043000 Carya illinoinensis HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 52.6
CiPaw.06G148700 Carya illinoinensis HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 52.6
Dinv20950 Davidia involucrata HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 54.4
Dinv20993 Davidia involucrata HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 54.4
FAN03G0133 Fragaria x ananassa HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 52.6
LjContig00357g0016423 Lotus japonicus HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 50.9
MBI17_g24519_MAGBIO Magnolia biondii HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 50.9
Hund05583 Selenicereus undatus HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 52.6
unitig_27.g25097 Utricularia gibba HOM05D003187 ORTHO05D003630 8.1e-07 58.2 57 54.4
Ciclev10031157m.g Citrus clementina HOM05D003187 ORTHO05D003630 1.1e-06 57.8 68 48.5
Cpa.g.sc19.222 Carica papaya HOM05D003187 ORTHO05D003630 1.4e-06 57.4 57 52.6
AUR62016534 Chenopodium quinoa HOM05D003187 ORTHO05D003630 1.4e-06 57.4 57 50.9
Haze_17177 Corylus avellana HOM05D003187 ORTHO05D003630 1.4e-06 57.4 56 53.6
Lsat_1_v5_gn_7_58981 Lactuca sativa HOM05D003187 ORTHO05D003630 1.4e-06 57.4 57 52.6
Oeu027845.1 Olea europaea HOM05D003187 ORTHO05D003630 1.4e-06 57.4 57 50.9
Potri.010G193400 Populus trichocarpa HOM05D003187 ORTHO05D003630 1.4e-06 57.4 57 52.6
Sabra10G0148900 Salix brachista HOM05D003187 ORTHO05D003630 1.4e-06 57.4 57 52.6
TWI53G1626 Tripterygium wilfordii HOM05D003187 ORTHO05D003630 1.4e-06 57.4 57 52.6
GSVIVG01016375001 Vitis vinifera HOM05D003187 ORTHO05D003630 1.4e-06 57.4 57 52.6
ECA238G3690 Erigeron canadensis HOM05D003187 ORTHO05D003630 1.8e-06 57.0 57 52.6
Hma1.2p1_0710F.1_g207370 Hydrangea macrophylla HOM05D003187 ORTHO05D003630 1.8e-06 57.0 68 48.5
Lj8A73G45 Lonicera japonica HOM05D003187 ORTHO05D003630 1.8e-06 57.0 57 54.4
BcaC09g51513 Brassica carinata HOM05D003187 ORTHO05D003630 2.4e-06 56.6 57 50.9
C01p12350 Brassica napus HOM05D003187 ORTHO05D003630 2.4e-06 56.6 57 50.9
BolC1t01210H Brassica oleracea HOM05D003187 ORTHO05D003630 2.4e-06 56.6 57 50.9
Lsat_1_v5_gn_2_122660 Lactuca sativa HOM05D003187 ORTHO05D003630 2.4e-06 56.6 57 52.6
HanXRQChr07g0202751 Helianthus annuus HOM05D003187 ORTHO05D003630 3.1e-06 56.2 57 52.6
AUR62001143 Chenopodium quinoa HOM05D003187 ORTHO05D003630 4.0e-06 55.8 57 49.1
Eucgr.G03026 Eucalyptus grandis HOM05D003187 ORTHO05D003630 4.0e-06 55.8 57 49.1
FvH4_5g04980 Fragaria vesca HOM05D003187 ORTHO05D003630 4.0e-06 55.8 57 50.9
Sed0019761 Sechium edule HOM05D003187 ORTHO05D003630 4.0e-06 55.8 57 52.6
A01p10400 Brassica napus HOM05D003187 ORTHO05D003630 5.2e-06 55.5 57 49.1
BraA01t00987Z Brassica rapa HOM05D003187 ORTHO05D003630 5.2e-06 55.5 57 49.1
CSS0009728 Camellia sinensis var. sinensis HOM05D003187 ORTHO05D003630 5.2e-06 55.5 57 49.1
CSS0010540 Camellia sinensis var. sinensis HOM05D003187 ORTHO05D003630 5.2e-06 55.5 57 49.1
Rhsim09G0171800 Rhododendron simsii HOM05D003187 ORTHO05D003630 5.2e-06 55.5 57 50.9
BcaC06g30583 Brassica carinata HOM05D003187 ORTHO05D003630 6.8e-06 55.1 57 49.1
A03p51310 Brassica napus HOM05D003187 ORTHO05D003630 6.8e-06 55.1 57 49.1
SalBow1G1358 Salvia bowleyana HOM05D003187 ORTHO05D003630 6.8e-06 55.1 57 50.9
Thhalv10025077m.g Eutrema salsugineum HOM05D003187 ORTHO05D003630 8.9e-06 54.7 57 49.1
FvH4_7g08523 Fragaria vesca HOM05D003187 ORTHO05D003630 8.9e-06 54.7 57 50.9


User provided reference genes

Program Settings