Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g11180 Fragaria vesca HOM05D000248 ORTHO05D010311 1.8e-207 725.7 380 100.0
FAN18G3118 Fragaria x ananassa HOM05D000248 ORTHO05D000146 2.8e-171 605.5 459 75.6
FAN18G1596 Fragaria x ananassa HOM05D000248 ORTHO05D017958 8.0e-171 604.0 459 75.4
FvH4_5g11100 Fragaria vesca HOM05D000248 ORTHO05D000146 1.1e-170 603.6 459 75.6
FvH4_5g11210 Fragaria vesca HOM05D000248 ORTHO05D000146 1.2e-158 563.5 565 61.4
FAN08G3301 Fragaria x ananassa HOM05D000248 ORTHO05D017958 1.7e-157 559.7 457 71.8
FAN13G2367 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-157 559.7 457 72.0
FAN13G2559 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.5e-87 327.4 547 41.7
FAN13G3219 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.5e-87 327.4 547 41.7
FAN13G0180 Fragaria x ananassa HOM05D000248 ORTHO05D000146 5.5e-87 325.5 546 41.6
FAN13G1701 Fragaria x ananassa HOM05D000248 ORTHO05D000146 5.5e-87 325.5 546 41.6
FAN13G1884 Fragaria x ananassa HOM05D000248 ORTHO05D000146 5.5e-87 325.5 546 41.6
FAN13G2794 Fragaria x ananassa HOM05D000248 ORTHO05D000146 5.5e-87 325.5 546 41.6
FAN13G3019 Fragaria x ananassa HOM05D000248 ORTHO05D000146 5.5e-87 325.5 546 41.6
FAN13G2246 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.2e-87 325.1 546 41.6
FAN13G2003 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.6e-86 323.9 546 41.6
FAN13G0015 Fragaria x ananassa HOM05D000248 ORTHO05D012517 1.2e-76 291.2 388 49.5
FAN13G0066 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-75 287.3 198 82.3
FAN13G1258 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-75 287.3 198 82.3
FAN13G1491 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-75 287.3 198 82.3
FAN13G2226 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.7e-75 287.3 198 82.3
FAN13G2308 Fragaria x ananassa HOM05D000248 ORTHO05D012517 2.9e-72 276.6 176 86.9
FAN13G2049 Fragaria x ananassa HOM05D000306 ORTHO05D025348 3.5e-57 226.5 480 36.9
FvH4_5g11250 Fragaria vesca HOM05D000306 ORTHO05D025348 1.8e-53 214.2 506 34.8
FAN18G3041 Fragaria x ananassa HOM05D000083 ORTHO05D025348 3.4e-52 209.9 427 37.0
FAN18G0367 Fragaria x ananassa HOM05D000083 ORTHO05D025348 7.5e-52 208.8 474 35.4
FAN08G1641 Fragaria x ananassa HOM05D000083 ORTHO05D025348 3.7e-51 206.5 496 34.7
FvH4_7g14830 Fragaria vesca HOM05D000166 ORTHO05D001532 9.5e-39 165.2 345 35.7
RcHm_v2.0_Chr7g0186641 Rosa chinensis HOM05D000248 ORTHO05D000146 7.6e-36 155.6 450 30.9
FAN06G0627 Fragaria x ananassa HOM05D000166 ORTHO05D001532 1.3e-35 154.8 345 34.8
RcHm_v2.0_Chr1g0373981 Rosa chinensis HOM05D000614 ORTHO05D000463 2.2e-35 154.1 331 36.9
FvH4_5g11090 Fragaria vesca HOM05D001011 ORTHO05D035356 1.9e-34 151.0 353 33.4
FvH4_5g11160 Fragaria vesca HOM05D008495 ORTHO05D035356 1.9e-34 151.0 353 33.4
MD06G1115200 Malus domestica HOM05D000081 ORTHO05D000036 2.1e-33 147.5 401 32.2
FAN13G1190 Fragaria x ananassa HOM05D008495 ORTHO05D012517 5.6e-31 139.4 311 32.5
FAN08G0175 Fragaria x ananassa HOM05D030830 ORTHO05D035356 4.6e-25 119.8 404 27.5
Prupe.5G127900 Prunus persica HOM05D000529 ORTHO05D012517 7.8e-25 119.0 368 28.5
RcHm_v2.0_Chr7g0186691 Rosa chinensis HOM05D000529 ORTHO05D012517 7.3e-23 112.5 299 29.8
MD06G1115400 Malus domestica HOM05D000529 ORTHO05D025806 9.6e-23 112.1 366 27.6
Prupe.7G138400 Prunus persica HOM05D000046 ORTHO05D025806 2.1e-22 110.9 204 41.2
Prupe.5G127700 Prunus persica HOM05D000529 ORTHO05D010311 3.6e-22 110.2 214 36.4
FvH4_7g26420 Fragaria vesca HOM05D008495 ORTHO05D046041 8.1e-22 109.0 98 60.2
RcHm_v2.0_Chr2g0102741 Rosa chinensis HOM05D001084 ORTHO05D001275 1.4e-21 108.2 412 27.9
FAN18G2317 Fragaria x ananassa HOM05D008495 ORTHO05D010311 2.4e-21 107.5 201 38.8
RcHm_v2.0_Chr7g0186631 Rosa chinensis HOM05D008495 ORTHO05D017958 7.6e-20 102.4 246 29.7
FAN06G0595 Fragaria x ananassa HOM05D000166 ORTHO05D001532 1.3e-19 101.7 315 31.4
RcHm_v2.0_Chr1g0373971 Rosa chinensis HOM05D000614 ORTHO05D000463 1.3e-19 101.7 175 45.7
FAN06G3151 Fragaria x ananassa HOM05D008495 ORTHO05D046041 8.4e-19 99.0 88 60.2
RcHm_v2.0_Chr2g0104561 Rosa chinensis HOM05D000046 ORTHO05D025806 1.1e-18 98.6 182 40.1
Prupe.5G127600 Prunus persica HOM05D000529 ORTHO05D010311 1.3e-16 91.7 115 44.3
MD06G1116000 Malus domestica HOM05D000054 ORTHO05D000286 3.0e-16 90.5 190 34.7
FAN04G2500 Fragaria x ananassa HOM05D008495 ORTHO05D010311 6.7e-16 89.4 143 38.5
FvH4_1g13660 Fragaria vesca HOM05D001084 ORTHO05D001275 8.7e-16 89.0 174 36.2
FAN23G1659 Fragaria x ananassa HOM05D000891 ORTHO05D000761 8.7e-16 89.0 174 35.1
FvH4_5g11120 Fragaria vesca HOM05D000248 ORTHO05D017958 1.5e-15 88.2 245 26.9
FvH4_5g11230 Fragaria vesca HOM05D000248 ORTHO05D017958 1.5e-15 88.2 245 26.9
FAN13G2602 Fragaria x ananassa HOM05D000248 ORTHO05D017958 1.5e-15 88.2 246 27.2
FvH4_5g11200 Fragaria vesca HOM05D000248 ORTHO05D017958 4.3e-15 86.7 243 27.2
FvH4_5g11220 Fragaria vesca HOM05D000248 ORTHO05D017958 9.6e-15 85.5 244 27.0
FAN18G4033 Fragaria x ananassa HOM05D000248 ORTHO05D017958 9.6e-15 85.5 243 26.7
FAN26G0747 Fragaria x ananassa HOM05D001563 ORTHO05D000761 1.3e-14 85.1 174 35.6
FvH4_1g13670 Fragaria vesca HOM05D008495 ORTHO05D012517 8.1e-14 82.4 174 35.1
FAN28G0579 Fragaria x ananassa HOM05D008495 ORTHO05D010311 2.4e-13 80.9 101 45.5
RcHm_v2.0_Chr7g0186621 Rosa chinensis HOM05D000529 ORTHO05D000628 2.4e-13 80.9 200 33.0
RcHm_v2.0_Chr2g0104611 Rosa chinensis HOM05D000046 ORTHO05D000472 6.9e-13 79.3 111 41.4
FAN13G0044 Fragaria x ananassa HOM05D000529 ORTHO05D012517 1.5e-12 78.2 377 25.5
FvH4_6g50100 Fragaria vesca HOM05D000529 ORTHO05D000472 2.6e-12 77.4 158 39.2
FAN23G2757 Fragaria x ananassa HOM05D000529 ORTHO05D010311 2.6e-12 77.4 101 43.6
MD15G1278700 Malus domestica HOM05D000046 ORTHO05D025806 2.6e-12 77.4 214 33.6
Prupe.7G139600 Prunus persica HOM05D000529 ORTHO05D000472 2.6e-12 77.4 111 45.0
RcHm_v2.0_Chr2g0104831 Rosa chinensis HOM05D000083 ORTHO05D002708 3.4e-12 77.0 128 39.1
FAN04G0459 Fragaria x ananassa HOM05D000529 ORTHO05D010311 4.5e-12 76.6 172 30.2
MD02G1022000 Malus domestica HOM05D008495 ORTHO05D025806 4.5e-12 76.6 146 39.7
FAN14G3438 Fragaria x ananassa HOM05D000529 ORTHO05D000472 7.6e-12 75.9 154 38.3
RcHm_v2.0_Chr2g0104741 Rosa chinensis HOM05D000529 ORTHO05D000472 7.6e-12 75.9 171 32.7
FAN18G1889 Fragaria x ananassa HOM05D000529 ORTHO05D010311 1.3e-11 75.1 142 31.7
MD02G1021700 Malus domestica HOM05D000041 ORTHO05D001532 1.3e-11 75.1 252 34.1
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 1.3e-11 75.1 143 33.6
FvH4_1g15120 Fragaria vesca HOM05D000529 ORTHO05D000472 1.7e-11 74.7 100 40.0
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 4.9e-11 73.2 145 36.6
FAN05G0295 Fragaria x ananassa HOM05D000529 ORTHO05D000472 8.4e-11 72.4 158 38.0
FAN26G0958 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.1e-10 72.0 110 38.2
FAN13G1716 Fragaria x ananassa HOM05D000248 ORTHO05D012517 1.4e-10 71.6 61 47.5
FAN13G1987 Fragaria x ananassa HOM05D000248 ORTHO05D012517 1.4e-10 71.6 61 47.5
FAN19G0833 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.9e-10 71.2 154 36.4
FvH4_1g15330 Fragaria vesca HOM05D000529 ORTHO05D000472 2.5e-10 70.9 110 38.2
FAN19G2660 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.5e-10 70.9 110 38.2
FAN26G3207 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.5e-10 70.9 100 37.0
RcHm_v2.0_Chr2g0143661 Rosa chinensis HOM05D003771 ORTHO05D010311 2.5e-10 70.9 109 40.4
FvH4_5g32820 Fragaria vesca HOM05D000529 ORTHO05D010311 3.2e-10 70.5 97 38.1
FAN08G3275 Fragaria x ananassa HOM05D000248 ORTHO05D012517 5.5e-10 69.7 63 44.4
Prupe.7G139500 Prunus persica HOM05D000529 ORTHO05D000472 9.3e-10 68.9 197 32.0
RcHm_v2.0_Chr7g0230651 Rosa chinensis HOM05D000529 ORTHO05D010311 9.3e-10 68.9 103 41.7
FvH4_1g15170 Fragaria vesca HOM05D000529 ORTHO05D000472 1.2e-09 68.6 206 31.6
FAN08G3343 Fragaria x ananassa HOM05D000529 ORTHO05D010311 1.2e-09 68.6 97 38.1
FAN18G2904 Fragaria x ananassa HOM05D008495 ORTHO05D012517 1.6e-09 68.2 47 63.8
MD02G1165500 Malus domestica HOM05D000529 ORTHO05D000472 2.1e-09 67.8 106 38.7
RcHm_v2.0_Chr2g0104191 Rosa chinensis HOM05D000529 ORTHO05D000472 2.7e-09 67.4 99 41.4
FAN23G2692 Fragaria x ananassa HOM05D000529 ORTHO05D000472 3.5e-09 67.0 108 38.9
FAN28G2659 Fragaria x ananassa HOM05D000529 ORTHO05D000472 3.5e-09 67.0 152 35.5
FAN23G2222 Fragaria x ananassa HOM05D000529 ORTHO05D000472 7.9e-09 65.9 148 36.5
FAN28G0376 Fragaria x ananassa HOM05D000529 ORTHO05D000472 7.9e-09 65.9 158 33.5
FAN28G1580 Fragaria x ananassa HOM05D000529 ORTHO05D000472 7.9e-09 65.9 158 33.5
Prupe.7G139800 Prunus persica HOM05D000529 ORTHO05D000472 7.9e-09 65.9 157 33.8
FAN28G0855 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.0e-08 65.5 99 38.4
RcHm_v2.0_Chr2g0104731 Rosa chinensis HOM05D000577 ORTHO05D003509 1.0e-08 65.5 181 32.0
RcHm_v2.0_Chr7g0212121 Rosa chinensis HOM05D000026 ORTHO05D001436 1.3e-08 65.1 104 37.5
RcHm_v2.0_Chr7g0230551 Rosa chinensis HOM05D000529 ORTHO05D010311 1.3e-08 65.1 98 36.7
FvH4_5g32830 Fragaria vesca HOM05D000529 ORTHO05D010311 1.8e-08 64.7 102 39.2
FAN18G1950 Fragaria x ananassa HOM05D000529 ORTHO05D010311 1.8e-08 64.7 102 39.2
RcHm_v2.0_Chr2g0104381 Rosa chinensis HOM05D000529 ORTHO05D000472 1.8e-08 64.7 124 32.3
FAN18G3298 Fragaria x ananassa HOM05D000248 ORTHO05D012517 2.3e-08 64.3 154 34.4
FAN19G2597 Fragaria x ananassa HOM05D000529 ORTHO05D000472 2.3e-08 64.3 108 37.0
RcHm_v2.0_Chr3g0480561 Rosa chinensis HOM05D000529 ORTHO05D000472 2.3e-08 64.3 151 33.1
RcHm_v2.0_Chr7g0230701 Rosa chinensis HOM05D000529 ORTHO05D010311 2.3e-08 64.3 99 34.3
FAN05G0579 Fragaria x ananassa HOM05D000529 ORTHO05D000472 3.0e-08 63.9 176 33.5
FvH4_6g50140 Fragaria vesca HOM05D000529 ORTHO05D000472 5.1e-08 63.2 180 33.3
FAN14G0251 Fragaria x ananassa HOM05D000529 ORTHO05D000472 5.1e-08 63.2 180 33.3
MD02G1165300 Malus domestica HOM05D000529 ORTHO05D000472 5.1e-08 63.2 125 35.2
FAN02G0723 Fragaria x ananassa HOM05D000529 ORTHO05D010311 8.7e-08 62.4 90 44.4
Prupe.7G139700 Prunus persica HOM05D000529 ORTHO05D000472 1.1e-07 62.0 97 39.2
FvH4_1g15220 Fragaria vesca HOM05D000529 ORTHO05D000472 1.5e-07 61.6 108 36.1
FvH4_1g15230 Fragaria vesca HOM05D000529 ORTHO05D000472 1.5e-07 61.6 158 32.9
FAN08G1780 Fragaria x ananassa HOM05D000529 ORTHO05D010311 1.5e-07 61.6 102 38.2
FAN18G3095 Fragaria x ananassa HOM05D008495 ORTHO05D012517 1.5e-07 61.6 48 52.1
MD02G1164300 Malus domestica HOM05D000529 ORTHO05D000472 1.5e-07 61.6 104 33.7
Prupe.7G139200 Prunus persica HOM05D000529 ORTHO05D000472 1.5e-07 61.6 186 31.2
RcHm_v2.0_Chr2g0104391 Rosa chinensis HOM05D000529 ORTHO05D000472 1.5e-07 61.6 147 33.3
FAN09G0851 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.9e-07 61.2 176 33.0
MD02G1164800 Malus domestica HOM05D000529 ORTHO05D000472 1.9e-07 61.2 125 35.2
FAN18G0250 Fragaria x ananassa HOM05D008495 ORTHO05D012517 2.5e-07 60.8 44 61.4
MD02G1165900 Malus domestica HOM05D000529 ORTHO05D010311 2.5e-07 60.8 142 33.8
RcHm_v2.0_Chr2g0104431 Rosa chinensis HOM05D000529 ORTHO05D000472 2.5e-07 60.8 159 31.4
RcHm_v2.0_Chr2g0104171 Rosa chinensis HOM05D000529 ORTHO05D000472 5.7e-07 59.7 97 30.9
FAN15G2844 Fragaria x ananassa HOM05D014919 ORTHO05D029631 9.6e-07 58.9 108 35.2
RcHm_v2.0_Chr1g0326431 Rosa chinensis HOM05D000529 ORTHO05D000472 9.6e-07 58.9 151 31.8
FvH4_1g15160 Fragaria vesca HOM05D000529 ORTHO05D000472 1.3e-06 58.5 107 32.7
FvH4_5g32810 Fragaria vesca HOM05D000529 ORTHO05D010311 1.3e-06 58.5 102 36.3
FAN19G2554 Fragaria x ananassa HOM05D000529 ORTHO05D000472 1.3e-06 58.5 107 32.7
MD00G1053700 Malus domestica HOM05D000529 ORTHO05D000472 1.3e-06 58.5 107 35.5
FvH4_1g17470 Fragaria vesca HOM05D000529 ORTHO05D000472 1.6e-06 58.2 146 33.6
FAN26G1753 Fragaria x ananassa HOM05D000046 ORTHO05D020739 1.6e-06 58.2 88 45.5
RcHm_v2.0_Chr2g0102961 Rosa chinensis HOM05D000046 ORTHO05D020739 1.6e-06 58.2 82 43.9
RcHm_v2.0_Chr3g0480541 Rosa chinensis HOM05D000529 ORTHO05D000472 1.6e-06 58.2 155 34.8
RcHm_v2.0_Chr6g0296131 Rosa chinensis HOM05D021820 ORTHO05D029631 1.6e-06 58.2 108 36.1
FvH4_2g27320 Fragaria vesca HOM05D014919 ORTHO05D029631 2.8e-06 57.4 108 36.1
FAN23G0627 Fragaria x ananassa HOM05D000046 ORTHO05D020739 4.8e-06 56.6 82 46.3
MD02G1165400 Malus domestica HOM05D000529 ORTHO05D000472 4.8e-06 56.6 106 34.9
Prupe.7G138800 Prunus persica HOM05D000529 ORTHO05D000472 4.8e-06 56.6 134 36.6
MD02G1165600 Malus domestica HOM05D000529 ORTHO05D000472 6.2e-06 56.2 164 32.9
RcHm_v2.0_Chr7g0230541 Rosa chinensis HOM05D000529 ORTHO05D010311 6.2e-06 56.2 103 35.9
FAN09G3823 Fragaria x ananassa HOM05D000529 ORTHO05D000472 8.2e-06 55.8 106 34.9
MD15G1277700 Malus domestica HOM05D000529 ORTHO05D000472 8.2e-06 55.8 145 31.7


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