Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 1.0e-120 436.8 225 100.0
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.0e-120 436.8 225 100.0
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 8.5e-120 433.7 225 99.6
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 6.1e-118 427.6 225 99.1
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.2e-112 409.1 221 95.5
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.8e-109 399.4 222 95.5
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 8.3e-91 337.4 223 82.1
FAN15G2538 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.5e-81 305.4 161 100.0
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 2.6e-44 183.0 217 53.0
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 6.5e-43 178.3 219 54.8
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 6.0e-41 171.8 221 52.9
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 1.2e-28 131.0 217 43.3
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.2e-27 126.7 216 42.6
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 7.2e-26 121.7 217 42.9
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 6.1e-25 118.6 218 38.5
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 1.8e-24 117.1 219 41.1
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 6.7e-24 115.2 218 39.4
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.3e-22 110.9 214 40.2
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.7e-22 110.5 216 40.3
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 6.3e-22 108.6 215 43.7
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 1.4e-21 107.5 218 36.2
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 1.8e-21 107.1 220 40.0
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 2.6e-20 103.2 222 37.4
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 4.5e-20 102.4 233 36.1
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.0e-19 101.3 225 36.4
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 1.7e-19 100.5 220 36.8
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 2.9e-19 99.8 219 39.3
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 5.5e-18 95.5 224 35.3
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 7.2e-18 95.1 240 34.6
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 9.4e-18 94.7 210 36.2
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.2e-17 94.4 215 36.7
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 3.6e-17 92.8 217 37.3
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 6.1e-17 92.0 212 39.6
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 1.0e-16 91.3 221 33.5
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 1.4e-16 90.9 223 34.5
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 3.9e-16 89.4 122 46.7
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 8.8e-16 88.2 216 34.7
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.4e-15 85.9 249 32.1
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 4.4e-15 85.9 223 33.2
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 5.7e-15 85.5 215 33.0
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 1.3e-14 84.3 222 32.4
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 1.7e-14 84.0 248 32.7
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 2.2e-14 83.6 131 40.5
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.2e-14 83.6 223 32.7
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 2.2e-14 83.6 219 32.9
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 2.2e-14 83.6 218 33.9
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.8e-14 83.2 242 31.8
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 8.2e-14 81.6 228 33.3
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.1e-13 81.3 230 34.3
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 1.8e-13 80.5 212 34.0
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 2.4e-13 80.1 179 38.0
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 2.4e-13 80.1 242 33.1
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.1e-13 79.3 222 34.2
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 9.1e-13 78.2 223 37.7
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 9.1e-13 78.2 223 35.0
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 1.2e-12 77.8 175 37.1
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 2.0e-12 77.0 236 30.5
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 2.6e-12 76.6 222 32.0
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 3.5e-12 76.3 228 30.7
Dinv23173 Davidia involucrata HOM05D007269 ORTHO05D008531 4.5e-12 75.9 160 39.4
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 7.7e-12 75.1 89 47.2
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 1.0e-11 74.7 226 32.7
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 1.3e-11 74.3 210 33.8
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 5.0e-11 72.4 216 34.3
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 5.0e-11 72.4 223 35.9
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 1.1e-10 71.2 224 29.5
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.2e-09 67.8 219 33.3
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 1.2e-09 67.8 241 29.5
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.6e-09 67.4 239 30.5
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 2.7e-09 66.6 243 30.0
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 4.7e-09 65.9 146 35.6
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 1.8e-08 63.9 235 30.6
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.8e-08 63.9 157 40.1
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 4.0e-08 62.8 176 34.1
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 5.2e-08 62.4 233 31.3
VMungo0251G2992 Vigna mungo HOM05D031312 ORTHO05D008531 8.8e-08 61.6 175 34.9
Zm00001eb364140 Zea mays HOM05D007269 ORTHO05D008531 1.5e-07 60.8 220 29.1
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 2.6e-07 60.1 267 27.3
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 4.4e-07 59.3 133 32.3
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 5.7e-07 58.9 222 28.8
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 7.5e-07 58.5 248 29.8
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 1.7e-06 57.4 232 29.7
Medtr8g096640 Medicago truncatula HOM05D007269 ORTHO05D008531 2.2e-06 57.0 216 29.6
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 2.2e-06 57.0 133 35.3
Zm00001eb142990 Zea mays HOM05D007269 ORTHO05D008531 2.2e-06 57.0 222 28.8


User provided reference genes

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