Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 1.0e-128 463.4 226 100.0
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.8e-128 461.5 226 99.6
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.9e-127 459.1 226 98.7
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.7e-126 454.5 226 97.8
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 4.7e-126 454.5 226 97.8
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 1.8e-117 426.0 226 92.0
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.2e-114 415.2 247 84.6
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 2.0e-113 412.5 226 87.2
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 1.7e-112 409.5 226 85.8
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 6.8e-109 397.5 224 86.2
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 3.7e-107 391.7 226 84.1
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 3.5e-105 385.2 228 83.8
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 6.0e-105 384.4 228 84.2
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 6.0e-105 384.4 224 83.5
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.7e-104 382.9 228 81.1
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 1.5e-103 379.8 227 81.1
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 4.3e-103 378.3 225 79.6
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 4.3e-103 378.3 226 80.5
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 4.3e-103 378.3 226 81.9
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 4.3e-103 378.3 224 82.1
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 2.1e-102 375.9 226 80.1
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 6.2e-102 374.4 226 79.2
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 8.1e-102 374.0 230 80.9
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.1e-101 373.6 224 80.4
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 1.1e-101 373.6 224 79.9
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.4e-101 373.2 226 81.0
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 2.3e-101 372.5 225 78.7
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 2.3e-101 372.5 224 79.9
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 6.8e-101 370.9 224 79.5
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.0e-100 369.4 226 80.1
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 5.8e-100 367.9 225 77.3
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.3e-99 366.7 224 77.2
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.7e-99 366.3 225 77.3
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.2e-99 365.9 225 76.9
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 2.2e-99 365.9 224 81.2
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.9e-99 365.5 224 79.5
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 8.3e-99 364.0 226 78.3
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 1.1e-98 363.6 225 78.2
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.4e-98 363.2 228 75.9
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.9e-98 362.8 227 78.4
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 3.2e-98 362.1 225 75.1
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 5.4e-98 361.3 224 78.6
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 7.1e-98 360.9 224 77.2
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 9.2e-98 360.5 232 75.9
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.2e-97 360.1 251 73.3
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 1.6e-97 359.8 223 74.9
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 2.7e-97 359.0 226 78.8
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 3.5e-97 358.6 226 77.9
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 6.0e-97 357.8 224 76.3
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 6.0e-97 357.8 224 76.3
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 7.8e-97 357.5 227 78.4
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 1.0e-96 357.1 224 74.1
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.0e-96 357.1 224 76.8
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 1.3e-96 356.7 224 75.9
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 1.3e-96 356.7 226 78.3
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 1.7e-96 356.3 224 76.3
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.7e-96 356.3 226 78.3
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 2.3e-96 355.9 223 74.4
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 3.9e-96 355.1 223 74.4
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 3.9e-96 355.1 223 74.4
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 5.1e-96 354.8 223 74.0
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 5.1e-96 354.8 223 74.0
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 6.6e-96 354.4 226 77.4
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.9e-95 352.8 236 73.7
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 3.3e-95 352.1 223 74.0
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 5.6e-95 351.3 225 76.4
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 1.2e-94 350.1 223 76.7
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 3.6e-94 348.6 210 80.5
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 6.2e-94 347.8 233 73.8
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.8e-93 346.3 235 71.9
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 1.2e-92 343.6 210 80.5
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 5.8e-92 341.3 260 67.3
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 7.6e-92 340.9 228 73.7
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.3e-91 340.1 226 75.7
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 2.9e-91 339.0 225 73.3
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 4.9e-91 338.2 207 78.3
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.4e-90 336.7 228 73.2
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.9e-90 336.3 208 79.3
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 2.4e-90 335.9 224 71.4
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.6e-89 333.2 232 69.4
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.0e-88 330.5 210 76.2
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.7e-88 329.7 244 67.6
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 3.9e-88 328.6 226 71.2
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 8.6e-88 327.4 231 69.3
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.1e-85 320.5 209 74.6
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 2.4e-85 319.3 208 73.6
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 3.1e-85 318.9 212 75.0
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.0e-84 316.2 226 71.7
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.6e-84 315.8 207 73.9
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 1.3e-83 313.5 233 69.1
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 5.4e-82 308.1 235 68.9
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 7.1e-82 307.8 219 70.8
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 8.7e-80 300.8 208 73.6
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 2.8e-78 295.8 242 62.4
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 8.4e-75 284.3 175 80.6
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 5.4e-74 281.6 226 64.2
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 3.5e-73 278.9 152 85.5
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.0e-72 277.3 207 68.6
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 3.9e-72 275.4 235 61.7
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.1e-69 267.3 175 69.1
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 1.5e-68 263.5 226 61.9
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.0e-68 263.1 174 67.8
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 3.2e-66 255.8 330 45.8
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 4.2e-66 255.4 228 58.8
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.9e-64 248.8 147 77.6
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.9e-63 246.5 155 77.4
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.1e-61 240.7 226 56.6
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 9.3e-58 227.6 123 83.7
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 9.3e-58 227.6 161 62.1
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 3.5e-57 225.7 145 78.6
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 5.0e-51 205.3 131 67.2
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 2.9e-43 179.5 173 52.0
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 8.5e-43 177.9 134 62.7
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.3e-38 164.1 159 49.7
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.6e-28 130.6 89 73.0
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.6e-28 129.8 63 92.1
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 8.5e-27 124.8 86 65.1
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 4.7e-25 119.0 63 82.5
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.8e-24 117.1 68 83.8
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 5.7e-23 112.1 144 45.1
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.0e-19 101.3 121 47.9
Lalb_Chr14g0365481 Lupinus albus HOM05D006563 ORTHO05D239264 8.3e-06 55.1 39 64.1


User provided reference genes

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