Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g08082 Fragaria vesca HOM05D000107 ORTHO05D002484 4.4e-72 274.6 148 100.0
FvH4_4g10471 Fragaria vesca HOM05D000107 ORTHO05D000062 2.6e-69 265.4 148 97.3
FvH4_4g13891 Fragaria vesca HOM05D000107 ORTHO05D000062 2.6e-69 265.4 148 97.3
FvH4_5g30952 Fragaria vesca HOM05D000107 ORTHO05D000062 2.6e-69 265.4 148 97.3
FvH4_3g33093 Fragaria vesca HOM05D000107 ORTHO05D002484 7.7e-69 263.8 148 96.6
FvH4_4g12773 Fragaria vesca HOM05D000107 ORTHO05D002484 7.7e-69 263.8 148 96.6
FvH4_4g14443 Fragaria vesca HOM05D000107 ORTHO05D002484 7.7e-69 263.8 148 95.9
FvH4_7g17991 Fragaria vesca HOM05D000107 ORTHO05D000062 1.0e-68 263.5 148 92.6
FvH4_6g20142 Fragaria vesca HOM05D000107 ORTHO05D002484 1.3e-68 263.1 148 96.6
FvH4_7g13281 Fragaria vesca HOM05D000107 ORTHO05D002484 1.3e-68 263.1 148 96.6
FvH4_3g30614 Fragaria vesca HOM05D000107 ORTHO05D002484 2.2e-68 262.3 148 96.6
FvH4_3g16302 Fragaria vesca HOM05D000107 ORTHO05D002484 2.9e-68 261.9 148 91.9
FvH4_4g19121 Fragaria vesca HOM05D000107 ORTHO05D000062 1.4e-67 259.6 148 91.9
FvH4_2g02785 Fragaria vesca HOM05D000107 ORTHO05D000062 1.9e-67 259.2 148 94.6
FvH4_6g21813 Fragaria vesca HOM05D000107 ORTHO05D000062 2.5e-67 258.8 148 87.8
FvH4_1g22122 Fragaria vesca HOM05D000107 ORTHO05D002484 9.4e-67 256.9 146 88.4
FvH4_3g32261 Fragaria vesca HOM05D000107 ORTHO05D002484 9.4e-67 256.9 148 87.2
FvH4_4g04242 Fragaria vesca HOM05D000107 ORTHO05D002484 1.2e-66 256.5 148 93.2
FvH4_4g14562 Fragaria vesca HOM05D000107 ORTHO05D002484 1.2e-66 256.5 148 93.9
FvH4_3g33044 Fragaria vesca HOM05D000107 ORTHO05D002484 2.1e-66 255.8 148 87.2
FvH4_1g02311 Fragaria vesca HOM05D000107 ORTHO05D000062 8.0e-66 253.8 141 95.0
FvH4_1g28422 Fragaria vesca HOM05D000107 ORTHO05D002484 1.0e-65 253.4 147 87.8
FvH4_6g39685 Fragaria vesca HOM05D000107 ORTHO05D002484 1.0e-65 253.4 131 95.4
FvH4_6g33481 Fragaria vesca HOM05D000107 ORTHO05D002484 1.8e-65 252.7 148 86.5
FvH4_7g07901 Fragaria vesca HOM05D000107 ORTHO05D000062 1.8e-65 252.7 148 86.5
FvH4_3g14320 Fragaria vesca HOM05D000107 ORTHO05D002484 8.8e-65 250.4 148 85.1
FvH4_6g30772 Fragaria vesca HOM05D000107 ORTHO05D002484 7.4e-64 247.3 148 86.5
FvH4_4g13832 Fragaria vesca HOM05D000107 ORTHO05D002484 2.2e-63 245.7 148 84.5
FvH4_5g35211 Fragaria vesca HOM05D000107 ORTHO05D002484 8.2e-63 243.8 148 84.5
FvH4_6g28112 Fragaria vesca HOM05D000107 ORTHO05D002484 4.1e-62 241.5 148 91.2
FvH4_5g06092 Fragaria vesca HOM05D000107 ORTHO05D000062 1.2e-61 240.0 148 90.5
FvH4_5g24272 Fragaria vesca HOM05D000107 ORTHO05D002484 3.5e-61 238.4 148 82.4
FvH4_3g25312 Fragaria vesca HOM05D000107 ORTHO05D000062 8.5e-60 233.8 147 89.8
FvH4_7g06092 Fragaria vesca HOM05D000107 ORTHO05D000062 6.1e-58 227.6 131 88.5
FvH4_4g14283 Fragaria vesca HOM05D000107 ORTHO05D000062 4.2e-51 204.9 119 87.4
FvH4_2g19023 Fragaria vesca HOM05D000107 ORTHO05D002484 2.1e-50 202.6 148 73.6
FvH4_7g00291 Fragaria vesca HOM05D000107 ORTHO05D002484 3.0e-49 198.7 146 72.6
FvH4_3g30391 Fragaria vesca HOM05D008640 ORTHO05D000062 5.2e-49 198.0 103 95.1
FvH4_6g40311 Fragaria vesca HOM05D000107 ORTHO05D002484 5.4e-46 188.0 108 93.5
FvH4_6g06671 Fragaria vesca HOM05D000107 ORTHO05D002484 1.7e-44 183.0 117 80.3
FvH4_2g02272 Fragaria vesca HOM05D000107 ORTHO05D002484 2.9e-44 182.2 95 94.7
FvH4_2g13851 Fragaria vesca HOM05D000107 ORTHO05D002484 9.2e-38 160.6 148 62.8
FvH4_4g03322 Fragaria vesca HOM05D000107 ORTHO05D000062 5.0e-36 154.8 148 61.5
FvH4_6g43082 Fragaria vesca HOM05D000107 ORTHO05D000062 5.2e-33 144.8 71 98.6
FAN24G3358 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.2e-29 133.7 71 88.7
FAN21G3959 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.5e-29 132.1 82 79.3
FAN26G1783 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.0e-28 130.6 79 79.7
FAN28G1809 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.3e-28 130.2 78 80.8
FAN03G2920 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.3e-28 129.4 78 80.8
FAN17G2616 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.0e-28 128.3 78 79.5
FAN02G1470 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.5e-27 126.7 78 78.2
FAN13G0590 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.5e-27 126.7 79 78.5
FvH4_5g03061 Fragaria vesca HOM05D000107 ORTHO05D000062 1.9e-27 126.3 107 62.6
FAN20G0108 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.5e-27 124.0 75 80.0
FAN06G4542 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.1e-26 122.9 77 76.6
FvH4_2g00032 Fragaria vesca HOM05D000107 ORTHO05D002484 1.4e-25 120.2 61 93.4
FAN13G0454 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.3e-25 119.4 62 88.7
FAN21G2871 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.3e-25 119.4 62 88.7
FvH4_6g34821 Fragaria vesca HOM05D000107 ORTHO05D000062 1.6e-18 96.7 128 45.3
FvH4_5g35083 Fragaria vesca HOM05D008794 ORTHO05D013083 1.2e-16 90.5 134 41.8
FAN18G3593 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.8e-16 88.2 48 81.2
FvH4_2g14771 Fragaria vesca HOM05D000107 ORTHO05D002484 4.1e-14 82.0 54 79.6
Atru.chr6.422 Acer truncatum HOM05D000107 ORTHO05D000062 7.8e-13 77.8 126 38.9
FvH4_7g15281 Fragaria vesca HOM05D007789 ORTHO05D008963 1.7e-12 76.6 94 41.5
FAN02G3583 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.0e-12 75.9 44 84.1
FAN20G3144 Fragaria x ananassa HOM05D007789 ORTHO05D008963 6.6e-12 74.7 89 41.6
FAN19G1277 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.3e-11 72.0 35 97.1
CANSAT21G2134 Cannabis sativa HOM05D000107 ORTHO05D000062 6.2e-10 68.2 68 47.1
FvH4_6g17652 Fragaria vesca HOM05D000107 ORTHO05D008963 8.1e-10 67.8 50 60.0
CANSAT35G0031 Cannabis sativa HOM05D000107 ORTHO05D000062 1.1e-09 67.4 132 34.1
CANSAT56G2137 Cannabis sativa HOM05D000107 ORTHO05D000062 3.1e-09 65.9 66 45.5
CANSAT80G2014 Cannabis sativa HOM05D000107 ORTHO05D000062 4.0e-09 65.5 131 30.5
CANSAT11G1880 Cannabis sativa HOM05D000107 ORTHO05D000062 8.9e-09 64.3 116 35.3
PSO339G6582 Papaver somniferum HOM05D000107 ORTHO05D000062 1.2e-08 63.9 130 33.1
PSO384G2882 Papaver somniferum HOM05D000107 ORTHO05D000062 1.2e-08 63.9 130 33.1
PSO675G6961 Papaver somniferum HOM05D000107 ORTHO05D000062 1.2e-08 63.9 130 33.1
FAN05G3146 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.5e-08 63.5 80 43.8
PSO063G0443 Papaver somniferum HOM05D000107 ORTHO05D000062 1.5e-08 63.5 130 33.1
CANSAT01G1656 Cannabis sativa HOM05D000107 ORTHO05D000062 2.0e-08 63.2 92 40.2
RcHm_v2.0_Chr2g0106121 Rosa chinensis HOM05D000107 ORTHO05D000062 2.6e-08 62.8 122 33.6
FvH4_3g31280 Fragaria vesca HOM05D007789 ORTHO05D008963 3.4e-08 62.4 154 32.5
FvH4_6g23073 Fragaria vesca HOM05D000107 ORTHO05D000062 3.4e-08 62.4 129 32.6
PSO541G2440 Papaver somniferum HOM05D000107 ORTHO05D000062 3.4e-08 62.4 125 36.8
PSO384G4887 Papaver somniferum HOM05D000107 ORTHO05D000062 5.8e-08 61.6 103 34.0
FvH4_4g15893 Fragaria vesca HOM05D000107 ORTHO05D000062 7.6e-08 61.2 127 33.1
FAN13G0303 Fragaria x ananassa HOM05D000107 ORTHO05D002484 7.6e-08 61.2 31 93.5
QL12p013571 Quercus lobata HOM05D000107 ORTHO05D000062 9.9e-08 60.8 147 32.0
Rhsim03G0061000 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.9e-08 60.8 128 31.2
ECA043G0002 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.3e-07 60.5 129 31.8
ECA232G2177 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.3e-07 60.5 129 31.8
ECA236G3275 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.3e-07 60.5 129 31.8
Atru.chr11.112 Acer truncatum HOM05D000107 ORTHO05D000062 1.7e-07 60.1 97 30.9
CSS0003957 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-07 60.1 84 33.3
CSS0007220 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-07 60.1 84 33.3
CSS0012009 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-07 60.1 84 33.3
CSS0048865 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-07 60.1 84 33.3
FAN22G1322 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.7e-07 60.1 124 29.0
CSS0009121 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 59.7 84 33.3
CSS0013519 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 59.7 84 33.3
CSS0049745 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.2e-07 59.7 84 32.1
CANSAT21G1356 Cannabis sativa HOM05D000107 ORTHO05D000062 2.2e-07 59.7 112 33.0
FAN07G2270 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.9e-07 59.3 128 32.0
Rhsim03G0202400 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-07 59.3 65 43.1
CSS0022398 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.8e-07 58.9 84 33.3
CSS0050072 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.8e-07 58.9 84 32.1
FAN24G2384 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.8e-07 58.9 34 82.4
FAN28G2692 Fragaria x ananassa HOM05D008794 ORTHO05D013083 4.9e-07 58.5 67 47.8
PSO210G5494 Papaver somniferum HOM05D000107 ORTHO05D000062 4.9e-07 58.5 66 43.9
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 4.9e-07 58.5 128 30.5
RcHm_v2.0_Chr4g0403821 Rosa chinensis HOM05D000107 ORTHO05D000062 4.9e-07 58.5 147 29.3
CANSAT25G3231 Cannabis sativa HOM05D000107 ORTHO05D000062 6.4e-07 58.2 128 31.2
FAN05G0234 Fragaria x ananassa HOM05D007789 ORTHO05D008963 6.4e-07 58.2 70 41.4
FAN10G2265 Fragaria x ananassa HOM05D007789 ORTHO05D008963 6.4e-07 58.2 124 31.5
FAN15G3721 Fragaria x ananassa HOM05D007789 ORTHO05D008963 6.4e-07 58.2 66 42.4
FAN14G2015 Fragaria x ananassa HOM05D000514 ORTHO05D008963 8.4e-07 57.8 104 34.6
PSO210G7759 Papaver somniferum HOM05D000107 ORTHO05D000062 8.4e-07 57.8 66 42.4
PSO675G5616 Papaver somniferum HOM05D000107 ORTHO05D000062 8.4e-07 57.8 111 35.1
Atru.chr4.921 Acer truncatum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 73 34.2
FAN05G3176 Fragaria x ananassa HOM05D000514 ORTHO05D000222 1.1e-06 57.4 71 45.1
FAN26G0642 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.1e-06 57.4 70 41.4
FAN28G2775 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.1e-06 57.4 82 37.8
PSO210G6025 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-06 57.4 74 39.2
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 57.4 63 34.9
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 57.4 63 34.9
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-06 57.4 63 34.9
Actinidia07747 Actinidia chinensis HOM05D000107 ORTHO05D000062 1.4e-06 57.0 129 35.7
Aqoxy4G00524 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.4e-06 57.0 67 44.8
CANSAT35G0179 Cannabis sativa HOM05D000107 ORTHO05D000062 1.4e-06 57.0 117 33.3
FAN20G1175 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.4e-06 57.0 70 42.9
TWI31G1349 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.4e-06 57.0 47 48.9
EL10Ac8g19540 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-06 56.6 117 30.8
FAN28G1300 Fragaria x ananassa HOM05D007789 ORTHO05D008963 1.9e-06 56.6 70 41.4
Hma1.2p1_0371F.1_g138090 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 1.9e-06 56.6 69 39.1
PSO017G6416 Papaver somniferum HOM05D000107 ORTHO05D000062 1.9e-06 56.6 111 34.2
Rhsim02G0157900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-06 56.6 128 29.7
EL10Ac1g02032 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-06 56.2 117 30.8
CANSAT64G0850 Cannabis sativa HOM05D000107 ORTHO05D000062 2.4e-06 56.2 102 31.4
FAN28G1566 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.4e-06 56.2 100 36.0
CiPaw.11G164700 Carya illinoinensis HOM05D000107 ORTHO05D000062 3.2e-06 55.8 63 42.9
Migut.E01700 Erythranthe guttata HOM05D000107 ORTHO05D000062 3.2e-06 55.8 124 31.5
FAN22G1355 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.2e-06 55.8 106 34.0
PSO675G7714 Papaver somniferum HOM05D000107 ORTHO05D000062 3.2e-06 55.8 112 31.2
Rhsim05G0124400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-06 55.8 131 32.1
Rhsim07G0152200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-06 55.8 136 31.6
Rhsim11G0024300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-06 55.8 131 32.1
Atru.chr2.704 Acer truncatum HOM05D000107 ORTHO05D000062 4.2e-06 55.5 53 41.5
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 4.2e-06 55.5 116 31.0
FAN13G2010 Fragaria x ananassa HOM05D007789 ORTHO05D008963 4.2e-06 55.5 105 33.3
MBI08_g33343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.2e-06 55.5 94 35.1
FAN13G2082 Fragaria x ananassa HOM05D008794 ORTHO05D013083 5.4e-06 55.1 65 47.7
FAN26G3314 Fragaria x ananassa HOM05D001180 ORTHO05D013083 5.4e-06 55.1 65 46.2
Hma1.2p1_1173F.1_g263710 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 5.4e-06 55.1 71 38.0
PSO541G0392 Papaver somniferum HOM05D000107 ORTHO05D000062 5.4e-06 55.1 74 39.2
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 5.4e-06 55.1 130 27.7
RhsimUnG0041600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-06 55.1 121 29.8
FvH4_3g18963 Fragaria vesca HOM05D000107 ORTHO05D002484 7.1e-06 54.7 42 66.7
FAN09G2667 Fragaria x ananassa HOM05D007789 ORTHO05D008963 7.1e-06 54.7 95 34.7
MELO3C028826.2 Cucumis melo HOM05D001963 ORTHO05D001863 9.2e-06 54.3 66 37.9
FAN03G1815 Fragaria x ananassa HOM05D008794 ORTHO05D013083 9.2e-06 54.3 65 47.7
PSO675G0591 Papaver somniferum HOM05D000107 ORTHO05D000062 9.2e-06 54.3 123 31.7
Peaxi162Scf00436g00002 Petunia axillaris HOM05D000107 ORTHO05D000062 9.2e-06 54.3 124 31.5
Rhsim02G0157700 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-06 54.3 141 29.8
Rhsim05G0032900 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-06 54.3 141 29.8
Rhsim06G0126900 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-06 54.3 60 38.3
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-06 54.3 112 29.5
Rhsim11G0023200 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-06 54.3 131 31.3
RhsimUnG0063700 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-06 54.3 141 29.8


User provided reference genes

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