Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g07762 Fragaria vesca HOM05D042205 ORTHO05D002856 2.4e-290 1001.5 519 100.0
FvH4_5g07761 Fragaria vesca HOM05D042205 ORTHO05D002856 3.0e-59 233.8 165 73.9
FvH4_5g07800 Fragaria vesca HOM05D042205 ORTHO05D002856 1.6e-36 158.3 347 39.5
FAN18G1847 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.7e-35 152.5 220 45.0
FvH4_5g09402 Fragaria vesca HOM05D002727 ORTHO05D002856 2.4e-32 144.4 198 47.5
FvH4_6g53540 Fragaria vesca HOM05D002727 ORTHO05D002856 1.8e-27 128.3 216 39.8
FAN05G4306 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.3e-27 127.9 246 39.0
RcHm_v2.0_Chr2g0175581 Rosa chinensis HOM05D002727 ORTHO05D002856 3.0e-27 127.5 232 39.7
FAN14G5438 Fragaria x ananassa HOM05D002727 ORTHO05D002856 8.8e-27 125.9 246 39.0
Prupe.3G306500 Prunus persica HOM05D002727 ORTHO05D002856 2.1e-20 104.8 246 34.6
MD09G1010600 Malus domestica HOM05D002727 ORTHO05D002856 5.3e-16 90.1 261 31.4
FAN02G1828 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.6e-15 88.6 129 48.1
QL02p071341 Quercus lobata HOM05D002727 ORTHO05D002856 6.5e-14 83.2 211 34.6
CANSAT64G1895 Cannabis sativa HOM05D002727 ORTHO05D002856 2.5e-13 81.3 233 31.8
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 4.0e-11 73.9 239 30.1
Phvul.007G037300 Phaseolus vulgaris HOM05D002727 ORTHO05D002856 1.5e-10 72.0 212 31.1
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 3.3e-10 70.9 211 30.8
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 3.3e-10 70.9 211 30.3
VMungo0720G2475 Vigna mungo HOM05D002727 ORTHO05D002856 1.3e-09 68.9 210 31.0
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 2.2e-09 68.2 206 30.6
arahy.Tifrunner.gnm1.ann1.L56H08 Arachis hypogaea HOM05D002727 ORTHO05D002856 6.3e-09 66.6 236 30.5
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 6.3e-09 66.6 244 29.5
arahy.Tifrunner.gnm1.ann1.A4HJXM Arachis hypogaea HOM05D002727 ORTHO05D002856 8.2e-09 66.2 235 31.1
ClCG05G022230 Citrullus lanatus HOM05D002727 ORTHO05D002856 1.1e-08 65.9 207 30.4
Lsat_1_v5_gn_3_54560 Lactuca sativa HOM05D002727 ORTHO05D002856 1.8e-08 65.1 258 27.5
Manes.17G103100 Manihot esculenta HOM05D002727 ORTHO05D002856 1.8e-08 65.1 209 30.6
Glyma.20G124900 Glycine max HOM05D002727 ORTHO05D002856 3.1e-08 64.3 208 28.4
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 3.1e-08 64.3 232 29.3
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 3.1e-08 64.3 232 28.9
Glyma.10G265700 Glycine max HOM05D002727 ORTHO05D002856 7.0e-08 63.2 215 28.8
CDE04G0093 Ceratophyllum demersum HOM05D002727 ORTHO05D002856 9.1e-08 62.8 212 27.8
CsaV3_5G034890 Cucumis sativus L. HOM05D002727 ORTHO05D002856 9.1e-08 62.8 230 30.0
VMungo0720G0381 Vigna mungo HOM05D002727 ORTHO05D002856 2.7e-07 61.2 184 29.9
MELO3C012299.2 Cucumis melo HOM05D002727 ORTHO05D002856 3.5e-07 60.8 230 29.1
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 4.5e-07 60.5 190 26.8
Hma1.2p1_0951F.1_g240760 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 4.5e-07 60.5 226 29.6
Hma1.2p1_2764F.1_g328145 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 4.5e-07 60.5 226 29.6
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 5.9e-07 60.1 119 38.7
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 1.0e-06 59.3 92 38.0
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.0e-06 59.3 168 34.5
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.3e-06 58.9 92 38.0
Dinv16190 Davidia involucrata HOM05D002727 ORTHO05D002856 1.7e-06 58.5 223 26.5
Medtr1g108470 Medicago truncatula HOM05D002727 ORTHO05D002856 1.7e-06 58.5 218 26.6
FAN20G2548 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.2e-06 58.2 119 36.1
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.9e-06 57.8 120 35.8
Aqoxy1G00996 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 3.8e-06 57.4 215 24.7
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.0e-06 57.0 92 37.0
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 5.0e-06 57.0 226 29.2
QL01p002083 Quercus lobata HOM05D002727 ORTHO05D002856 5.0e-06 57.0 139 36.7
Sed0024961 Sechium edule HOM05D002727 ORTHO05D002856 6.5e-06 56.6 238 26.5


User provided reference genes

Program Settings