Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g07460 Fragaria vesca HOM05D005223 ORTHO05D006449 3.7e-126 454.9 236 100.0
FAN04G2946 Fragaria x ananassa HOM05D005223 ORTHO05D006449 2.1e-84 316.2 226 78.3
FvH4_5g07490 Fragaria vesca HOM05D005223 ORTHO05D006449 7.9e-84 314.3 226 78.3
FAN13G2650 Fragaria x ananassa HOM05D005223 ORTHO05D006449 7.9e-84 314.3 226 77.9
FAN18G3380 Fragaria x ananassa HOM05D005223 ORTHO05D006449 2.3e-83 312.8 226 77.9
RcHm_v2.0_Chr7g0191161 Rosa chinensis HOM05D005223 ORTHO05D006449 5.7e-74 281.6 228 70.6
Prupe.5G157000 Prunus persica HOM05D005223 ORTHO05D006449 4.2e-61 238.8 232 60.3
MD14G1163600 Malus domestica HOM05D005223 ORTHO05D006449 5.2e-59 231.9 229 58.5
Atru.chr9.1012 Acer truncatum HOM05D005223 ORTHO05D006449 1.1e-53 214.2 232 52.2
Haze_07276 Corylus avellana HOM05D005223 ORTHO05D006449 1.4e-51 207.2 229 53.3
CANSAT80G2773 Cannabis sativa HOM05D005223 ORTHO05D006449 5.2e-51 205.3 229 50.7
QL10p005060 Quercus lobata HOM05D005223 ORTHO05D006449 6.8e-51 204.9 227 52.9
Manes.06G115300 Manihot esculenta HOM05D005223 ORTHO05D006449 1.3e-49 200.7 229 51.5
Potri.015G090700 Populus trichocarpa HOM05D005223 ORTHO05D006449 1.3e-49 200.7 232 53.9
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 1.3e-49 200.7 233 52.4
CiPaw.12G035700 Carya illinoinensis HOM05D005223 ORTHO05D006449 1.7e-49 200.3 231 55.0
Cfa018892 Carpinus fangiana HOM05D005223 ORTHO05D006449 8.3e-49 198.0 228 53.5
FvH4_5g07361 Fragaria vesca HOM05D005223 ORTHO05D006449 8.3e-49 198.0 226 56.6
Medtr3g075100 Medicago truncatula HOM05D005223 ORTHO05D006449 8.3e-49 198.0 221 49.8
Thecc.03G122800 Theobroma cacao HOM05D005223 ORTHO05D006449 1.1e-48 197.6 225 52.0
Lj1g0000662 Lotus japonicus HOM05D005223 ORTHO05D006449 2.4e-48 196.4 230 50.9
AT3G48470 Arabidopsis thaliana HOM05D005223 ORTHO05D006449 4.1e-48 195.7 230 49.6
Duzib084G0239 Durio zibethinus HOM05D005223 ORTHO05D006449 9.1e-48 194.5 230 51.3
VMungo1309G0017 Vigna mungo HOM05D005223 ORTHO05D006449 1.2e-47 194.1 230 49.6
TWI14G1297 Tripterygium wilfordii HOM05D005223 ORTHO05D006449 2.0e-47 193.4 228 50.4
arahy.Tifrunner.gnm1.ann1.D4E4RT Arachis hypogaea HOM05D005223 ORTHO05D006449 5.9e-47 191.8 230 50.0
Phvul.009G168800 Phaseolus vulgaris HOM05D005223 ORTHO05D006449 5.9e-47 191.8 230 50.4
Ca_16089_v3 Cicer arietinum L. HOM05D005223 ORTHO05D006449 7.7e-47 191.4 223 49.3
Lalb_Chr08g0236961 Lupinus albus HOM05D005223 ORTHO05D006449 2.2e-46 189.9 221 51.1
Ciclev10018616m.g Citrus clementina HOM05D005223 ORTHO05D006449 5.0e-46 188.7 231 48.1
Gohir.A07G053500 Gossypium hirsutum HOM05D005223 ORTHO05D006449 8.5e-46 188.0 225 51.1
Hma1.2p1_0123F.1_g058130 Hydrangea macrophylla HOM05D005223 ORTHO05D006449 8.5e-46 188.0 235 46.0
Nn4g22461 Nelumbo nucifera HOM05D005223 ORTHO05D006449 8.5e-46 188.0 230 48.7
TAR629G2346 Trochodendron aralioides HOM05D005223 ORTHO05D006449 8.5e-46 188.0 231 48.5
GSVIVG01007540001 Vitis vinifera HOM05D005223 ORTHO05D006449 8.5e-46 188.0 267 45.7
THA.LOC104818196 Tarenaya hassleriana HOM05D005223 ORTHO05D006449 4.2e-45 185.7 223 50.2
AL5G27880 Arabidopsis lyrata HOM05D005223 ORTHO05D006449 1.2e-44 184.1 230 46.5
Rhsim08G0185000 Rhododendron simsii HOM05D005223 ORTHO05D006449 2.7e-44 183.0 234 46.2
Actinidia19387 Actinidia chinensis HOM05D005223 ORTHO05D006449 3.6e-44 182.6 233 47.2
Psat5g141880 Pisum sativum HOM05D005223 ORTHO05D006449 3.6e-44 182.6 226 47.3
Gohir.D07G057900 Gossypium hirsutum HOM05D005223 ORTHO05D006449 8.0e-44 181.4 225 49.8
Gorai.001G061400 Gossypium raimondii HOM05D005223 ORTHO05D006449 1.4e-43 180.6 225 49.3
SGA_v2.0_scaffold457G51932 Striga asiatica HOM05D005223 ORTHO05D006449 1.4e-43 180.6 228 47.8
TPR.G13978 Trifolium pratense HOM05D005223 ORTHO05D006449 1.4e-43 180.6 220 48.2
MSTRG.11293 Avicennia marina HOM05D005223 ORTHO05D006449 1.8e-43 180.3 227 48.9
CsaV3_1G009290 Cucumis sativus L. HOM05D005223 ORTHO05D006449 2.3e-43 179.9 230 47.4
Dinv38469 Davidia involucrata HOM05D005223 ORTHO05D006449 1.5e-42 177.2 207 50.2
Carub.0005s1465 Capsella rubella HOM05D005223 ORTHO05D006449 2.0e-42 176.8 230 46.5
vmacro19239 Vaccinium macrocarpon HOM05D005223 ORTHO05D006449 3.4e-42 176.0 244 45.9
Migut.I00475 Erythranthe guttata HOM05D005223 ORTHO05D006449 4.4e-42 175.6 227 46.3
CARHR157230 Cardamine hirsuta HOM05D005223 ORTHO05D006449 5.7e-42 175.3 230 45.7
Glyma.04G193000 Glycine max HOM05D005223 ORTHO05D006449 5.7e-42 175.3 230 47.4
MELO3C002332.2 Cucumis melo HOM05D005223 ORTHO05D006449 1.3e-41 174.1 230 46.5
Sp5g13560 Schrenkiella parvula HOM05D005223 ORTHO05D006449 1.3e-41 174.1 234 45.7
Eucgr.L01337 Eucalyptus grandis HOM05D005223 ORTHO05D006449 2.2e-41 173.3 220 46.4
Nitab4.5_0000955g0070 Nicotiana tabacum HOM05D005223 ORTHO05D006449 2.2e-41 173.3 228 47.8
Aqoxy5G03583 Aquilegia oxysepala HOM05D005223 ORTHO05D006449 4.9e-41 172.2 233 47.2
Thhalv10010098m.g Eutrema salsugineum HOM05D005223 ORTHO05D006449 4.9e-41 172.2 231 44.6
Lj9C475T6 Lonicera japonica HOM05D005223 ORTHO05D006449 6.3e-41 171.8 228 45.2
Nitab4.5_0002775g0020 Nicotiana tabacum HOM05D005223 ORTHO05D006449 1.1e-40 171.0 229 45.4
CSS0037650 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 1.8e-40 170.2 225 45.8
ClCG03G003490 Citrullus lanatus HOM05D005223 ORTHO05D006449 1.8e-40 170.2 224 47.3
Oeu057221.1 Olea europaea HOM05D005223 ORTHO05D006449 2.4e-40 169.9 227 43.2
PGR083G1937 Punica granatum HOM05D005223 ORTHO05D006449 1.2e-39 167.5 222 47.3
Sed0011232 Sechium edule HOM05D005223 ORTHO05D006449 4.5e-39 165.6 230 45.7
Eucgr.B00148 Eucalyptus grandis HOM05D005223 ORTHO05D006449 5.9e-39 165.2 226 44.2
PGSC0003DMG400025026 Solanum tuberosum HOM05D005223 ORTHO05D006449 2.3e-38 163.3 218 45.4
Solyc10g006780.4 Solanum lycopersicum HOM05D005223 ORTHO05D006449 2.9e-38 162.9 216 45.8
CAN.G1110.40 Capsicum annuum HOM05D005223 ORTHO05D006449 6.6e-38 161.8 218 44.0
Cc04_g10370 Coffea canephora HOM05D005223 ORTHO05D006449 6.6e-38 161.8 213 46.0
CSS0005553 Camellia sinensis var. sinensis HOM05D005223 ORTHO05D006449 1.9e-37 160.2 229 43.7
ECA246G2102 Erigeron canadensis HOM05D005223 ORTHO05D006449 1.9e-37 160.2 228 44.7
MBI11_g36316_MAGBIO Magnolia biondii HOM05D005223 ORTHO05D006449 3.3e-37 159.5 237 44.7
Sopen10g002700 Solanum pennellii HOM05D005223 ORTHO05D006449 1.6e-36 157.1 216 44.9
BolC3t18905H Brassica oleracea HOM05D005223 ORTHO05D006449 3.6e-36 156.0 225 45.3
BcaC01g02344 Brassica carinata HOM05D005223 ORTHO05D006449 6.1e-36 155.2 225 45.3
BraA06t25704Z Brassica rapa HOM05D005223 ORTHO05D006449 8.0e-36 154.8 225 45.8
C03p66340 Brassica napus HOM05D005223 ORTHO05D006449 1.8e-35 153.7 225 44.9
PSO063G1058 Papaver somniferum HOM05D005223 ORTHO05D006449 3.0e-35 152.9 233 40.3
BcaB02g10650 Brassica carinata HOM05D005223 ORTHO05D006449 4.0e-35 152.5 221 44.3
A06p27680 Brassica napus HOM05D005223 ORTHO05D006449 5.2e-35 152.1 226 42.9
Lsat_1_v5_gn_5_13240 Lactuca sativa HOM05D005223 ORTHO05D006449 6.8e-35 151.8 215 44.7
SalBow5G2547 Salvia bowleyana HOM05D005223 ORTHO05D006449 2.0e-34 150.2 259 37.5
HanXRQChr05g0154741 Helianthus annuus HOM05D005223 ORTHO05D006449 2.9e-33 146.4 229 42.8
CDE02G2587 Ceratophyllum demersum HOM05D005223 ORTHO05D006449 4.6e-31 139.0 234 38.5
DCAR_021603 Daucus carota HOM05D005223 ORTHO05D006449 1.0e-30 137.9 227 40.1
Cpa.g.sc52.34 Carica papaya HOM05D005223 ORTHO05D006449 4.3e-29 132.5 213 38.5
Aa31LG4G17050 Aethionema arabicum HOM05D005223 ORTHO05D006449 3.1e-27 126.3 207 37.7
ATR0824G104 Amborella trichopoda HOM05D005223 ORTHO05D006449 2.0e-26 123.6 223 38.1
FvH4_3g25520 Fragaria vesca HOM05D005223 ORTHO05D006449 4.4e-26 122.5 89 73.0
Hund18539 Selenicereus undatus HOM05D005223 ORTHO05D006449 1.6e-23 114.0 181 39.8
Sc10g0010350 Simmondsia chinensis HOM05D005223 ORTHO05D006449 2.5e-21 106.7 166 42.8
Os02g0598800 Oryza sativa ssp. japonica HOM05D005223 ORTHO05D006449 4.3e-21 105.9 223 32.3
Peaxi162Scf00536g00422 Petunia axillaris HOM05D005223 ORTHO05D006449 3.1e-19 99.8 227 32.2
Zm00001eb246300 Zea mays HOM05D005223 ORTHO05D006449 2.2e-17 93.6 233 30.9
EL10Ac7g18074 Beta vulgaris HOM05D005223 ORTHO05D006449 3.7e-17 92.8 227 32.6
SGA_v2.0_scaffold50G18602 Striga asiatica HOM05D005223 ORTHO05D006449 2.7e-15 86.7 228 33.8
AUR62025728 Chenopodium quinoa HOM05D005223 ORTHO05D006449 7.8e-15 85.1 223 31.8
SEGI_02888 Sequoiadendron giganteum HOM05D005223 ORTHO05D006449 3.9e-14 82.8 231 28.6
QL10p005098 Quercus lobata HOM05D005223 ORTHO05D006449 1.5e-13 80.9 162 36.4
AUR62001278 Chenopodium quinoa HOM05D005223 ORTHO05D006449 3.6e-12 76.3 210 30.5
MD06G1154000 Malus domestica HOM05D005223 ORTHO05D006449 7.1e-08 62.0 46 65.2


User provided reference genes

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