Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g06300 Fragaria vesca HOM05D008921 ORTHO05D010506 1.4e-68 262.7 124 100.0
FAN18G0512 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.4e-68 262.7 124 100.0
FAN08G0942 Fragaria x ananassa HOM05D008921 ORTHO05D010506 3.3e-65 251.5 124 95.2
FAN04G2975 Fragaria x ananassa HOM05D008921 ORTHO05D010506 9.6e-65 250.0 124 96.0
RcHm_v2.0_Chr7g0192561 Rosa chinensis HOM05D008921 ORTHO05D010506 9.3e-52 206.8 128 79.7
FAN13G1719 Fragaria x ananassa HOM05D008921 ORTHO05D010506 1.1e-44 183.3 105 84.8
Prupe.6G157600 Prunus persica HOM05D008921 ORTHO05D010506 1.8e-31 139.4 117 61.5
Prupe.5G165500 Prunus persica HOM05D008921 ORTHO05D010506 1.7e-29 132.9 120 59.2
CSS0048204 Camellia sinensis var. sinensis HOM05D008921 ORTHO05D010506 1.4e-18 96.7 124 46.0
Hma1.2p1_0046F.1_g027140 Hydrangea macrophylla HOM05D008921 ORTHO05D010506 1.8e-18 96.3 112 47.3
Cfa019218 Carpinus fangiana HOM05D008921 ORTHO05D010506 1.1e-15 87.0 130 37.7
Haze_07588 Corylus avellana HOM05D008921 ORTHO05D010506 2.4e-15 85.9 129 41.9
Cfa019220 Carpinus fangiana HOM05D008921 ORTHO05D010506 7.7e-14 80.9 126 40.5
Sabra12G0061700 Salix brachista HOM05D008921 ORTHO05D010506 7.7e-14 80.9 119 42.9
Potri.012G085800 Populus trichocarpa HOM05D008921 ORTHO05D010506 8.5e-13 77.4 112 41.1
Cpa.g.sc159.19 Carica papaya HOM05D008921 ORTHO05D010506 3.6e-11 72.0 118 35.6
Atru.chr9.2579 Acer truncatum HOM05D008921 ORTHO05D010506 8.0e-11 70.9 130 37.7
Thecc.03G025900 Theobroma cacao HOM05D008921 ORTHO05D010506 8.0e-11 70.9 136 39.7
TAR622G0966 Trochodendron aralioides HOM05D008921 ORTHO05D010506 4.0e-10 68.6 132 34.8
Lj5g0011006 Lotus japonicus HOM05D010415 ORTHO05D013002 3.4e-09 65.5 111 39.6
Manes.14G060500 Manihot esculenta HOM05D008921 ORTHO05D010506 7.5e-09 64.3 111 34.2
Nitab4.5_0000025g0320 Nicotiana tabacum HOM05D012681 ORTHO05D010506 9.8e-09 63.9 117 33.3
Gorai.003G115500 Gossypium raimondii HOM05D008921 ORTHO05D010506 1.3e-08 63.5 127 35.4
Nitab4.5_0001566g0030 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.2e-08 62.8 121 33.9
Rhsim08G0177800 Rhododendron simsii HOM05D008921 ORTHO05D010506 2.2e-08 62.8 104 40.4
COL.COLO4_36759 Corchorus olitorius HOM05D008921 ORTHO05D010506 6.3e-08 61.2 127 33.1
Gohir.D03G109400 Gossypium hirsutum HOM05D008921 ORTHO05D010506 6.3e-08 61.2 127 34.6
Peaxi162Scf00801g00022 Petunia axillaris HOM05D012681 ORTHO05D010506 6.3e-08 61.2 115 35.7
Peaxi162Scf00089g00137 Petunia axillaris HOM05D012681 ORTHO05D010506 1.4e-07 60.1 110 34.5
Nitab4.5_0010452g0020 Nicotiana tabacum HOM05D016190 ORTHO05D017486 1.8e-07 59.7 130 34.6
Aqoxy5G03744 Aquilegia oxysepala HOM05D008921 ORTHO05D010506 2.4e-07 59.3 112 36.6
Phvul.003G205100 Phaseolus vulgaris HOM05D010415 ORTHO05D013002 2.4e-07 59.3 109 34.9
Nitab4.5_0010452g0050 Nicotiana tabacum HOM05D012681 ORTHO05D010506 7.0e-07 57.8 125 32.0
Glyma.17G084600 Glycine max HOM05D010415 ORTHO05D013002 1.6e-06 56.6 109 34.9
Nitab4.5_0001793g0040 Nicotiana tabacum HOM05D012681 ORTHO05D010506 2.0e-06 56.2 108 31.5


User provided reference genes

Program Settings