Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g06040 Fragaria vesca HOM05D001739 ORTHO05D029422 0.0e+00 1092.4 560 100.0
FAN18G1935 Fragaria x ananassa HOM05D001739 ORTHO05D029422 3.1e-272 941.4 490 98.6
FAN08G1830 Fragaria x ananassa HOM05D001739 ORTHO05D004575 9.8e-242 840.1 568 79.8
FvH4_5g05990 Fragaria vesca HOM05D001739 ORTHO05D029422 2.1e-215 752.7 566 73.5
FAN18G0943 Fragaria x ananassa HOM05D001739 ORTHO05D029422 1.9e-205 719.5 568 71.5
FAN04G1381 Fragaria x ananassa HOM05D001739 ORTHO05D004575 5.3e-94 349.4 224 80.8
FvH4_1g13570 Fragaria vesca HOM05D001739 ORTHO05D004575 1.2e-82 311.6 514 39.9
Prupe.7G193800 Prunus persica HOM05D001739 ORTHO05D004575 1.2e-82 311.6 520 41.7
FvH4_1g13610 Fragaria vesca HOM05D001739 ORTHO05D004575 1.0e-81 308.5 513 39.6
RcHm_v2.0_Chr2g0095731 Rosa chinensis HOM05D001739 ORTHO05D004575 1.3e-81 308.1 481 42.2
FAN19G0770 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.3e-81 307.4 513 39.6
FvH4_1g09210 Fragaria vesca HOM05D001739 ORTHO05D004575 3.7e-79 300.1 481 41.4
FAN23G1590 Fragaria x ananassa HOM05D001739 ORTHO05D004575 4.0e-78 296.6 481 41.2
MD15G1221900 Malus domestica HOM05D001739 ORTHO05D004575 4.0e-78 296.6 472 42.4
FAN19G0975 Fragaria x ananassa HOM05D001739 ORTHO05D004575 6.9e-78 295.8 481 41.2
FAN26G1120 Fragaria x ananassa HOM05D001739 ORTHO05D004575 3.4e-77 293.5 481 40.5
FAN26G0091 Fragaria x ananassa HOM05D001739 ORTHO05D004575 5.8e-77 292.7 481 40.5
Prupe.6G204500 Prunus persica HOM05D001739 ORTHO05D004575 7.6e-77 292.4 520 39.0
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 1.4e-75 288.1 485 40.6
Dinv25520 Davidia involucrata HOM05D001739 ORTHO05D004575 2.5e-75 287.3 473 39.1
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 1.6e-74 284.6 475 40.2
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 1.8e-73 281.2 468 40.0
Atru.chr7.1752 Acer truncatum HOM05D001739 ORTHO05D004575 3.0e-73 280.4 486 39.9
FAN28G0236 Fragaria x ananassa HOM05D001739 ORTHO05D004575 3.0e-73 280.4 512 38.7
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 5.1e-73 279.6 486 37.9
MD02G1099100 Malus domestica HOM05D001739 ORTHO05D004575 6.7e-73 279.3 446 41.7
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 1.9e-72 277.7 475 38.3
Lj7C690T11 Lonicera japonica HOM05D001739 ORTHO05D004575 3.3e-72 276.9 468 39.3
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 5.7e-72 276.2 474 38.4
COL.COLO4_21223 Corchorus olitorius HOM05D001739 ORTHO05D004575 2.8e-71 273.9 467 40.0
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 3.7e-71 273.5 476 37.2
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 6.3e-71 272.7 473 38.3
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 6.3e-71 272.7 466 38.6
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 3.1e-70 270.4 481 38.3
TAR383G0739 Trochodendron aralioides HOM05D001739 ORTHO05D004575 9.0e-70 268.9 474 37.1
ClCG03G014800 Citrullus lanatus HOM05D001739 ORTHO05D004575 1.2e-69 268.5 473 38.9
MELO3C015548.2 Cucumis melo HOM05D001739 ORTHO05D004575 2.0e-69 267.7 482 39.0
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 2.0e-69 267.7 473 38.5
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 2.6e-69 267.3 482 36.9
FAN26G0455 Fragaria x ananassa HOM05D001739 ORTHO05D004575 3.4e-69 266.9 510 36.3
Gorai.001G017100 Gossypium raimondii HOM05D001739 ORTHO05D004575 5.9e-69 266.2 468 39.5
CsaV3_1G041350 Cucumis sativus L. HOM05D001739 ORTHO05D004575 1.0e-68 265.4 482 39.0
Gohir.D07G016300 Gossypium hirsutum HOM05D001739 ORTHO05D004575 1.0e-68 265.4 468 39.3
Prupe.7G186700 Prunus persica HOM05D001739 ORTHO05D004575 2.9e-68 263.8 518 38.0
Duzib168G0208 Durio zibethinus HOM05D001739 ORTHO05D004575 3.8e-68 263.5 477 38.2
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 5.0e-68 263.1 482 37.6
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 5.0e-68 263.1 479 36.1
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 5.0e-68 263.1 476 36.1
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 6.5e-68 262.7 468 38.7
CSS0017458 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D004575 8.5e-68 262.3 473 36.8
RcHm_v2.0_Chr2g0094991 Rosa chinensis HOM05D001739 ORTHO05D029616 2.1e-66 257.7 531 37.7
Cfa002954 Carpinus fangiana HOM05D001739 ORTHO05D004575 2.7e-66 257.3 509 36.7
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 2.7e-66 257.3 479 37.0
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 2.7e-66 257.3 436 38.3
RcHm_v2.0_Chr2g0095131 Rosa chinensis HOM05D001739 ORTHO05D015654 4.6e-66 256.5 536 36.8
Thecc.09G071800 Theobroma cacao HOM05D001739 ORTHO05D004575 4.6e-66 256.5 476 37.4
RcHm_v2.0_Chr2g0095061 Rosa chinensis HOM05D001739 ORTHO05D029616 1.0e-65 255.4 542 37.1
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 1.4e-65 255.0 477 36.1
Ca_09790_v3 Cicer arietinum L. HOM05D001739 ORTHO05D004575 2.3e-65 254.2 483 36.4
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 3.0e-65 253.8 480 35.8
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 3.0e-65 253.8 477 36.3
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 3.0e-65 253.8 571 34.7
CiPaw.03G202600 Carya illinoinensis HOM05D001739 ORTHO05D004575 3.9e-65 253.4 482 35.9
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 8.8e-65 252.3 476 35.7
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 2.0e-64 251.1 478 34.7
TPR.G18558 Trifolium pratense HOM05D001739 ORTHO05D004575 2.0e-64 251.1 482 36.7
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 2.5e-64 250.8 481 36.2
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 2.5e-64 250.8 473 35.5
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 5.7e-64 249.6 470 36.8
Lalb_Chr13g0299281 Lupinus albus HOM05D001739 ORTHO05D004575 1.3e-63 248.4 475 36.6
FAN10G4203 Fragaria x ananassa HOM05D001739 ORTHO05D029616 2.2e-63 247.7 597 33.8
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 2.8e-63 247.3 477 35.8
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 4.8e-63 246.5 480 35.4
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 1.8e-62 244.6 478 36.0
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 5.3e-62 243.0 481 36.0
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 1.2e-61 241.9 493 35.1
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 1.2e-61 241.9 420 38.1
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 1.2e-61 241.9 473 36.2
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 1.5e-61 241.5 478 35.4
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 2.0e-61 241.1 471 36.5
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 2.6e-61 240.7 502 36.3
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 1.0e-60 238.8 489 35.0
FAN26G3315 Fragaria x ananassa HOM05D001739 ORTHO05D025407 1.7e-60 238.0 542 37.5
FAN19G2992 Fragaria x ananassa HOM05D001739 ORTHO05D015654 3.8e-60 236.9 538 34.0
HanXRQChr04g0122371 Helianthus annuus HOM05D001739 ORTHO05D004575 5.0e-60 236.5 469 36.0
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 7.2e-59 232.6 475 35.2
Psat6g134600 Pisum sativum HOM05D001739 ORTHO05D004575 9.4e-59 232.3 606 32.7
FAN19G1672 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.6e-58 231.5 519 34.5
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 2.1e-58 231.1 478 34.1
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea HOM05D001739 ORTHO05D004575 4.7e-58 229.9 466 34.3
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 4.7e-58 229.9 474 34.6
FvH4_1g08660 Fragaria vesca HOM05D001739 ORTHO05D025407 1.1e-56 225.3 536 35.3
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 2.0e-56 224.6 486 33.3
Nitab4.5_0001565g0110 Nicotiana tabacum HOM05D001739 ORTHO05D004575 2.2e-55 221.1 533 33.0
Cc06_g12580 Coffea canephora HOM05D001739 ORTHO05D004575 2.8e-55 220.7 470 33.2
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 8.2e-55 219.2 482 33.2
Psat7g002920 Pisum sativum HOM05D001739 ORTHO05D004575 1.1e-54 218.8 475 33.9
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 1.4e-54 218.4 479 33.8
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 1.8e-54 218.0 505 32.9
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.8e-54 218.0 488 33.8
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 1.2e-53 215.3 475 33.7
SHI02768 Sapria himalayana HOM05D001739 ORTHO05D004575 1.5e-53 214.9 467 34.9
FvH4_1g08730 Fragaria vesca HOM05D001739 ORTHO05D015654 2.0e-53 214.5 538 33.3
THA.LOC104809049 Tarenaya hassleriana HOM05D001739 ORTHO05D004575 2.0e-53 214.5 484 32.4
TPR.G13945 Trifolium pratense HOM05D001739 ORTHO05D004575 3.5e-53 213.8 471 34.2
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.0e-52 212.2 477 33.1
FAN26G0106 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.7e-52 211.5 524 33.8
FvH4_1g08691 Fragaria vesca HOM05D001739 ORTHO05D015654 3.8e-52 210.3 542 33.8
FvH4_1g08670 Fragaria vesca HOM05D001739 ORTHO05D025407 6.5e-52 209.5 589 32.4
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 1.1e-51 208.8 486 31.1
Solyc07g042380.4 Solanum lycopersicum HOM05D001739 ORTHO05D004575 2.5e-51 207.6 477 33.3
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 7.2e-51 206.1 476 32.6
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 9.4e-51 205.7 358 36.9
unitig_744.g24652 Utricularia gibba HOM05D001739 ORTHO05D004575 2.1e-50 204.5 484 32.4
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 2.7e-50 204.1 454 34.1
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 8.0e-50 202.6 478 32.4
Haze_26051 Corylus avellana HOM05D001739 ORTHO05D004575 3.9e-49 200.3 509 32.4
AUR62028280 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.8e-46 191.4 486 31.3
FAN26G3321 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.8e-46 191.4 524 31.9
Aa31LG9G14080 Aethionema arabicum HOM05D001739 ORTHO05D004575 1.6e-45 188.3 477 33.3
Sp4g16630 Schrenkiella parvula HOM05D001739 ORTHO05D004575 5.9e-45 186.4 481 33.1
Peaxi162Scf00191g01112 Petunia axillaris HOM05D001739 ORTHO05D004575 1.0e-44 185.7 477 31.4
AT2G34357 Arabidopsis thaliana HOM05D001739 ORTHO05D004575 1.7e-44 184.9 474 31.9
BcaB02g09558 Brassica carinata HOM05D001739 ORTHO05D004575 2.9e-44 184.1 479 32.4
Thhalv10016153m.g Eutrema salsugineum HOM05D001739 ORTHO05D004575 2.9e-44 184.1 476 31.5
BolC3t14614H Brassica oleracea HOM05D001739 ORTHO05D004575 3.8e-44 183.7 485 33.4
AL4G30320 Arabidopsis lyrata HOM05D001739 ORTHO05D004575 6.5e-44 183.0 485 32.6
BraA03t11167Z Brassica rapa HOM05D001739 ORTHO05D004575 8.5e-44 182.6 485 33.2
BcaC01g05798 Brassica carinata HOM05D001739 ORTHO05D004575 1.1e-43 182.2 485 33.0
FvH4_1g08750 Fragaria vesca HOM05D001739 ORTHO05D015654 1.5e-43 181.8 538 30.7
C03p22320 Brassica napus HOM05D001739 ORTHO05D004575 3.2e-43 180.6 485 33.0
A03p19100 Brassica napus HOM05D001739 ORTHO05D004575 5.5e-43 179.9 483 33.1
BcaB01g03896 Brassica carinata HOM05D001739 ORTHO05D004575 9.4e-43 179.1 493 33.5
BcaC02g11500 Brassica carinata HOM05D001739 ORTHO05D004575 1.2e-42 178.7 480 31.7
C04p14660 Brassica napus HOM05D001739 ORTHO05D004575 6.1e-42 176.4 485 32.0
BolC4t23047H Brassica oleracea HOM05D001739 ORTHO05D004575 6.1e-42 176.4 485 32.0
CDE04G0230 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 8.0e-42 176.0 326 36.5
BraA05t20081Z Brassica rapa HOM05D001739 ORTHO05D004575 1.0e-41 175.6 480 32.7
FAN26G3373 Fragaria x ananassa HOM05D001739 ORTHO05D015654 2.3e-41 174.5 530 31.1
Carub.0004s1602 Capsella rubella HOM05D001739 ORTHO05D004575 3.0e-41 174.1 476 30.7
CARHR128440 Cardamine hirsuta HOM05D001739 ORTHO05D004575 8.8e-41 172.6 476 31.1
A05p11320 Brassica napus HOM05D001739 ORTHO05D004575 2.6e-40 171.0 481 32.6
BcaC02g11606 Brassica carinata HOM05D001739 ORTHO05D004575 7.5e-40 169.5 485 32.8
C04p13350 Brassica napus HOM05D001739 ORTHO05D004575 7.5e-40 169.5 485 32.8
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 4.8e-39 166.8 366 32.8
FAN04G1085 Fragaria x ananassa HOM05D001739 ORTHO05D201578 2.7e-37 161.0 157 65.0
SEGI_37036 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 5.9e-37 159.8 447 30.0
CAN.G333.15 Capsicum annuum HOM05D001739 ORTHO05D004575 1.6e-34 151.8 301 36.2
FAN26G1945 Fragaria x ananassa HOM05D001739 ORTHO05D035581 2.7e-34 151.0 535 30.3
FvH4_7g02570 Fragaria vesca HOM05D001739 ORTHO05D029616 8.8e-33 146.0 223 42.2
Pp3c2_3190 Physcomitrium patens HOM05D001739 ORTHO05D004575 1.2e-32 145.6 477 27.5
FAN23G1058 Fragaria x ananassa HOM05D001739 ORTHO05D025407 3.1e-30 137.5 342 34.8
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 9.1e-30 136.0 463 26.6
FAN19G0960 Fragaria x ananassa HOM05D001739 ORTHO05D025407 3.8e-28 130.6 342 33.9
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 5.5e-27 126.7 487 24.4
AUR62025277 Chenopodium quinoa HOM05D001739 ORTHO05D004575 9.5e-27 125.9 219 36.5
Sc18g0003470 Simmondsia chinensis HOM05D001739 ORTHO05D004575 6.1e-26 123.2 213 38.0
FAN28G1182 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.4e-25 122.1 124 55.6
SEGI_16086 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 1.2e-24 119.0 473 24.7
FAN23G2998 Fragaria x ananassa HOM05D001739 ORTHO05D198978 1.4e-22 112.1 226 35.0
SMO361G0459 Selaginella moellendorffii HOM05D001739 ORTHO05D004575 1.6e-21 108.6 481 23.9
FAN26G3327 Fragaria x ananassa HOM05D001739 ORTHO05D015654 5.9e-21 106.7 273 34.4
Eucgr.C00777 Eucalyptus grandis HOM05D001739 ORTHO05D004575 2.5e-19 101.3 127 44.9
MD02G1098900 Malus domestica HOM05D001739 ORTHO05D004575 5.6e-19 100.1 184 36.4
FAN28G3010 Fragaria x ananassa HOM05D001739 ORTHO05D207861 2.0e-16 91.7 165 39.4
FAN26G1219 Fragaria x ananassa HOM05D001739 ORTHO05D210162 1.6e-13 82.0 151 37.1
Ciclev10006456m.g Citrus clementina HOM05D001739 ORTHO05D006605 8.6e-12 76.3 470 23.4
FAN23G2122 Fragaria x ananassa HOM05D001739 ORTHO05D035581 2.5e-11 74.7 140 40.7
FAN19G1997 Fragaria x ananassa HOM05D001739 ORTHO05D015654 4.3e-11 73.9 199 31.7
Rhsim13G0126900 Rhododendron simsii HOM05D001739 ORTHO05D004575 2.8e-10 71.2 118 35.6
CDE12G0742 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 6.2e-10 70.1 122 37.7
TPR.G10174 Trifolium pratense HOM05D001739 ORTHO05D004575 1.4e-09 68.9 251 25.1
Duzib093G0255 Durio zibethinus HOM05D001739 ORTHO05D006605 8.9e-09 66.2 460 21.5
EL10Ac8g19019 Beta vulgaris HOM05D001739 ORTHO05D010736 9.8e-08 62.8 152 31.6
FvH4_1g21223 Fragaria vesca HOM05D001739 ORTHO05D198449 9.8e-08 62.8 55 60.0
CARHR230910 Cardamine hirsuta HOM05D001739 ORTHO05D006605 1.3e-07 62.4 477 22.2
AL7G29870 Arabidopsis lyrata HOM05D001739 ORTHO05D006605 2.2e-07 61.6 478 22.6


User provided reference genes

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