Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g05990 Fragaria vesca HOM05D001739 ORTHO05D029422 1.8e-279 965.3 500 100.0
FAN18G0943 Fragaria x ananassa HOM05D001739 ORTHO05D029422 1.8e-266 922.2 500 96.8
FAN08G1830 Fragaria x ananassa HOM05D001739 ORTHO05D004575 3.2e-220 768.5 567 76.0
FvH4_5g06040 Fragaria vesca HOM05D001739 ORTHO05D029422 5.4e-215 751.1 566 73.5
FAN18G1935 Fragaria x ananassa HOM05D001739 ORTHO05D029422 3.5e-182 642.1 490 72.4
FAN04G1381 Fragaria x ananassa HOM05D001739 ORTHO05D004575 6.8e-85 318.9 224 78.6
Prupe.7G193800 Prunus persica HOM05D001739 ORTHO05D004575 5.6e-63 246.1 470 38.3
FvH4_1g13570 Fragaria vesca HOM05D001739 ORTHO05D004575 8.1e-62 242.3 510 35.5
FvH4_1g13610 Fragaria vesca HOM05D001739 ORTHO05D004575 1.8e-61 241.1 483 36.9
FAN19G0770 Fragaria x ananassa HOM05D001739 ORTHO05D004575 4.0e-61 240.0 483 36.9
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 4.0e-61 240.0 463 35.2
Dinv25520 Davidia involucrata HOM05D001739 ORTHO05D004575 1.5e-60 238.0 472 35.8
RcHm_v2.0_Chr2g0095731 Rosa chinensis HOM05D001739 ORTHO05D004575 4.4e-60 236.5 472 37.5
FvH4_1g09210 Fragaria vesca HOM05D001739 ORTHO05D004575 1.7e-59 234.6 472 36.7
FAN19G0975 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.4e-58 231.5 472 36.4
Prupe.6G204500 Prunus persica HOM05D001739 ORTHO05D004575 3.2e-58 230.3 470 36.2
FAN23G1590 Fragaria x ananassa HOM05D001739 ORTHO05D004575 9.3e-58 228.8 472 36.2
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 2.1e-57 227.6 464 34.1
FAN26G0091 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.7e-57 227.3 472 35.8
MD15G1221900 Malus domestica HOM05D001739 ORTHO05D004575 3.5e-57 226.9 512 36.1
FAN26G1120 Fragaria x ananassa HOM05D001739 ORTHO05D004575 6.0e-57 226.1 472 35.8
CSS0017458 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D004575 7.8e-57 225.7 459 34.6
Atru.chr7.1752 Acer truncatum HOM05D001739 ORTHO05D004575 1.0e-56 225.3 477 35.2
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 6.6e-56 222.6 465 35.7
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 1.1e-55 221.9 464 35.6
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 1.1e-55 221.9 463 35.9
Lj7C690T11 Lonicera japonica HOM05D001739 ORTHO05D004575 4.3e-55 219.9 466 34.5
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 7.3e-55 219.2 467 33.4
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 1.3e-54 218.4 465 34.2
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 1.6e-54 218.0 475 34.9
Prupe.7G186700 Prunus persica HOM05D001739 ORTHO05D004575 2.1e-54 217.6 548 33.4
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 3.6e-54 216.9 467 33.2
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 4.8e-54 216.5 457 35.0
FAN28G0236 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.4e-53 214.2 503 34.0
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 3.1e-53 213.8 469 34.3
TAR383G0739 Trochodendron aralioides HOM05D001739 ORTHO05D004575 6.9e-53 212.6 465 34.0
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 1.2e-52 211.8 471 33.8
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 1.5e-52 211.5 464 33.4
RcHm_v2.0_Chr2g0095061 Rosa chinensis HOM05D001739 ORTHO05D029616 2.6e-52 210.7 593 33.9
COL.COLO4_21223 Corchorus olitorius HOM05D001739 ORTHO05D004575 4.4e-52 209.9 484 34.5
MD02G1099100 Malus domestica HOM05D001739 ORTHO05D004575 1.7e-51 208.0 488 35.0
ClCG03G014800 Citrullus lanatus HOM05D001739 ORTHO05D004575 2.2e-51 207.6 469 34.3
RcHm_v2.0_Chr2g0094991 Rosa chinensis HOM05D001739 ORTHO05D029616 2.9e-51 207.2 594 34.0
RcHm_v2.0_Chr2g0095131 Rosa chinensis HOM05D001739 ORTHO05D015654 2.9e-51 207.2 533 34.5
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 2.9e-51 207.2 455 34.7
FAN26G0455 Fragaria x ananassa HOM05D001739 ORTHO05D004575 3.8e-51 206.8 459 34.9
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 3.8e-51 206.8 463 33.5
Haze_26051 Corylus avellana HOM05D001739 ORTHO05D004575 4.9e-51 206.5 450 34.4
CsaV3_1G041350 Cucumis sativus L. HOM05D001739 ORTHO05D004575 6.4e-51 206.1 471 33.5
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 6.4e-51 206.1 476 34.0
FAN26G3315 Fragaria x ananassa HOM05D001739 ORTHO05D025407 2.4e-50 204.1 531 33.9
CiPaw.03G202600 Carya illinoinensis HOM05D001739 ORTHO05D004575 5.4e-50 203.0 474 32.7
MELO3C015548.2 Cucumis melo HOM05D001739 ORTHO05D004575 5.4e-50 203.0 467 33.2
Cfa002954 Carpinus fangiana HOM05D001739 ORTHO05D004575 1.2e-49 201.8 474 33.1
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 2.7e-49 200.7 427 34.4
Duzib168G0208 Durio zibethinus HOM05D001739 ORTHO05D004575 7.9e-49 199.1 467 32.8
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 7.9e-49 199.1 468 32.9
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 1.0e-48 198.7 468 32.7
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 1.3e-48 198.4 470 31.5
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 5.1e-48 196.4 454 33.9
Thecc.09G071800 Theobroma cacao HOM05D001739 ORTHO05D004575 1.1e-47 195.3 484 33.3
Gorai.001G017100 Gossypium raimondii HOM05D001739 ORTHO05D004575 1.5e-47 194.9 457 33.0
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 1.5e-47 194.9 471 33.8
FAN10G4203 Fragaria x ananassa HOM05D001739 ORTHO05D029616 2.5e-47 194.1 519 32.4
Gohir.D07G016300 Gossypium hirsutum HOM05D001739 ORTHO05D004575 2.5e-47 194.1 457 32.8
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 2.5e-47 194.1 473 31.9
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 3.3e-47 193.7 457 32.4
Lalb_Chr13g0299281 Lupinus albus HOM05D001739 ORTHO05D004575 4.3e-47 193.4 475 32.6
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 1.3e-46 191.8 468 32.3
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 1.6e-46 191.4 458 32.1
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 2.1e-46 191.0 543 30.4
Ca_09790_v3 Cicer arietinum L. HOM05D001739 ORTHO05D004575 2.8e-46 190.7 473 32.6
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 4.8e-46 189.9 472 30.3
FvH4_1g08660 Fragaria vesca HOM05D001739 ORTHO05D025407 4.8e-46 189.9 530 32.6
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 6.2e-46 189.5 543 30.6
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 6.2e-46 189.5 467 31.7
FAN19G2992 Fragaria x ananassa HOM05D001739 ORTHO05D015654 8.1e-46 189.1 515 32.2
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 1.1e-45 188.7 464 31.5
TPR.G18558 Trifolium pratense HOM05D001739 ORTHO05D004575 1.4e-45 188.3 470 32.1
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 2.4e-45 187.6 475 31.8
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea HOM05D001739 ORTHO05D004575 3.1e-45 187.2 469 32.6
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 5.3e-45 186.4 469 32.2
Psat6g134600 Pisum sativum HOM05D001739 ORTHO05D004575 1.2e-44 185.3 489 32.3
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 2.6e-44 184.1 467 31.7
FvH4_1g08750 Fragaria vesca HOM05D001739 ORTHO05D015654 3.4e-44 183.7 494 33.0
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 3.4e-44 183.7 482 31.5
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 4.5e-44 183.3 468 31.8
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 5.8e-44 183.0 470 31.5
FAN19G1672 Fragaria x ananassa HOM05D001739 ORTHO05D015654 2.9e-43 180.6 514 32.1
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 4.9e-43 179.9 528 30.1
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 4.9e-43 179.9 492 31.7
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 8.4e-43 179.1 472 31.8
Cc06_g12580 Coffea canephora HOM05D001739 ORTHO05D004575 1.1e-42 178.7 474 31.0
FvH4_1g08670 Fragaria vesca HOM05D001739 ORTHO05D025407 1.9e-42 177.9 532 31.4
Psat7g002920 Pisum sativum HOM05D001739 ORTHO05D004575 1.6e-41 174.9 460 31.1
HanXRQChr04g0122371 Helianthus annuus HOM05D001739 ORTHO05D004575 3.5e-41 173.7 473 30.9
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 4.6e-41 173.3 465 30.8
FvH4_1g08730 Fragaria vesca HOM05D001739 ORTHO05D015654 4.6e-41 173.3 499 32.1
SHI02768 Sapria himalayana HOM05D001739 ORTHO05D004575 4.6e-41 173.3 459 32.2
TPR.G13945 Trifolium pratense HOM05D001739 ORTHO05D004575 7.9e-41 172.6 456 32.0
FAN04G1085 Fragaria x ananassa HOM05D001739 ORTHO05D201578 1.3e-40 171.8 162 64.2
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.8e-40 171.4 473 30.4
Solyc07g042380.4 Solanum lycopersicum HOM05D001739 ORTHO05D004575 2.3e-40 171.0 442 31.7
FvH4_1g08691 Fragaria vesca HOM05D001739 ORTHO05D015654 5.1e-40 169.9 508 31.9
FAN26G0106 Fragaria x ananassa HOM05D001739 ORTHO05D015654 2.5e-39 167.5 514 30.7
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 2.5e-39 167.5 481 30.1
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 3.3e-39 167.2 398 32.2
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 7.4e-39 166.0 471 30.1
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 6.2e-38 162.9 481 30.4
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 8.1e-38 162.5 472 29.2
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 1.1e-37 162.2 386 32.9
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 1.8e-37 161.4 499 29.3
Peaxi162Scf00191g01112 Petunia axillaris HOM05D001739 ORTHO05D004575 2.0e-36 157.9 444 30.6
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 5.8e-36 156.4 388 31.7
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 7.6e-36 156.0 472 28.6
THA.LOC104809049 Tarenaya hassleriana HOM05D001739 ORTHO05D004575 1.0e-35 155.6 469 28.4
Nitab4.5_0001565g0110 Nicotiana tabacum HOM05D001739 ORTHO05D004575 1.3e-35 155.2 524 28.8
FAN26G3321 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.2e-33 148.7 514 29.2
FAN23G1058 Fragaria x ananassa HOM05D001739 ORTHO05D025407 6.0e-33 146.4 343 37.3
AUR62028280 Chenopodium quinoa HOM05D001739 ORTHO05D004575 1.0e-32 145.6 475 28.4
FAN19G0960 Fragaria x ananassa HOM05D001739 ORTHO05D025407 3.9e-32 143.7 341 37.0
FAN26G3373 Fragaria x ananassa HOM05D001739 ORTHO05D015654 5.1e-32 143.3 507 30.6
BolC3t14614H Brassica oleracea HOM05D001739 ORTHO05D004575 2.8e-30 137.5 459 30.3
unitig_744.g24652 Utricularia gibba HOM05D001739 ORTHO05D004575 6.3e-30 136.3 473 27.1
FAN26G1945 Fragaria x ananassa HOM05D001739 ORTHO05D035581 1.1e-29 135.6 507 28.2
BcaC02g11500 Brassica carinata HOM05D001739 ORTHO05D004575 1.4e-29 135.2 461 29.1
Sp4g16630 Schrenkiella parvula HOM05D001739 ORTHO05D004575 1.4e-29 135.2 464 29.1
BraA03t11167Z Brassica rapa HOM05D001739 ORTHO05D004575 1.8e-29 134.8 459 30.1
BcaC01g05798 Brassica carinata HOM05D001739 ORTHO05D004575 2.4e-29 134.4 459 29.6
BcaC02g11606 Brassica carinata HOM05D001739 ORTHO05D004575 3.1e-29 134.0 447 30.0
C04p13350 Brassica napus HOM05D001739 ORTHO05D004575 3.1e-29 134.0 447 30.0
C03p22320 Brassica napus HOM05D001739 ORTHO05D004575 4.1e-29 133.7 459 29.6
A03p19100 Brassica napus HOM05D001739 ORTHO05D004575 1.5e-28 131.7 464 30.6
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 1.5e-28 131.7 339 30.4
BcaB01g03896 Brassica carinata HOM05D001739 ORTHO05D004575 2.0e-28 131.3 480 30.6
BraA05t20081Z Brassica rapa HOM05D001739 ORTHO05D004575 2.0e-28 131.3 461 29.3
C04p14660 Brassica napus HOM05D001739 ORTHO05D004575 2.6e-28 131.0 463 28.9
BolC4t23047H Brassica oleracea HOM05D001739 ORTHO05D004575 2.6e-28 131.0 463 28.9
AT2G34357 Arabidopsis thaliana HOM05D001739 ORTHO05D004575 4.5e-28 130.2 463 27.9
Thhalv10016153m.g Eutrema salsugineum HOM05D001739 ORTHO05D004575 5.9e-28 129.8 461 28.4
Aa31LG9G14080 Aethionema arabicum HOM05D001739 ORTHO05D004575 1.7e-27 128.3 462 29.0
A05p11320 Brassica napus HOM05D001739 ORTHO05D004575 6.5e-27 126.3 470 29.6
BcaB02g09558 Brassica carinata HOM05D001739 ORTHO05D004575 1.1e-26 125.6 463 28.1
AL4G30320 Arabidopsis lyrata HOM05D001739 ORTHO05D004575 3.2e-26 124.0 474 29.1
Carub.0004s1602 Capsella rubella HOM05D001739 ORTHO05D004575 7.2e-26 122.9 443 28.7
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 1.6e-25 121.7 444 26.4
CARHR128440 Cardamine hirsuta HOM05D001739 ORTHO05D004575 6.1e-25 119.8 467 29.3
SEGI_37036 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 2.5e-23 114.4 413 24.9
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 9.7e-23 112.5 361 26.9
CDE04G0230 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 9.0e-21 105.9 316 28.5
CAN.G333.15 Capsicum annuum HOM05D001739 ORTHO05D004575 6.5e-19 99.8 251 31.5
FAN26G3327 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.1e-18 99.0 445 26.7
FvH4_7g02570 Fragaria vesca HOM05D001739 ORTHO05D029616 7.2e-18 96.3 202 34.2
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 1.2e-17 95.5 450 23.6
Pp3c2_3190 Physcomitrium patens HOM05D001739 ORTHO05D004575 1.0e-16 92.4 480 22.9
MD02G1098900 Malus domestica HOM05D001739 ORTHO05D004575 2.0e-15 88.2 124 46.0
FAN19G1997 Fragaria x ananassa HOM05D001739 ORTHO05D015654 5.7e-15 86.7 199 32.2
AUR62025277 Chenopodium quinoa HOM05D001739 ORTHO05D004575 2.2e-14 84.7 201 30.8
SEGI_16086 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 8.2e-14 82.8 394 23.6
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 9.1e-13 79.3 524 22.3
Sc18g0003470 Simmondsia chinensis HOM05D001739 ORTHO05D004575 1.5e-12 78.6 121 38.0
CDE12G0742 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 7.7e-12 76.3 152 34.2
Rhsim13G0126900 Rhododendron simsii HOM05D001739 ORTHO05D004575 1.7e-11 75.1 118 38.1
Eucgr.C00777 Eucalyptus grandis HOM05D001739 ORTHO05D004575 8.5e-11 72.8 120 36.7
FAN23G2998 Fragaria x ananassa HOM05D001739 ORTHO05D198978 1.9e-10 71.6 213 29.6
AagrBONN_evm.TU.Sc2ySwM_117.3958 Anthoceros agrestis HOM05D001739 ORTHO05D004575 3.2e-10 70.9 393 22.1
Migut.J00896 Erythranthe guttata HOM05D001739 ORTHO05D004575 5.5e-10 70.1 173 29.5
FAN28G1182 Fragaria x ananassa HOM05D001739 ORTHO05D004575 9.4e-10 69.3 117 37.6
FvH4_1g21223 Fragaria vesca HOM05D001739 ORTHO05D198449 1.8e-08 65.1 98 49.0
TPR.G10174 Trifolium pratense HOM05D001739 ORTHO05D004575 1.5e-07 62.0 251 24.7
FvH4_6g18960 Fragaria vesca HOM05D001739 ORTHO05D035276 3.3e-07 60.8 159 34.0
FAN26G0957 Fragaria x ananassa HOM05D001739 ORTHO05D015654 1.7e-06 58.5 93 39.8


User provided reference genes

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