Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 5.6e-155 550.8 264 100.0
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.3e-155 550.4 264 99.6
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.4e-153 545.4 264 98.9
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.6e-152 542.0 264 98.1
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.6e-148 527.3 256 99.2
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 3.3e-139 498.4 264 88.3
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.4e-110 403.3 264 70.8
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.6e-109 399.8 262 70.6
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 6.1e-109 397.9 262 72.1
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.8e-108 396.4 262 71.0
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 2.6e-107 392.5 262 70.6
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 1.7e-106 389.8 262 68.3
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.7e-106 389.8 262 71.8
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 3.7e-106 388.7 262 70.2
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 5.3e-105 384.8 263 68.4
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 2.0e-104 382.9 262 68.3
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 2.6e-104 382.5 262 67.6
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 3.5e-104 382.1 262 68.3
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 1.3e-103 380.2 262 67.9
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 5.0e-103 378.3 304 61.2
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.1e-102 377.1 262 66.0
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.5e-102 376.7 264 68.2
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 1.9e-102 376.3 262 68.7
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 3.2e-102 375.6 259 69.9
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 3.2e-102 375.6 264 66.7
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 4.2e-102 375.2 256 68.0
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 5.5e-102 374.8 262 66.4
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 2.7e-101 372.5 264 68.2
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 2.7e-101 372.5 262 67.6
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 3.6e-101 372.1 253 71.9
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 3.6e-101 372.1 253 71.9
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 3.6e-101 372.1 256 68.4
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 4.7e-101 371.7 253 67.6
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 8.0e-101 370.9 262 66.0
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 3.0e-100 369.0 265 65.7
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.2e-100 368.2 262 65.6
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 8.8e-100 367.5 254 66.1
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 2.0e-99 366.3 264 65.2
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 2.6e-99 365.9 257 67.7
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 3.3e-99 365.5 264 65.9
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 5.7e-99 364.8 262 66.0
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 5.7e-99 364.8 264 64.4
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 9.7e-99 364.0 256 64.8
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.7e-98 363.2 262 67.2
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.1e-97 360.5 254 67.7
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.4e-97 360.1 252 67.1
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 5.3e-97 358.2 254 67.7
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 1.2e-96 357.1 261 64.8
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 2.0e-96 356.3 253 66.8
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 3.5e-96 355.5 252 65.1
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 4.5e-96 355.1 253 66.8
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 5.9e-96 354.8 254 66.1
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 7.7e-96 354.4 254 66.9
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 3.8e-95 352.1 256 63.7
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 6.5e-95 351.3 256 64.5
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 1.5e-94 350.1 254 65.7
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 4.2e-94 348.6 254 64.6
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 7.2e-94 347.8 263 63.5
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 3.0e-92 342.4 252 65.1
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.6e-91 339.3 261 65.1
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 3.4e-91 339.0 253 65.2
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 2.2e-90 336.3 222 71.2
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 2.2e-90 336.3 256 60.5
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 8.3e-90 334.3 264 59.5
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 1.9e-86 323.2 227 65.2
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.2e-85 320.5 219 70.8
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 4.9e-82 308.5 253 62.8
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 1.1e-81 307.4 262 58.4
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.6e-80 303.5 254 60.2
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 6.6e-79 298.1 252 58.3
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.5e-78 297.0 222 60.4
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 1.5e-75 287.0 179 76.5
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 4.1e-73 278.9 226 58.8
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 3.9e-71 272.3 229 56.3
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.4e-65 253.1 169 70.4
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.4e-65 253.1 169 70.4
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 4.6e-64 248.8 180 65.0
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.5e-56 222.6 118 89.8
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 5.8e-51 205.3 133 70.7
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.7e-50 203.8 131 70.2
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 2.2e-50 203.4 180 51.7
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 1.4e-49 200.7 292 41.4
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 2.7e-48 196.4 181 52.5
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 1.2e-45 187.6 201 48.3
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 3.6e-45 186.0 132 68.9
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 1.6e-40 170.6 162 50.6
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 1.8e-36 157.1 144 51.4
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 4.0e-36 156.0 101 72.3
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 7.1e-33 145.2 103 66.0
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 1.7e-31 140.6 312 30.4
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.1e-31 139.0 312 30.4
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 2.9e-26 123.2 104 59.6
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.5e-16 89.7 53 69.8
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.0e-15 88.2 89 47.2
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.8e-15 87.4 53 67.9
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 4.3e-14 82.8 75 53.3
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 3.1e-12 76.6 110 43.6


User provided reference genes

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