Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g05090 Fragaria vesca HOM05D007441 ORTHO05D009501 2.7e-95 352.1 186 100.0
FAN18G4363 Fragaria x ananassa HOM05D007441 ORTHO05D009501 1.3e-94 349.7 186 99.5
FAN13G3077 Fragaria x ananassa HOM05D007441 ORTHO05D009501 2.8e-92 342.0 186 96.2
FAN04G2715 Fragaria x ananassa HOM05D007441 ORTHO05D009501 4.0e-91 338.2 186 95.7
RcHm_v2.0_Chr7g0193911 Rosa chinensis HOM05D007441 ORTHO05D009501 2.9e-81 305.4 186 85.5
Prupe.5G176500 Prunus persica HOM05D007441 ORTHO05D009501 3.4e-74 282.0 186 77.4
MD14G1183800 Malus domestica HOM05D007441 ORTHO05D009501 5.9e-66 254.6 186 72.0
QL10p013655 Quercus lobata HOM05D007441 ORTHO05D009501 7.4e-61 237.7 178 70.8
GSVIVG01007790001 Vitis vinifera HOM05D007441 ORTHO05D009501 4.1e-59 231.9 179 66.5
Hma1.2p1_0176F.1_g077710 Hydrangea macrophylla HOM05D007441 ORTHO05D009501 1.5e-58 229.9 189 63.5
Lj4g0018861 Lotus japonicus HOM05D007441 ORTHO05D009501 3.2e-56 222.2 180 63.3
CiPaw.11G029400 Carya illinoinensis HOM05D007441 ORTHO05D009501 9.4e-56 220.7 176 66.5
Sabra12G0056200 Salix brachista HOM05D007441 ORTHO05D009501 1.6e-55 219.9 175 64.0
Ciclev10022460m.g Citrus clementina HOM05D007441 ORTHO05D009501 4.7e-55 218.4 178 65.7
Atru.chr9.2436 Acer truncatum HOM05D007441 ORTHO05D009501 6.1e-55 218.0 181 64.1
Glyma.17G091300 Glycine max HOM05D007441 ORTHO05D009501 1.8e-54 216.5 180 60.6
Duzib084G0400 Durio zibethinus HOM05D007441 ORTHO05D009501 2.3e-54 216.1 177 63.3
Dinv20676 Davidia involucrata HOM05D007441 ORTHO05D009501 3.0e-54 215.7 183 63.4
Manes.06G102900 Manihot esculenta HOM05D007441 ORTHO05D009501 3.0e-54 215.7 182 62.6
Potri.012G078400 Populus trichocarpa HOM05D007441 ORTHO05D009501 5.1e-54 214.9 178 61.8
TAR622G1175 Trochodendron aralioides HOM05D007441 ORTHO05D009501 8.8e-54 214.2 175 63.4
Actinidia19093 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.1e-53 213.8 149 72.5
TWI15G0162 Tripterygium wilfordii HOM05D007441 ORTHO05D009501 1.5e-53 213.4 183 61.2
VMungo1215G1307 Vigna mungo HOM05D007441 ORTHO05D009501 2.0e-53 213.0 182 58.8
Lsat_1_v5_gn_1_26521 Lactuca sativa HOM05D007441 ORTHO05D009501 4.4e-53 211.8 152 69.1
Sc04g0001930 Simmondsia chinensis HOM05D007441 ORTHO05D009501 5.7e-53 211.5 151 68.9
Duzib205G0170 Durio zibethinus HOM05D007441 ORTHO05D009501 2.8e-52 209.1 182 61.0
CSS0037538 Camellia sinensis var. sinensis HOM05D007441 ORTHO05D009501 3.7e-52 208.8 151 68.9
Phvul.003G198700 Phaseolus vulgaris HOM05D007441 ORTHO05D009501 8.2e-52 207.6 183 57.4
PGR044G0794 Punica granatum HOM05D007441 ORTHO05D009501 8.2e-52 207.6 181 60.8
arahy.Tifrunner.gnm1.ann1.DR4P4T Arachis hypogaea HOM05D007441 ORTHO05D009501 1.1e-51 207.2 179 58.7
ECA247G2439 Erigeron canadensis HOM05D007441 ORTHO05D009501 1.1e-51 207.2 148 69.6
arahy.Tifrunner.gnm1.ann1.01HJP6 Arachis hypogaea HOM05D007441 ORTHO05D009501 1.8e-51 206.5 179 58.1
Lalb_Chr07g0182651 Lupinus albus HOM05D007441 ORTHO05D009501 4.1e-51 205.3 151 70.2
Potri.015G073900 Populus trichocarpa HOM05D007441 ORTHO05D009501 7.0e-51 204.5 173 63.0
Lj9A451T94 Lonicera japonica HOM05D007441 ORTHO05D009501 1.5e-50 203.4 171 59.6
THA.LOC104809273 Tarenaya hassleriana HOM05D007441 ORTHO05D009501 2.6e-50 202.6 179 59.2
Thecc.03G008500 Theobroma cacao HOM05D007441 ORTHO05D009501 4.5e-50 201.8 181 59.1
Cpa.g.sc124.33 Carica papaya HOM05D007441 ORTHO05D009501 5.9e-50 201.4 178 61.8
Medtr4g106640 Medicago truncatula HOM05D007441 ORTHO05D009501 1.7e-49 199.9 180 60.0
Ca_21923_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 2.2e-49 199.5 144 68.8
Psat4g057000 Pisum sativum HOM05D007441 ORTHO05D009501 2.9e-49 199.1 178 61.2
Ca_21905_v3 Cicer arietinum L. HOM05D007441 ORTHO05D009501 8.5e-49 197.6 179 58.7
Sp1g23350 Schrenkiella parvula HOM05D007441 ORTHO05D009501 2.5e-48 196.1 178 58.4
AUR62008240 Chenopodium quinoa HOM05D007441 ORTHO05D009501 5.5e-48 194.9 171 60.8
BcaC05g26717 Brassica carinata HOM05D007441 ORTHO05D009501 1.6e-47 193.4 181 56.4
AL1G40490 Arabidopsis lyrata HOM05D007441 ORTHO05D009501 2.1e-47 193.0 180 55.6
CANSAT80G2614 Cannabis sativa HOM05D007441 ORTHO05D009501 6.1e-47 191.4 146 67.1
AUR62030992 Chenopodium quinoa HOM05D007441 ORTHO05D009501 8.0e-47 191.0 171 59.6
Haze_07488 Corylus avellana HOM05D007441 ORTHO05D009501 1.0e-46 190.7 175 60.6
AT1G24450 Arabidopsis thaliana HOM05D007441 ORTHO05D009501 2.3e-46 189.5 181 56.9
A09p38770 Brassica napus HOM05D007441 ORTHO05D009501 2.3e-46 189.5 181 55.2
BraA09t39385Z Brassica rapa HOM05D007441 ORTHO05D009501 2.3e-46 189.5 181 55.2
C05p25830 Brassica napus HOM05D007441 ORTHO05D009501 3.0e-46 189.1 181 55.2
Carub.0001s2566 Capsella rubella HOM05D007441 ORTHO05D009501 3.0e-46 189.1 182 55.5
HanXRQChr02g0037211 Helianthus annuus HOM05D007441 ORTHO05D009501 3.9e-46 188.7 145 64.1
TPR.G37479 Trifolium pratense HOM05D007441 ORTHO05D009501 5.2e-46 188.3 147 65.3
CARHR026680 Cardamine hirsuta HOM05D007441 ORTHO05D009501 6.7e-46 188.0 187 55.6
SGA_v2.0_scaffold90G27976 Striga asiatica HOM05D007441 ORTHO05D009501 6.7e-46 188.0 142 67.6
Thhalv10008862m.g Eutrema salsugineum HOM05D007441 ORTHO05D009501 8.8e-46 187.6 180 55.6
Hund02733 Selenicereus undatus HOM05D007441 ORTHO05D009501 8.8e-46 187.6 177 56.5
Nn4g22840 Nelumbo nucifera HOM05D007441 ORTHO05D009501 1.1e-45 187.2 177 58.2
BolC5t31303H Brassica oleracea HOM05D007441 ORTHO05D009501 1.5e-45 186.8 181 54.1
Aqoxy3G03040 Aquilegia oxysepala HOM05D007441 ORTHO05D009501 4.8e-44 181.8 140 63.6
Oeu016356.1 Olea europaea HOM05D007441 ORTHO05D009501 8.2e-44 181.0 144 61.8
SalBow5G3166 Salvia bowleyana HOM05D007441 ORTHO05D009501 8.2e-44 181.0 181 51.9
Aa31LG7G9580 Aethionema arabicum HOM05D007441 ORTHO05D009501 9.1e-43 177.6 181 53.0
Nitab4.5_0006831g0010 Nicotiana tabacum HOM05D007441 ORTHO05D009501 1.6e-42 176.8 168 58.3
Rhsim12G0163200 Rhododendron simsii HOM05D007441 ORTHO05D009501 1.6e-42 176.8 142 63.4
Solyc03g114120.3 Solanum lycopersicum HOM05D007441 ORTHO05D009501 2.0e-42 176.4 175 53.7
Sopen03g033180 Solanum pennellii HOM05D007441 ORTHO05D009501 2.0e-42 176.4 175 53.7
PGSC0003DMG400024487 Solanum tuberosum HOM05D007441 ORTHO05D009501 4.5e-42 175.3 175 53.1
PSO832G4588 Papaver somniferum HOM05D007441 ORTHO05D009501 1.1e-40 170.6 171 52.6
EL10Ac5g10787 Beta vulgaris HOM05D007441 ORTHO05D009501 4.2e-40 168.7 138 61.6
MSTRG.23109 Avicennia marina HOM05D007441 ORTHO05D009501 5.5e-40 168.3 189 50.8
BcaC05g26720 Brassica carinata HOM05D007441 ORTHO05D009501 2.7e-39 166.0 181 51.4
Nitab4.5_0010542g0040 Nicotiana tabacum HOM05D007441 ORTHO05D001268 2.7e-39 166.0 160 56.9
DCAR_031307 Daucus carota HOM05D007441 ORTHO05D009501 8.0e-39 164.5 117 68.4
AUR62029952 Chenopodium quinoa HOM05D007441 ORTHO05D009501 1.3e-36 157.1 124 62.1
CAN.G4872.1 Capsicum annuum HOM05D007441 ORTHO05D009501 8.3e-36 154.5 166 52.4
BcaC05g26525 Brassica carinata HOM05D007441 ORTHO05D009501 5.3e-35 151.8 122 58.2
CAN.G781.35 Capsicum annuum HOM05D007441 ORTHO05D009501 2.7e-34 149.4 126 60.3
ATR1149G031 Amborella trichopoda HOM05D007441 ORTHO05D009501 2.9e-33 146.0 153 51.0
MBI15_g31106_MAGBIO Magnolia biondii HOM05D007441 ORTHO05D009501 7.2e-32 141.4 119 59.7
Peaxi162Scf00017g00269 Petunia axillaris HOM05D007441 ORTHO05D009501 1.0e-30 137.5 114 60.5
BcaC06g35265 Brassica carinata HOM05D007441 ORTHO05D009501 2.3e-30 136.3 110 60.9
C07p18070 Brassica napus HOM05D007441 ORTHO05D009501 1.2e-29 134.0 110 60.0
Dinv09163 Davidia involucrata HOM05D007441 ORTHO05D009501 4.8e-28 128.6 130 56.9
Actinidia34944 Actinidia chinensis HOM05D007441 ORTHO05D009501 1.4e-27 127.1 88 69.3
AUR62039786 Chenopodium quinoa HOM05D007441 ORTHO05D009501 4.1e-27 125.6 119 58.0
Zm00001eb210540 Zea mays HOM05D007441 ORTHO05D009501 3.8e-25 119.0 140 42.1
BolC7t42316H Brassica oleracea HOM05D007441 ORTHO05D009501 3.6e-23 112.5 105 52.4
Medtr4g079220 Medicago truncatula HOM05D007441 ORTHO05D009501 1.8e-19 100.1 105 54.3
COL.COLO4_16923 Corchorus olitorius HOM05D007441 ORTHO05D009501 7.8e-18 94.7 100 48.0
CAN.G781.34 Capsicum annuum HOM05D007441 ORTHO05D009501 1.3e-17 94.0 75 62.7
Migut.I00040 Erythranthe guttata HOM05D007441 ORTHO05D009501 2.8e-15 86.3 61 67.2
Os03g0854400 Oryza sativa ssp. japonica HOM05D007441 ORTHO05D009501 8.0e-15 84.7 170 33.5
SMO118G0028 Selaginella moellendorffii HOM05D007441 ORTHO05D009501 1.8e-14 83.6 123 39.0
SEGI_24388 Sequoiadendron giganteum HOM05D007441 ORTHO05D009501 8.9e-14 81.3 109 41.3
HPP92_004711 Vanilla planifolia HOM05D007441 ORTHO05D009501 1.9e-11 73.6 91 45.1
AUR62040474 Chenopodium quinoa HOM05D007441 ORTHO05D009501 3.2e-11 72.8 60 63.3


User provided reference genes

Program Settings