Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 3.9e-41 171.0 86 100.0
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.9e-41 171.0 86 100.0
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.9e-41 171.0 86 100.0
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.9e-41 171.0 86 100.0
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 8.8e-41 169.9 86 98.8
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 8.8e-41 169.9 86 98.8
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 6.5e-36 153.7 85 88.2
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 2.5e-35 151.8 84 88.1
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 2.7e-34 148.3 82 89.0
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 1.0e-33 146.4 82 87.8
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 2.3e-33 145.2 82 86.6
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 6.7e-33 143.7 84 83.3
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 6.7e-33 143.7 84 83.3
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 8.8e-33 143.3 84 82.1
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 2.0e-32 142.1 80 87.5
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 7.4e-32 140.2 83 81.9
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 9.7e-32 139.8 80 85.0
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 9.7e-32 139.8 83 84.3
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 1.3e-31 139.4 84 81.0
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.7e-31 139.0 80 86.2
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 3.7e-31 137.9 83 81.9
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.7e-31 137.9 83 83.1
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 3.7e-31 137.9 83 83.1
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 3.7e-31 137.9 83 83.1
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 6.3e-31 137.1 81 81.5
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 8.2e-31 136.7 86 77.9
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 8.2e-31 136.7 81 81.5
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 8.2e-31 136.7 81 81.5
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 8.2e-31 136.7 81 81.5
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 8.2e-31 136.7 80 85.0
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 8.2e-31 136.7 81 84.0
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 1.1e-30 136.3 83 80.7
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 1.1e-30 136.3 81 80.2
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 1.8e-30 135.6 83 79.5
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 1.8e-30 135.6 86 76.7
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 1.8e-30 135.6 81 80.2
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 3.1e-30 134.8 81 80.2
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 3.1e-30 134.8 81 80.2
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 3.1e-30 134.8 81 80.2
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 3.1e-30 134.8 81 80.2
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 3.1e-30 134.8 81 80.2
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 3.1e-30 134.8 80 81.2
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 3.1e-30 134.8 81 82.7
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 4.1e-30 134.4 79 86.1
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 5.3e-30 134.0 81 79.0
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 5.3e-30 134.0 83 79.5
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 1.2e-29 132.9 83 78.3
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 1.2e-29 132.9 78 80.8
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 2.6e-29 131.7 76 84.2
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 2.6e-29 131.7 77 85.7
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 3.5e-29 131.3 79 81.0
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 3.5e-29 131.3 83 75.9
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 5.9e-29 130.6 76 84.2
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 7.7e-29 130.2 83 75.9
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 7.7e-29 130.2 80 80.0
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 7.7e-29 130.2 76 84.2
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.7e-28 129.0 79 82.3
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 2.9e-28 128.3 77 81.8
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 2.9e-28 128.3 71 87.3
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 2.9e-28 128.3 80 76.2
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 3.8e-28 127.9 76 84.2
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 6.5e-28 127.1 80 83.8
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 6.5e-28 127.1 84 76.2
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 6.5e-28 127.1 71 85.9
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 8.5e-28 126.7 79 81.0
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 8.5e-28 126.7 77 77.9
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.5e-27 125.9 92 69.6
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 1.5e-27 125.9 79 81.0
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.9e-27 125.6 79 79.7
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 1.9e-27 125.6 77 81.8
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 2.5e-27 125.2 76 81.6
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 3.2e-27 124.8 84 76.2
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 5.5e-27 124.0 69 91.3
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 2.1e-26 122.1 76 81.6
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 2.7e-26 121.7 76 78.9
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 6.1e-26 120.6 76 80.3
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 8.0e-26 120.2 76 78.9
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 8.0e-26 120.2 76 78.9
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.0e-25 119.8 68 85.3
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.4e-25 119.4 76 76.3
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.2e-24 116.3 77 71.4
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 2.6e-24 115.2 69 81.2
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 4.4e-24 114.4 58 98.3
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 4.4e-24 114.4 69 82.6
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 5.7e-24 114.0 69 79.7
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 5.7e-24 114.0 83 69.9
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 5.7e-24 114.0 102 62.7
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 9.7e-24 113.2 77 70.1
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 1.7e-23 112.5 64 87.5
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 2.2e-23 112.1 77 67.5
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.8e-23 111.7 71 76.1
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 3.7e-23 111.3 68 83.8
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 3.7e-23 111.3 77 67.5
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 4.8e-23 110.9 71 77.5
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.4e-22 109.4 67 82.1
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.8e-22 109.0 77 66.2
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 1.8e-22 109.0 99 60.6
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 1.2e-21 106.3 152 42.8
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 1.2e-21 106.3 64 81.2
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 2.0e-21 105.5 68 76.5
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 2.7e-21 105.1 55 90.9
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 4.5e-21 104.4 67 77.6
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.0e-20 103.2 68 75.0
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.0e-20 103.2 79 65.8
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 2.9e-20 101.7 65 72.3
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 2.5e-19 98.6 63 81.0
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 9.4e-19 96.7 122 45.9
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 2.1e-18 95.5 154 41.6
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 2.1e-18 95.5 69 68.1
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.8e-17 92.4 52 88.5
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 2.3e-17 92.0 52 86.5
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.5e-16 89.4 78 61.5
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.4e-14 82.8 69 62.3
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 3.1e-14 81.6 65 64.6
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 5.4e-14 80.9 70 61.4
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 9.1e-14 80.1 59 69.5
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.6e-13 79.3 71 56.3
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.9e-12 75.1 66 53.0
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 3.8e-12 74.7 67 58.2
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 6.6e-12 73.9 62 66.1
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.4e-09 66.2 35 94.3
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 1.8e-09 65.9 39 84.6
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 5.2e-09 64.3 57 59.6
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 1.4e-06 56.2 34 82.4


User provided reference genes

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