Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 3.8e-70 268.1 139 100.0
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 3.8e-70 268.1 139 100.0
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.2e-69 264.6 139 98.6
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.5e-66 256.1 139 95.7
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.4e-66 254.6 140 95.7
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.4e-66 254.6 140 95.7
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.7e-60 234.6 123 97.6
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 1.2e-28 130.2 153 53.6
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 3.4e-18 95.5 143 44.1
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 7.6e-18 94.4 151 42.4
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 9.9e-18 94.0 146 43.2
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 9.9e-18 94.0 121 49.6
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 2.9e-17 92.4 140 43.6
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 6.4e-17 91.3 147 42.2
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.1e-16 90.5 145 43.4
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 1.1e-16 90.5 145 43.4
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 1.4e-16 90.1 131 45.0
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 3.2e-16 89.0 148 41.9
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 5.4e-16 88.2 161 41.0
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 5.4e-16 88.2 148 39.9
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 7.1e-16 87.8 142 43.7
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 9.3e-16 87.4 140 42.9
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.1e-15 86.3 145 40.7
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.7e-15 85.9 147 42.9
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.7e-15 85.9 147 42.9
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 4.6e-15 85.1 167 38.9
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 4.6e-15 85.1 122 47.5
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 6.0e-15 84.7 132 39.4
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 6.0e-15 84.7 142 40.1
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.8e-15 84.3 154 40.3
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 7.8e-15 84.3 129 47.3
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 7.8e-15 84.3 130 43.1
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 1.7e-14 83.2 116 44.0
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 3.0e-14 82.4 153 41.2
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 5.1e-14 81.6 122 39.3
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 5.1e-14 81.6 128 46.1
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 5.1e-14 81.6 140 40.7
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 6.6e-14 81.3 124 48.4
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 8.7e-14 80.9 156 42.3
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 8.7e-14 80.9 147 41.5
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.1e-13 80.5 144 44.4
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 1.9e-13 79.7 130 41.5
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 2.5e-13 79.3 103 48.5
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 4.3e-13 78.6 148 38.5
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 5.6e-13 78.2 104 49.0
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 5.6e-13 78.2 131 47.3
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.3e-12 77.0 158 43.0
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 1.3e-12 77.0 133 44.4
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 2.8e-12 75.9 132 37.9
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 3.6e-12 75.5 125 43.2
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.6e-12 75.5 148 37.8
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 6.2e-12 74.7 66 63.6
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 6.2e-12 74.7 125 40.0
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 8.1e-12 74.3 113 45.1
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 8.1e-12 74.3 146 40.4
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 1.1e-11 73.9 146 40.4
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 1.8e-11 73.2 126 38.9
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 1.8e-11 73.2 113 43.4
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.4e-11 72.8 146 38.4
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 5.3e-11 71.6 146 39.7
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.9e-11 71.2 123 39.8
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 1.2e-10 70.5 108 44.4
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 1.5e-10 70.1 127 41.7
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 2.0e-10 69.7 134 38.8
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.0e-10 69.7 66 54.5
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 2.0e-10 69.7 66 54.5
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 2.6e-10 69.3 143 37.1
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 2.6e-10 69.3 130 37.7
MSTRG.25674 Avicennia marina HOM05D007727 ORTHO05D009078 2.2e-09 66.2 110 41.8
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 2.9e-09 65.9 108 42.6
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 3.8e-09 65.5 161 38.5
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 4.9e-09 65.1 138 37.7
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 6.4e-09 64.7 135 34.8
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.4e-09 64.7 139 37.4
TAR374G1217 Trochodendron aralioides HOM05D026466 ORTHO05D009078 8.4e-09 64.3 157 35.0
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 1.4e-08 63.5 137 35.0
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 1.9e-08 63.2 135 34.1
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 3.2e-08 62.4 133 32.3
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 5.4e-08 61.6 131 34.4
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 7.1e-08 61.2 126 32.5
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 1.2e-07 60.5 42 66.7
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 2.7e-07 59.3 80 43.8
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 3.5e-07 58.9 81 44.4
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 3.5e-07 58.9 66 53.0
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 1.0e-06 57.4 133 34.6
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 1.7e-06 56.6 49 53.1
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 2.3e-06 56.2 131 32.1
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 3.0e-06 55.8 133 35.3
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 3.0e-06 55.8 96 38.5
Peaxi162Scf00074g00091 Petunia axillaris HOM05D011491 ORTHO05D009078 3.0e-06 55.8 119 39.5
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.0e-06 55.8 66 43.9
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 3.9e-06 55.5 66 45.5
A01p15180 Brassica napus HOM05D009622 ORTHO05D011757 8.7e-06 54.3 105 35.2
BraA01t01456Z Brassica rapa HOM05D009622 ORTHO05D011757 8.7e-06 54.3 105 35.2


User provided reference genes

Program Settings