Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 1.2e-77 293.1 145 100.0
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.5e-64 249.6 121 98.3
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.5e-64 249.6 121 98.3
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 6.2e-63 244.2 121 95.9
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 8.1e-63 243.8 121 95.9
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.4e-61 238.4 121 94.2
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 6.2e-55 217.6 122 85.2
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 5.8e-45 184.5 122 76.2
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 1.3e-41 173.3 125 72.8
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 1.7e-41 172.9 124 71.0
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 9.3e-35 150.6 120 64.2
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 9.3e-35 150.6 122 63.1
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 1.2e-34 150.2 106 72.6
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 1.6e-34 149.8 122 61.5
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 2.7e-34 149.1 108 67.6
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 3.0e-33 145.6 122 63.1
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 1.9e-32 142.9 111 65.8
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 5.6e-32 141.4 123 63.4
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 9.6e-32 140.6 124 59.7
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.3e-31 140.2 126 62.7
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 2.8e-31 139.0 127 62.2
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 3.7e-31 138.7 120 65.0
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 6.2e-31 137.9 109 67.0
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 8.1e-31 137.5 114 65.8
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 1.8e-30 136.3 124 60.5
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 2.4e-30 136.0 118 64.4
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 2.4e-30 136.0 124 60.5
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 3.1e-30 135.6 130 57.7
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 3.1e-30 135.6 112 67.0
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 4.0e-30 135.2 121 64.5
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 6.9e-30 134.4 96 71.9
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 9.0e-30 134.0 124 59.7
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 2.6e-29 132.5 120 62.5
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 3.4e-29 132.1 98 69.4
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 9.9e-29 130.6 113 65.5
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.3e-28 130.2 127 59.1
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 1.7e-28 129.8 98 68.4
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 1.7e-28 129.8 122 61.5
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 3.8e-28 128.6 120 59.2
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 3.8e-28 128.6 99 68.7
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 3.8e-28 128.6 129 58.9
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 3.8e-28 128.6 110 64.5
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 4.9e-28 128.3 121 62.0
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 4.9e-28 128.3 108 64.8
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 6.4e-28 127.9 117 59.8
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 6.4e-28 127.9 109 67.9
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 1.1e-27 127.1 117 60.7
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.9e-27 126.3 120 61.7
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 2.4e-27 125.9 123 60.2
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 2.4e-27 125.9 87 74.7
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 3.2e-27 125.6 125 60.0
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 3.2e-27 125.6 126 58.7
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 5.5e-27 124.8 112 62.5
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 5.5e-27 124.8 123 58.5
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 5.5e-27 124.8 85 76.5
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 5.5e-27 124.8 67 85.1
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 7.1e-27 124.4 82 75.6
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 1.2e-26 123.6 119 60.5
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 1.2e-26 123.6 128 55.5
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 1.6e-26 123.2 119 60.5
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 1.6e-26 123.2 124 57.3
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 4.6e-26 121.7 87 74.7
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 6.0e-26 121.3 71 85.9
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 6.0e-26 121.3 96 69.8
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 7.9e-26 120.9 130 54.6
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.0e-25 120.6 129 57.4
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 1.0e-25 120.6 85 74.1
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 1.3e-25 120.2 119 59.7
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.3e-25 120.2 68 86.8
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 1.8e-25 119.8 71 84.5
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 1.8e-25 119.8 120 59.2
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 1.8e-25 119.8 85 72.9
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 1.8e-25 119.8 85 72.9
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 3.9e-25 118.6 97 67.0
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 5.1e-25 118.2 107 60.7
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 5.1e-25 118.2 121 57.0
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 6.7e-25 117.9 85 71.8
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 6.7e-25 117.9 70 81.4
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 6.7e-25 117.9 70 81.4
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 1.1e-24 117.1 113 61.9
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 1.1e-24 117.1 110 59.1
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 1.1e-24 117.1 79 74.7
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 1.5e-24 116.7 102 66.7
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 1.9e-24 116.3 114 60.5
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 3.3e-24 115.5 103 64.1
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 4.3e-24 115.2 71 80.3
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 5.6e-24 114.8 90 65.6
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 5.6e-24 114.8 66 84.8
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 7.4e-24 114.4 67 80.6
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 7.4e-24 114.4 71 74.6
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 9.6e-24 114.0 73 75.3
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 9.6e-24 114.0 66 84.8
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 9.6e-24 114.0 130 56.2
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 1.6e-23 113.2 111 60.4
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 2.1e-23 112.8 112 58.9
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 2.8e-23 112.5 59 89.8
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 2.8e-23 112.5 59 89.8
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 3.7e-23 112.1 61 91.8
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 4.8e-23 111.7 120 51.7
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 6.2e-23 111.3 61 85.2
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 8.2e-23 110.9 105 58.1
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 8.2e-23 110.9 68 82.4
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 1.1e-22 110.5 67 74.6
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 1.4e-22 110.2 65 80.0
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 1.8e-22 109.8 111 58.6
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 5.3e-22 108.2 69 79.7
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 1.2e-21 107.1 65 78.5
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 1.2e-21 107.1 62 82.3
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 1.5e-21 106.7 75 70.7
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 3.4e-21 105.5 64 78.1
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 1.3e-20 103.6 128 50.0
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 3.8e-20 102.1 56 85.7
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 3.8e-20 102.1 56 85.7
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 1.9e-19 99.8 120 51.7
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 9.3e-19 97.4 121 47.1
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 2.7e-18 95.9 79 65.8
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 3.5e-18 95.5 56 83.9
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 4.3e-16 88.6 59 72.9
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 8.2e-15 84.3 60 70.0
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 1.1e-14 84.0 115 46.1
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 2.0e-08 63.2 52 69.2


User provided reference genes

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