Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g02160 Fragaria vesca HOM05D007465 ORTHO05D016290 4.9e-67 257.7 131 100.0
FAN28G1645 Fragaria x ananassa HOM05D007465 ORTHO05D013077 2.4e-42 175.6 136 74.3
FAN02G2068 Fragaria x ananassa HOM05D007465 ORTHO05D016290 1.4e-37 159.8 124 75.0
FAN27G1426 Fragaria x ananassa HOM05D007465 ORTHO05D016290 5.8e-36 154.5 123 72.4
FAN19G1060 Fragaria x ananassa HOM05D007465 ORTHO05D016290 1.4e-34 149.8 132 67.4
FvH4_1g29320 Fragaria vesca HOM05D007465 ORTHO05D016290 4.6e-33 144.8 134 65.7
FvH4_1g29680 Fragaria vesca HOM05D007465 ORTHO05D016290 7.9e-33 144.1 137 65.7
FAN12G1882 Fragaria x ananassa HOM05D007465 ORTHO05D208177 2.3e-32 142.5 134 65.7
FvH4_4g22960 Fragaria vesca HOM05D007465 ORTHO05D016290 1.5e-31 139.8 134 63.4
FvH4_4g05090 Fragaria vesca HOM05D007465 ORTHO05D016290 9.6e-31 137.1 124 67.7
FvH4_2g19710 Fragaria vesca HOM05D007465 ORTHO05D016290 6.9e-29 131.0 120 66.7
FAN13G1042 Fragaria x ananassa HOM05D007465 ORTHO05D200728 9.9e-28 127.1 137 58.4
FAN27G0888 Fragaria x ananassa HOM05D007465 ORTHO05D210493 1.4e-26 123.2 121 64.5
FvH4_5g31570 Fragaria vesca HOM05D007465 ORTHO05D035480 9.3e-26 120.6 71 90.1
FAN18G1266 Fragaria x ananassa HOM05D007465 ORTHO05D035480 9.3e-26 120.6 71 90.1
FAN27G2906 Fragaria x ananassa HOM05D007465 ORTHO05D207223 9.3e-26 120.6 118 64.4
FvH4_6g36400 Fragaria vesca HOM05D007465 ORTHO05D016290 2.7e-25 119.0 123 64.2
FAN12G1189 Fragaria x ananassa HOM05D007465 ORTHO05D022569 3.5e-25 118.6 133 59.4
FAN14G2452 Fragaria x ananassa HOM05D007465 ORTHO05D025445 3.5e-25 118.6 81 82.7
FAN17G0485 Fragaria x ananassa HOM05D007465 ORTHO05D013077 7.9e-25 117.5 71 88.7
FAN12G1073 Fragaria x ananassa HOM05D007465 ORTHO05D016290 3.9e-24 115.2 122 59.8
FAN12G2840 Fragaria x ananassa HOM05D007465 ORTHO05D022569 8.7e-24 114.0 134 58.2
FvH4_6g21110 Fragaria vesca HOM05D007465 ORTHO05D022569 1.1e-23 113.6 133 57.9
FAN15G1677 Fragaria x ananassa HOM05D007465 ORTHO05D013077 1.5e-23 113.2 71 85.9
FvH4_3g32670 Fragaria vesca HOM05D007465 ORTHO05D013077 2.5e-23 112.5 71 84.5
FAN06G4493 Fragaria x ananassa HOM05D007465 ORTHO05D035412 3.3e-23 112.1 71 85.9
FAN06G3205 Fragaria x ananassa HOM05D007465 ORTHO05D205197 5.6e-23 111.3 105 68.6
FvH4_6g23190 Fragaria vesca HOM05D007465 ORTHO05D025445 7.4e-23 110.9 81 80.2
FAN06G1937 Fragaria x ananassa HOM05D007465 ORTHO05D022584 9.6e-23 110.5 71 84.5
FvH4_7g22190 Fragaria vesca HOM05D007465 ORTHO05D022584 2.8e-22 109.0 71 84.5
FAN16G1073 Fragaria x ananassa HOM05D007465 ORTHO05D013077 3.7e-22 108.6 71 84.5
FAN06G3429 Fragaria x ananassa HOM05D007465 ORTHO05D035412 8.1e-22 107.5 71 81.7
FAN10G3872 Fragaria x ananassa HOM05D007465 ORTHO05D013077 1.4e-21 106.7 72 80.6
FvH4_1g17360 Fragaria vesca HOM05D007465 ORTHO05D013077 2.4e-21 105.9 71 83.1
FAN13G0419 Fragaria x ananassa HOM05D007465 ORTHO05D025445 2.4e-21 105.9 81 76.5
FAN21G3984 Fragaria x ananassa HOM05D007465 ORTHO05D013077 3.1e-21 105.5 69 81.2
FvH4_2g12550 Fragaria vesca HOM05D007465 ORTHO05D022584 4.0e-21 105.1 71 81.7
FAN24G2913 Fragaria x ananassa HOM05D007465 ORTHO05D208174 4.0e-21 105.1 90 74.4
FvH4_2g08330 Fragaria vesca HOM05D007465 ORTHO05D025445 5.3e-21 104.8 72 81.9
FAN14G3733 Fragaria x ananassa HOM05D007465 ORTHO05D035480 5.3e-21 104.8 82 76.8
FvH4_7g12890 Fragaria vesca HOM05D007465 ORTHO05D035412 6.9e-21 104.4 68 83.8
FAN10G2860 Fragaria x ananassa HOM05D007465 ORTHO05D022584 6.9e-21 104.4 71 81.7
FvH4_5g27031 Fragaria vesca HOM05D007465 ORTHO05D001747 1.2e-20 103.6 71 81.7
FAN04G2115 Fragaria x ananassa HOM05D007465 ORTHO05D013077 1.5e-20 103.2 71 78.9
FAN26G0692 Fragaria x ananassa HOM05D007465 ORTHO05D022584 1.5e-20 103.2 71 80.3
FvH4_6g27230 Fragaria vesca HOM05D007465 ORTHO05D012103 2.0e-20 102.8 79 79.7
FvH4_1g19440 Fragaria vesca HOM05D007465 ORTHO05D001747 2.6e-20 102.4 70 81.4
FAN24G1768 Fragaria x ananassa HOM05D007465 ORTHO05D025445 2.6e-20 102.4 81 74.1
FvH4_7g00450 Fragaria vesca HOM05D007465 ORTHO05D010214 3.4e-20 102.1 71 81.7
FAN19G0798 Fragaria x ananassa HOM05D007465 ORTHO05D013077 3.4e-20 102.1 69 82.6
FvH4_1g27930 Fragaria vesca HOM05D007465 ORTHO05D022584 4.5e-20 101.7 71 78.9
FAN12G3201 Fragaria x ananassa HOM05D007465 ORTHO05D022569 4.5e-20 101.7 132 54.5
FAN06G1209 Fragaria x ananassa HOM05D007465 ORTHO05D012103 7.6e-20 100.9 78 76.9
FAN24G2792 Fragaria x ananassa HOM05D007465 ORTHO05D208847 7.6e-20 100.9 90 72.2
FvH4_6g30410 Fragaria vesca HOM05D007465 ORTHO05D017007 1.0e-19 100.5 68 82.4
FvH4_4g14650 Fragaria vesca HOM05D007465 ORTHO05D198272 3.8e-19 98.6 68 80.9
FAN11G0583 Fragaria x ananassa HOM05D007465 ORTHO05D208139 4.9e-19 98.2 71 78.9
FAN12G3963 Fragaria x ananassa HOM05D007465 ORTHO05D017007 4.9e-19 98.2 68 80.9
FAN19G0014 Fragaria x ananassa HOM05D007465 ORTHO05D017007 4.9e-19 98.2 68 80.9
FAN24G3423 Fragaria x ananassa HOM05D007465 ORTHO05D207062 4.9e-19 98.2 68 80.9
FvH4_2g15300 Fragaria vesca HOM05D007465 ORTHO05D017007 8.4e-19 97.4 66 81.8
FvH4_3g45600 Fragaria vesca HOM05D007465 ORTHO05D017007 8.4e-19 97.4 91 69.2
FAN14G4552 Fragaria x ananassa HOM05D007465 ORTHO05D017007 2.5e-18 95.9 68 79.4
FAN24G0591 Fragaria x ananassa HOM05D007465 ORTHO05D206333 4.2e-18 95.1 90 70.0
FAN19G2946 Fragaria x ananassa HOM05D007465 ORTHO05D017007 5.5e-18 94.7 68 77.9
FAN12G2102 Fragaria x ananassa HOM05D007465 ORTHO05D017007 7.1e-18 94.4 68 77.9
FAN12G4099 Fragaria x ananassa HOM05D007465 ORTHO05D017007 1.6e-17 93.2 68 76.5
FvH4_3g24710 Fragaria vesca HOM05D007465 ORTHO05D046467 3.5e-17 92.0 66 78.8
FAN11G1886 Fragaria x ananassa HOM05D007465 ORTHO05D046467 3.5e-17 92.0 66 78.8
FvH4_3g17700 Fragaria vesca HOM05D007465 ORTHO05D001747 2.3e-16 89.4 69 78.3
FAN27G2288 Fragaria x ananassa HOM05D001753 ORTHO05D001718 2.3e-16 89.4 92 62.0
FvH4_3g26470 Fragaria vesca HOM05D007465 ORTHO05D022569 3.0e-16 89.0 83 66.3
FvH4_2g06820 Fragaria vesca HOM05D007465 ORTHO05D017007 5.1e-16 88.2 68 75.0
FAN20G3082 Fragaria x ananassa HOM05D007465 ORTHO05D011728 1.9e-15 86.3 90 62.2
FAN11G1090 Fragaria x ananassa HOM05D007465 ORTHO05D045889 3.3e-15 85.5 66 75.8
FAN27G2692 Fragaria x ananassa HOM05D007465 ORTHO05D210902 3.3e-15 85.5 136 48.5
FvH4_3g25330 Fragaria vesca HOM05D007465 ORTHO05D045889 4.3e-15 85.1 66 75.8
FvH4_2g07513 Fragaria vesca HOM05D007465 ORTHO05D013077 2.1e-14 82.8 57 80.7
FAN01G1047 Fragaria x ananassa HOM05D007465 ORTHO05D013077 2.8e-14 82.4 53 84.9
FAN20G1216 Fragaria x ananassa HOM05D007465 ORTHO05D013077 3.7e-14 82.0 53 84.9
FvH4_1g29820 Fragaria vesca HOM05D007465 ORTHO05D022569 2.6e-12 75.9 129 52.7
FAN03G0378 Fragaria x ananassa HOM05D007465 ORTHO05D013077 1.3e-11 73.6 52 76.9
FvH4_2g16381 Fragaria vesca HOM05D001808 ORTHO05D001747 6.5e-11 71.2 49 81.6
FAN24G0071 Fragaria x ananassa HOM05D000807 ORTHO05D000662 6.5e-11 71.2 49 81.6
FAN24G2736 Fragaria x ananassa HOM05D000807 ORTHO05D000662 6.5e-11 71.2 49 81.6
FAN27G0176 Fragaria x ananassa HOM05D000807 ORTHO05D000662 8.4e-11 70.9 74 66.2
FAN26G1952 Fragaria x ananassa HOM05D007465 ORTHO05D209543 1.9e-10 69.7 69 65.2
RcHm_v2.0_Chr6g0280231 Rosa chinensis HOM05D001808 ORTHO05D013077 2.5e-10 69.3 48 77.1
RcHm_v2.0_Chr6g0280171 Rosa chinensis HOM05D001808 ORTHO05D001747 1.2e-09 67.0 48 75.0
FAN13G1640 Fragaria x ananassa HOM05D007465 ORTHO05D207717 1.6e-09 66.6 67 64.2
FAN09G0692 Fragaria x ananassa HOM05D007465 ORTHO05D013077 7.9e-09 64.3 79 59.5
FAN07G0380 Fragaria x ananassa HOM05D009280 ORTHO05D013077 3.9e-08 62.0 41 82.9
FAN01G0131 Fragaria x ananassa HOM05D007465 ORTHO05D206813 5.1e-08 61.6 58 63.8
FAN12G2085 Fragaria x ananassa HOM05D007465 ORTHO05D013077 5.1e-08 61.6 57 66.7
FAN02G1463 Fragaria x ananassa HOM05D007465 ORTHO05D209001 6.7e-08 61.2 55 63.6
FAN08G1804 Fragaria x ananassa HOM05D020434 ORTHO05D002619 8.7e-08 60.8 61 60.7
FAN04G2175 Fragaria x ananassa HOM05D007465 ORTHO05D200025 5.7e-07 58.2 73 58.9
Prupe.8G176700 Prunus persica HOM05D001808 ORTHO05D001747 6.3e-06 54.7 46 60.9


User provided reference genes

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