Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g01660 Fragaria vesca HOM05D000003 ORTHO05D006737 3.1e-44 181.4 92 100.0
FAN14G5848 Fragaria x ananassa HOM05D000003 ORTHO05D006737 9.1e-36 153.3 118 71.2
FvH4_3g25361 Fragaria vesca HOM05D000003 ORTHO05D006737 4.7e-32 141.0 118 67.8
FAN20G2266 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.3e-29 130.6 117 64.1
RcHm_v2.0_Chr5g0040041 Rosa chinensis HOM05D000003 ORTHO05D006737 7.0e-28 127.1 117 60.7
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 1.6e-27 125.9 117 59.0
FAN12G3592 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.5e-26 120.6 98 68.4
RcHm_v2.0_Chr4g0397511 Rosa chinensis HOM05D000003 ORTHO05D006737 6.5e-26 120.6 118 55.9
FAN12G2468 Fragaria x ananassa HOM05D000003 ORTHO05D006737 4.2e-25 117.9 98 67.3
FAN18G0759 Fragaria x ananassa HOM05D000003 ORTHO05D006737 7.2e-25 117.1 65 89.2
FAN13G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.1e-24 115.5 112 56.2
FvH4_4g10782 Fragaria vesca HOM05D000003 ORTHO05D006737 3.6e-24 114.8 110 55.5
FAN01G1087 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.6e-24 114.8 101 62.4
FAN14G2822 Fragaria x ananassa HOM05D000003 ORTHO05D006737 8.0e-24 113.6 61 90.2
FvH4_6g08250 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-23 113.2 61 90.2
FAN07G0617 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.3e-23 112.1 104 58.7
FAN09G3586 Fragaria x ananassa HOM05D004387 ORTHO05D005218 4.0e-23 111.3 98 63.3
FAN18G0619 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.2e-23 110.9 112 54.5
FAN11G0642 Fragaria x ananassa HOM05D000355 ORTHO05D000227 3.4e-22 108.2 65 83.1
FAN19G2165 Fragaria x ananassa HOM05D007821 ORTHO05D009897 7.5e-22 107.1 90 64.4
FAN01G2975 Fragaria x ananassa HOM05D000003 ORTHO05D006737 6.3e-21 104.0 99 56.6
FvH4_6g06990 Fragaria vesca HOM05D000003 ORTHO05D006737 5.4e-20 100.9 89 65.2
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.9e-19 97.4 73 64.4
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 5.9e-19 97.4 77 64.9
FvH4_5g04911 Fragaria vesca HOM05D000003 ORTHO05D006737 7.7e-19 97.1 67 73.1
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.3e-18 96.3 60 75.0
RcHm_v2.0_Chr6g0286611 Rosa chinensis HOM05D000003 ORTHO05D006737 3.8e-18 94.7 60 75.0
FvH4_6g32941 Fragaria vesca HOM05D000003 ORTHO05D006737 5.0e-18 94.4 107 49.5
RcHm_v2.0_Chr5g0031961 Rosa chinensis HOM05D000003 ORTHO05D006737 5.0e-18 94.4 60 71.7
RcHm_v2.0_Chr2g0125521 Rosa chinensis HOM05D000003 ORTHO05D006737 3.2e-17 91.7 58 70.7
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 4.2e-17 91.3 68 66.2
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.6e-16 89.4 118 43.2
RcHm_v2.0_Chr1g0336051 Rosa chinensis HOM05D000003 ORTHO05D006737 3.4e-14 81.6 118 43.2
FvH4_5g01582 Fragaria vesca HOM05D000003 ORTHO05D006737 4.4e-14 81.3 54 68.5
RcHm_v2.0_Chr1g0314431 Rosa chinensis HOM05D000003 ORTHO05D006737 5.7e-14 80.9 117 43.6
FvH4_6g20980 Fragaria vesca HOM05D017784 ORTHO05D006737 3.7e-13 78.2 103 47.6
RcHm_v2.0_Chr4g0395671 Rosa chinensis HOM05D000003 ORTHO05D006737 4.9e-13 77.8 107 44.9
FvH4_4g12942 Fragaria vesca HOM05D001338 ORTHO05D001239 1.1e-12 76.6 46 76.1
FAN08G0755 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.8e-12 75.9 52 65.4
RcHm_v2.0_Chr5g0033371 Rosa chinensis HOM05D000003 ORTHO05D006737 1.8e-12 75.9 114 42.1
FAN14G3227 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.1e-12 75.1 95 46.3
RcHm_v2.0_Chr2g0118121 Rosa chinensis HOM05D000003 ORTHO05D006737 4.1e-12 74.7 108 39.8
RcHm_v2.0_Chr5g0072311 Rosa chinensis HOM05D000003 ORTHO05D006737 7.0e-12 73.9 98 44.9
RcHm_v2.0_Chr7g0176911 Rosa chinensis HOM05D000003 ORTHO05D006737 9.2e-12 73.6 110 40.0
FvH4_3g20371 Fragaria vesca HOM05D000003 ORTHO05D000004 1.6e-11 72.8 114 36.8
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 2.0e-11 72.4 114 39.5
FvH4_2g00211 Fragaria vesca HOM05D000003 ORTHO05D006737 2.7e-11 72.0 115 40.0
FAN05G1347 Fragaria x ananassa HOM05D015760 ORTHO05D020672 7.8e-11 70.5 63 52.4
FvH4_4g20982 Fragaria vesca HOM05D000003 ORTHO05D006737 1.0e-10 70.1 114 36.0
FAN19G0368 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.3e-10 69.7 67 53.7
RcHm_v2.0_Chr1g0348191 Rosa chinensis HOM05D000003 ORTHO05D006737 1.3e-10 69.7 59 55.9
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 1.7e-10 69.3 112 38.4
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 3.8e-10 68.2 108 34.3
FAN01G2436 Fragaria x ananassa HOM05D000003 ORTHO05D006737 3.8e-10 68.2 106 39.6
FvH4_3g30681 Fragaria vesca HOM05D000003 ORTHO05D000006 6.6e-10 67.4 90 42.2
FvH4_4g01552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.1e-09 66.6 61 50.8
FAN04G2364 Fragaria x ananassa HOM05D030836 ORTHO05D035801 1.5e-09 66.2 33 97.0
FvH4_6g52701 Fragaria vesca HOM05D000003 ORTHO05D006737 1.9e-09 65.9 108 34.3
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.9e-09 65.9 64 48.4
FAN16G3138 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.9e-09 65.9 64 50.0
FAN25G3140 Fragaria x ananassa HOM05D000003 ORTHO05D006737 9.5e-09 63.5 96 39.6
RcHm_v2.0_Chr7g0198361 Rosa chinensis HOM05D000003 ORTHO05D006737 9.5e-09 63.5 108 37.0
FAN04G0671 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.2e-08 63.2 54 53.7
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 1.6e-08 62.8 61 49.2
RcHm_v2.0_Chr5g0004021 Rosa chinensis HOM05D000003 ORTHO05D006737 2.8e-08 62.0 56 57.1
FAN05G1674 Fragaria x ananassa HOM05D038108 ORTHO05D006737 1.0e-07 60.1 65 44.6
FAN22G0118 Fragaria x ananassa HOM05D001283 ORTHO05D001109 1.4e-07 59.7 57 47.4
RcHm_v2.0_Chr7g0212601 Rosa chinensis HOM05D000003 ORTHO05D006737 1.4e-07 59.7 56 55.4
FAN01G1551 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.8e-07 59.3 56 50.0
FAN07G0587 Fragaria x ananassa HOM05D000003 ORTHO05D006737 2.3e-07 58.9 57 47.4
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 2.3e-07 58.9 59 52.5
RcHm_v2.0_Chr5g0065261 Rosa chinensis HOM05D000003 ORTHO05D006737 3.0e-07 58.5 56 53.6
RcHm_v2.0_Chr6g0288751 Rosa chinensis HOM05D000003 ORTHO05D006737 3.0e-07 58.5 56 53.6
FAN03G1105 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.2e-07 57.8 56 50.0
FAN26G2731 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.2e-07 57.8 57 52.6
FAN12G0644 Fragaria x ananassa HOM05D000003 ORTHO05D006737 1.5e-06 56.2 59 57.6
RcHm_v2.0_Chr6g0260491 Rosa chinensis HOM05D000003 ORTHO05D006737 3.4e-06 55.1 53 52.8
FvH4_3g27973 Fragaria vesca HOM05D000003 ORTHO05D006737 4.4e-06 54.7 100 34.0
FAN09G1162 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.7e-06 54.3 45 57.8
FAN14G3095 Fragaria x ananassa HOM05D004368 ORTHO05D004990 7.5e-06 53.9 91 35.2


User provided reference genes

Program Settings