Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.9e-150 535.8 272 100.0
FvH4_5g26851 Fragaria vesca HOM05D011292 ORTHO05D013599 7.8e-51 204.9 124 82.3
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.3e-45 187.6 95 100.0
FvH4_5g38900 Fragaria vesca HOM05D011292 ORTHO05D013599 2.1e-43 180.3 123 76.4
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.3e-42 177.6 95 94.7
FAN14G2600 Fragaria x ananassa HOM05D011292 ORTHO05D013599 7.3e-41 171.8 131 72.5
FAN06G3041 Fragaria x ananassa HOM05D011292 ORTHO05D013599 2.1e-40 170.2 119 75.6
FAN06G4747 Fragaria x ananassa HOM05D011292 ORTHO05D013599 2.1e-40 170.2 119 75.6
FvH4_7g10800 Fragaria vesca HOM05D011292 ORTHO05D013599 2.8e-40 169.9 117 76.9
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.1e-40 168.3 96 90.6
FvH4_6g19840 Fragaria vesca HOM05D011292 ORTHO05D013599 1.8e-39 167.2 119 74.8
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 8.9e-39 164.9 95 91.6
FvH4_6g26281 Fragaria vesca HOM05D011292 ORTHO05D013599 1.2e-38 164.5 108 79.6
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 9.6e-33 144.8 102 78.4
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.5e-25 120.2 102 62.7
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 2.1e-24 117.1 99 64.6
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 2.8e-24 116.7 99 62.6
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 8.1e-24 115.2 96 63.5
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.4e-23 113.6 97 61.9
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 9.0e-23 111.7 96 62.5
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 1.2e-22 111.3 104 61.5
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.2e-22 111.3 103 61.2
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 2.0e-22 110.5 100 57.0
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 3.4e-22 109.8 102 58.8
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 3.4e-22 109.8 96 63.5
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 4.5e-22 109.4 98 60.2
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 5.8e-22 109.0 101 55.4
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.3e-21 107.8 101 60.4
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.7e-21 107.5 104 62.5
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 1.7e-21 107.5 98 60.2
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.2e-21 107.1 104 62.5
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 2.2e-21 107.1 104 62.5
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 2.9e-21 106.7 102 57.8
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 4.9e-21 105.9 93 58.1
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 6.4e-21 105.5 100 58.0
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 6.4e-21 105.5 101 60.4
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 8.4e-21 105.1 95 58.9
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 8.4e-21 105.1 91 61.5
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.1e-20 104.8 100 59.0
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.1e-20 104.8 103 56.3
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.4e-20 104.4 100 61.0
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.4e-20 104.4 103 59.2
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 2.4e-20 103.6 102 57.8
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 3.2e-20 103.2 103 55.3
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 3.2e-20 103.2 101 55.4
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 7.1e-20 102.1 95 56.8
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 7.1e-20 102.1 93 60.2
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 9.3e-20 101.7 99 58.6
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 9.3e-20 101.7 99 59.6
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 9.3e-20 101.7 105 57.1
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 9.3e-20 101.7 95 58.9
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 9.3e-20 101.7 95 56.8
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.2e-19 101.3 95 60.0
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 2.1e-19 100.5 105 54.3
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 2.1e-19 100.5 91 61.5
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 2.1e-19 100.5 101 56.4
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.1e-19 100.5 103 52.4
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 2.7e-19 100.1 99 58.6
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 2.7e-19 100.1 104 54.8
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 3.5e-19 99.8 91 61.5
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 3.5e-19 99.8 91 61.5
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 3.5e-19 99.8 98 54.1
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 4.6e-19 99.4 95 57.9
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 4.6e-19 99.4 102 56.9
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 4.6e-19 99.4 103 57.3
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 4.6e-19 99.4 102 52.9
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 6.0e-19 99.0 93 55.9
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 6.0e-19 99.0 96 59.4
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 6.0e-19 99.0 91 61.5
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 6.0e-19 99.0 99 56.6
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 7.9e-19 98.6 107 56.1
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 7.9e-19 98.6 106 51.9
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 7.9e-19 98.6 95 57.9
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 7.9e-19 98.6 101 58.4
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 7.9e-19 98.6 96 57.3
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.0e-18 98.2 98 54.1
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.3e-18 97.8 111 51.4
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.8e-18 97.4 97 54.6
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 1.8e-18 97.4 101 53.5
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.8e-18 97.4 97 55.7
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 2.3e-18 97.1 93 54.8
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 2.3e-18 97.1 111 52.3
FvH4_2g25460 Fragaria vesca HOM05D011292 ORTHO05D013599 3.0e-18 96.7 108 54.6
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 3.0e-18 96.7 102 55.9
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 5.1e-18 95.9 91 60.4
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 5.1e-18 95.9 101 58.4
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 1.5e-17 94.4 94 48.9
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.9e-17 94.0 94 55.3
FAN24G2038 Fragaria x ananassa HOM05D011292 ORTHO05D013599 2.5e-17 93.6 108 53.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 3.3e-17 93.2 103 50.5
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 3.3e-17 93.2 105 54.3
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 4.3e-17 92.8 111 50.5
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 4.3e-17 92.8 98 52.0
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 5.6e-17 92.4 91 56.0
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 7.4e-17 92.0 98 53.1
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.6e-17 91.7 113 47.8
FAN13G0642 Fragaria x ananassa HOM05D011292 ORTHO05D013599 2.1e-16 90.5 105 54.3
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 3.6e-16 89.7 103 51.5
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 6.2e-16 89.0 111 46.8
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.2e-16 89.0 88 53.4
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 8.1e-16 88.6 92 56.5
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 8.1e-16 88.6 92 56.5
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.4e-15 87.8 99 50.5
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.4e-15 87.8 103 51.5
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.6e-14 83.6 89 51.7
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 3.4e-14 83.2 92 48.9
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 3.4e-14 83.2 102 51.0
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.3e-13 81.3 101 46.5
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 3.8e-13 79.7 98 46.9
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 6.4e-13 79.0 102 44.1
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 2.4e-12 77.0 113 45.1
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 4.2e-12 76.3 108 42.6
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 5.5e-12 75.9 52 69.2
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 1.6e-11 74.3 117 43.6
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 2.7e-11 73.6 46 71.7
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.3e-09 66.2 94 45.7
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 7.4e-09 65.5 96 40.6
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 6.2e-08 62.4 89 40.4
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 6.2e-08 62.4 49 59.2
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.1e-07 61.6 66 56.1
RcHm_v2.0_Chr1g0333271 Rosa chinensis HOM05D011292 ORTHO05D013599 1.1e-07 61.6 50 70.0
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 1.4e-07 61.2 49 53.1
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 3.1e-07 60.1 53 60.4
RcHm_v2.0_Chr2g0099411 Rosa chinensis HOM05D011292 ORTHO05D013599 3.1e-07 60.1 47 57.4
RcHm_v2.0_Chr7g0233531 Rosa chinensis HOM05D011292 ORTHO05D013599 5.3e-07 59.3 47 55.3


User provided reference genes

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