Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 5.6e-71 270.8 131 100.0
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 1.8e-69 265.8 131 97.7
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 2.4e-42 175.6 91 95.6
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 3.9e-40 168.3 90 87.8
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 2.5e-39 165.6 90 84.4
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 2.5e-39 165.6 89 87.6
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 4.3e-39 164.9 91 87.9
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 4.3e-39 164.9 90 86.7
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 5.6e-39 164.5 90 85.6
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 5.6e-39 164.5 90 85.6
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 5.6e-39 164.5 90 85.6
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 7.3e-39 164.1 93 83.9
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 7.3e-39 164.1 90 85.6
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 7.3e-39 164.1 90 85.6
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.3e-38 163.3 90 85.6
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.3e-38 163.3 90 85.6
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 1.3e-38 163.3 90 85.6
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 1.6e-38 162.9 90 84.4
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 2.1e-38 162.5 90 85.6
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 2.1e-38 162.5 90 85.6
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 2.8e-38 162.2 90 84.4
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 2.8e-38 162.2 90 82.2
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 3.6e-38 161.8 90 85.6
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 3.6e-38 161.8 91 84.6
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 4.8e-38 161.4 90 83.3
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 6.2e-38 161.0 90 82.2
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 1.1e-37 160.2 88 87.5
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 1.1e-37 160.2 90 82.2
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.8e-37 159.5 90 84.4
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 2.4e-37 159.1 87 85.1
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 2.4e-37 159.1 90 82.2
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 3.1e-37 158.7 93 78.5
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 4.0e-37 158.3 89 82.0
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 4.0e-37 158.3 90 81.1
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 5.3e-37 157.9 90 83.3
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 6.9e-37 157.5 88 83.0
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 9.0e-37 157.1 90 81.1
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 9.0e-37 157.1 90 83.3
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 9.0e-37 157.1 88 83.0
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 1.2e-36 156.8 90 81.1
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.2e-36 156.8 90 82.2
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 1.5e-36 156.4 90 82.2
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 1.5e-36 156.4 90 81.1
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 2.0e-36 156.0 90 82.2
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 2.6e-36 155.6 91 80.2
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 2.6e-36 155.6 89 83.1
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 2.6e-36 155.6 89 83.1
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 4.4e-36 154.8 89 82.0
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 4.4e-36 154.8 89 80.9
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 7.6e-36 154.1 116 66.4
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 7.6e-36 154.1 90 81.1
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 9.9e-36 153.7 90 80.0
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 9.9e-36 153.7 90 80.0
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.3e-35 153.3 90 81.1
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 1.3e-35 153.3 88 81.8
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 1.3e-35 153.3 90 81.1
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 1.3e-35 153.3 88 80.7
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 2.2e-35 152.5 95 73.7
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 2.2e-35 152.5 89 80.9
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 2.2e-35 152.5 90 77.8
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 2.2e-35 152.5 90 76.7
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 2.9e-35 152.1 89 82.0
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 3.8e-35 151.8 90 81.1
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 3.8e-35 151.8 90 78.9
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 4.9e-35 151.4 90 76.7
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 6.4e-35 151.0 88 79.5
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 8.4e-35 150.6 87 81.6
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 1.9e-34 149.4 89 75.3
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 1.9e-34 149.4 89 77.5
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 3.2e-34 148.7 94 75.5
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 5.4e-34 147.9 89 77.5
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 5.4e-34 147.9 89 77.5
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 5.4e-34 147.9 89 77.5
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 5.4e-34 147.9 90 75.6
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 5.4e-34 147.9 90 75.6
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 7.1e-34 147.5 85 78.8
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 1.2e-33 146.7 89 76.4
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 1.2e-33 146.7 89 76.4
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 1.2e-33 146.7 89 76.4
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 1.2e-33 146.7 89 76.4
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 1.2e-33 146.7 89 76.4
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 2.7e-33 145.6 89 75.3
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 3.5e-33 145.2 92 72.8
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 4.6e-33 144.8 89 75.3
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 4.6e-33 144.8 89 75.3
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 4.6e-33 144.8 89 75.3
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 6.0e-33 144.4 89 75.3
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 6.0e-33 144.4 89 75.3
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 6.0e-33 144.4 89 75.3
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.3e-32 143.3 84 77.4
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 2.3e-32 142.5 89 75.3
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.9e-32 141.7 84 76.2
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 5.1e-32 141.4 132 59.1
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 6.6e-32 141.0 90 76.7
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 1.9e-31 139.4 86 75.6
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 1.9e-31 139.4 86 75.6
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 4.3e-31 138.3 88 75.0
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 4.3e-31 138.3 88 75.0
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 4.3e-31 138.3 88 71.6
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 3.6e-30 135.2 94 69.1
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 1.4e-29 133.3 90 73.3
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 2.4e-29 132.5 142 52.8
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 5.3e-29 131.3 119 57.1
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.8e-27 125.2 120 54.2
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 2.7e-25 119.0 66 83.3
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 7.9e-25 117.5 84 67.9
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 1.3e-24 116.7 66 81.8
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.8e-24 116.3 90 65.6
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 5.1e-24 114.8 118 58.5
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 6.7e-24 114.4 68 77.9
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 4.3e-23 111.7 65 78.5
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 5.6e-23 111.3 66 78.8
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 1.2e-20 103.6 64 76.6
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 2.2e-19 99.4 96 54.2
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 1.8e-16 89.7 95 52.6
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 2.3e-16 89.4 57 70.2
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 1.5e-15 86.7 89 52.8
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 3.3e-15 85.5 71 56.3
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 2.8e-14 82.4 84 46.4
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 1.4e-13 80.1 56 73.2
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 2.4e-13 79.3 66 65.2
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 3.1e-13 79.0 83 39.8
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 6.9e-13 77.8 60 66.7
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 1.5e-12 76.6 105 43.8
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 1.0e-11 73.9 60 63.3
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 2.3e-08 62.8 52 51.9
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 3.9e-08 62.0 67 46.3
Ciclev10027020m.g Citrus clementina HOM05D006364 ORTHO05D007968 7.4e-07 57.8 133 40.6
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 3.7e-06 55.5 71 38.0


User provided reference genes

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