Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g09962 Fragaria vesca HOM05D002480 ORTHO05D003145 2.9e-213 745.0 384 100.0
FAN14G5553 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.0e-166 587.8 388 83.2
FvH4_5g05871 Fragaria vesca HOM05D002480 ORTHO05D003145 2.5e-156 555.8 388 79.6
FAN18G1129 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.1e-134 481.5 373 74.8
FAN28G1574 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-85 320.9 328 56.4
FvH4_4g13551 Fragaria vesca HOM05D002480 ORTHO05D003145 2.6e-84 316.6 372 54.0
FAN23G2415 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-61 240.4 210 69.0
FvH4_3g34441 Fragaria vesca HOM05D002480 ORTHO05D003145 4.2e-50 203.0 332 43.1
FAN06G5011 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.6e-49 199.5 394 38.6
FAN03G2236 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-48 197.2 393 37.4
FAN02G1343 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-47 194.5 397 37.8
FAN15G1902 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.1e-46 190.7 352 38.9
FAN23G1644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-45 188.0 399 36.3
FAN09G1485 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-45 187.6 395 37.7
FAN26G0220 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.4e-45 187.2 388 36.9
FAN16G2492 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-45 186.0 390 36.2
FAN25G1938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-43 181.8 393 36.4
FAN28G0938 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-43 181.4 371 37.2
FAN23G2414 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-42 178.3 128 75.0
FAN26G3401 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-42 177.9 171 59.6
FAN28G0175 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.3e-42 175.3 395 36.7
FAN28G0569 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-40 171.0 378 36.2
FAN12G2038 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.7e-39 166.0 348 36.8
FAN11G3668 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.4e-39 165.6 344 35.8
FAN18G3922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.3e-38 162.5 389 33.9
FvH4_4g26661 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-37 161.4 332 36.4
FAN22G1509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-37 161.4 386 33.2
FAN18G1289 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-37 161.0 226 47.8
FAN12G0307 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-36 158.3 351 35.9
FAN25G0074 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-36 157.5 375 33.9
FAN13G0804 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.1e-34 151.8 366 36.3
FAN03G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-31 141.0 373 33.0
FvH4_1g22022 Fragaria vesca HOM05D002480 ORTHO05D003145 1.4e-29 134.8 356 33.7
FvH4_7g10071 Fragaria vesca HOM05D002480 ORTHO05D003145 4.1e-29 133.3 360 33.1
FAN26G2394 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.3e-29 132.9 120 55.0
FAN21G3182 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-29 132.5 126 52.4
FAN24G3444 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-28 131.3 395 33.9
FvH4_4g05731 Fragaria vesca HOM05D002480 ORTHO05D003145 2.0e-28 131.0 119 53.8
FvH4_6g31171 Fragaria vesca HOM05D002480 ORTHO05D003145 5.9e-28 129.4 283 36.7
FAN12G2566 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-27 127.9 184 43.5
FAN06G2914 Fragaria x ananassa HOM05D030718 ORTHO05D035531 2.2e-27 127.5 109 69.7
FvH4_2g24951 Fragaria vesca HOM05D002480 ORTHO05D003145 5.0e-27 126.3 395 33.4
FAN26G3149 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.5e-27 125.9 85 78.8
FvH4_6g07931 Fragaria vesca HOM05D002480 ORTHO05D003145 4.6e-25 119.8 356 29.2
FAN14G1957 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.1e-25 119.4 248 37.1
FAN11G1925 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-24 117.9 144 46.5
FAN16G2652 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-23 114.0 141 46.8
FvH4_4g13621 Fragaria vesca HOM05D002480 ORTHO05D003145 4.4e-23 113.2 112 50.0
FAN02G3411 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.7e-23 112.8 304 32.2
FAN27G0173 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.4e-23 112.5 129 46.5
FvH4_5g30551 Fragaria vesca HOM05D002480 ORTHO05D003145 6.3e-22 109.4 119 44.5
FAN18G3832 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.1e-21 107.1 120 44.2
FAN11G1368 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.9e-21 105.9 114 54.4
FvH4_6g16701 Fragaria vesca HOM05D002480 ORTHO05D003145 5.9e-20 102.8 356 30.6
FAN25G1052 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-19 102.1 282 30.9
FvH4_6g13840 Fragaria vesca HOM05D002480 ORTHO05D003145 2.5e-18 97.4 93 46.2
FAN18G1209 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.2e-18 97.1 297 28.6
FvH4_1g27932 Fragaria vesca HOM05D002480 ORTHO05D003145 7.2e-18 95.9 157 40.8
FAN18G3828 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.2e-18 95.9 366 25.7
FAN12G1965 Fragaria x ananassa HOM05D002480 ORTHO05D003145 9.4e-18 95.5 132 40.9
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 2.7e-17 94.0 117 42.7
FAN12G0049 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.7e-17 94.0 350 28.9
FAN05G0293 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-17 93.6 193 31.6
FvH4_7g00030 Fragaria vesca HOM05D002480 ORTHO05D003145 4.7e-17 93.2 331 29.6
FAN21G1379 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.9e-17 92.4 276 31.5
FvH4_2g04010 Fragaria vesca HOM05D002480 ORTHO05D003145 1.8e-16 91.3 114 43.9
FAN02G4274 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-16 91.3 110 40.9
FAN09G0095 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-16 91.3 103 49.5
FAN02G2084 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-15 88.2 109 41.3
FAN08G0843 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.5e-15 88.2 238 30.3
FAN08G0647 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-15 87.8 286 30.8
FAN16G1335 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.4e-15 85.9 94 44.7
FvH4_5g24922 Fragaria vesca HOM05D002480 ORTHO05D003145 9.7e-15 85.5 301 29.2
FAN16G1534 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-14 84.0 119 43.7
FAN09G1541 Fragaria x ananassa HOM05D002480 ORTHO05D003145 6.3e-14 82.8 190 36.3
FAN15G2755 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.2e-14 82.4 94 41.5
FAN05G4508 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-13 81.6 184 34.8
FAN10G2984 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.4e-13 81.6 356 27.2
FAN05G3376 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-13 81.3 244 30.7
FAN21G2625 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-13 81.3 83 49.4
FvH4_3g26791 Fragaria vesca HOM05D002480 ORTHO05D003145 7.0e-13 79.3 163 35.6
FvH4_4g05732 Fragaria vesca HOM05D002480 ORTHO05D003145 9.1e-13 79.0 145 33.1
FAN06G2358 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-12 78.6 102 39.2
FAN19G0872 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-12 78.6 220 33.2
FAN26G1082 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-12 78.6 267 31.8
FvH4_5g37291 Fragaria vesca HOM05D002480 ORTHO05D003145 2.0e-12 77.8 286 28.3
FAN26G3107 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-12 77.8 80 48.8
FAN13G3053 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.6e-12 77.4 197 31.5
FvH4_1g20081 Fragaria vesca HOM05D002480 ORTHO05D003145 3.5e-12 77.0 99 43.4
FAN19G0644 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.9e-12 76.3 183 37.7
FvH4_2g07601 Fragaria vesca HOM05D002480 ORTHO05D003145 7.7e-12 75.9 79 48.1
FAN04G2250 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.3e-11 75.1 109 37.6
FAN14G0670 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-11 74.7 63 55.6
FAN18G1535 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.7e-11 74.7 90 41.1
FAN01G0335 Fragaria x ananassa HOM05D013532 ORTHO05D029431 2.2e-11 74.3 136 33.8
FvH4_5g36132 Fragaria vesca HOM05D002480 ORTHO05D003145 5.0e-11 73.2 73 45.2
FvH4_7g01201 Fragaria vesca HOM05D002480 ORTHO05D003145 5.0e-11 73.2 100 37.0
FAN06G1988 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.0e-11 73.2 160 33.8
FvH4_1g21331 Fragaria vesca HOM05D002480 ORTHO05D035625 6.5e-11 72.8 160 36.9
FAN16G1666 Fragaria x ananassa HOM05D002480 ORTHO05D003145 8.5e-11 72.4 79 46.8
FAN16G2760 Fragaria x ananassa HOM05D033622 ORTHO05D003145 8.5e-11 72.4 290 27.6
FAN02G1315 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-10 71.2 111 34.2
FAN02G4154 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-10 71.2 111 34.2
FAN07G2297 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.9e-10 71.2 191 30.9
FAN12G2093 Fragaria x ananassa HOM05D002480 ORTHO05D045445 1.9e-10 71.2 62 53.2
FAN10G3390 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.2e-10 70.5 327 26.0
FAN07G1922 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.2e-10 70.1 77 42.9
FAN05G1984 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.2e-09 68.6 86 44.2
Nitab4.5_0000470g0220 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.6e-09 68.2 173 27.7
FAN08G2846 Fragaria x ananassa HOM05D026730 ORTHO05D003145 2.1e-09 67.8 50 74.0
FvH4_4g07321 Fragaria vesca HOM05D002480 ORTHO05D045568 2.7e-09 67.4 56 53.6
FAN13G0545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-09 67.0 105 39.0
FAN21G2545 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.6e-09 67.0 72 48.6
QL11p000243 Quercus lobata HOM05D000003 ORTHO05D000126 3.6e-09 67.0 136 33.8
FAN10G3651 Fragaria x ananassa HOM05D013532 ORTHO05D029431 6.1e-09 66.2 141 29.1
FAN07G2468 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.0e-08 65.5 119 36.1
RcHm_v2.0_Chr1g0344871 Rosa chinensis HOM05D003375 ORTHO05D004719 1.4e-08 65.1 118 34.7
FAN18G2215 Fragaria x ananassa HOM05D002480 ORTHO05D003145 1.8e-08 64.7 91 41.8
FAN25G0562 Fragaria x ananassa HOM05D033622 ORTHO05D003145 1.8e-08 64.7 69 39.1
FAN06G4257 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.3e-08 64.3 174 32.2
FAN24G1866 Fragaria x ananassa HOM05D002480 ORTHO05D046333 2.3e-08 64.3 69 43.5
FAN07G0305 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.0e-08 63.9 49 57.1
FvH4_2g11910 Fragaria vesca HOM05D002480 ORTHO05D046333 5.2e-08 63.2 69 43.5
FAN07G1539 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-08 63.2 71 47.9
FAN20G0719 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-08 63.2 79 41.8
FAN28G0509 Fragaria x ananassa HOM05D002480 ORTHO05D003145 5.2e-08 63.2 117 37.6
FAN09G3009 Fragaria x ananassa HOM05D005441 ORTHO05D006879 1.2e-07 62.0 52 65.4
BcaB01g00938 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-07 61.2 117 33.3
FvH4_3g15420 Fragaria vesca HOM05D002480 ORTHO05D003145 2.0e-07 61.2 135 34.8
FAN05G3618 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.0e-07 61.2 226 29.2
QL03p023077 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-07 60.8 116 35.3
QL04p035086 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-07 60.8 112 33.9
FAN06G0657 Fragaria x ananassa HOM05D013532 ORTHO05D029431 3.3e-07 60.5 137 29.2
FAN13G1471 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.3e-07 60.5 101 38.6
FAN25G1692 Fragaria x ananassa HOM05D002480 ORTHO05D003145 3.3e-07 60.5 96 36.5
QL03p031860 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-07 60.1 120 32.5
QL05p083215 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-07 59.7 109 33.9
QL08p015789 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-07 59.7 122 33.6
FAN14G4607 Fragaria x ananassa HOM05D002480 ORTHO05D003145 7.5e-07 59.3 68 45.6
QL02p008707 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-07 59.3 110 31.8
QL03p061024 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-07 59.3 120 32.5
FAN19G2809 Fragaria x ananassa HOM05D002480 ORTHO05D046463 9.7e-07 58.9 96 37.5
FvH4_1g11460 Fragaria vesca HOM05D002480 ORTHO05D046463 1.3e-06 58.5 96 37.5
Aa31LG6G9170 Aethionema arabicum HOM05D000496 ORTHO05D000411 2.2e-06 57.8 137 29.9
FvH4_6g18941 Fragaria vesca HOM05D008470 ORTHO05D010644 2.2e-06 57.8 78 38.5
FAN03G0564 Fragaria x ananassa HOM05D013532 ORTHO05D003145 2.2e-06 57.8 138 32.6
FAN11G1941 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.2e-06 57.8 71 42.3
FAN18G2064 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.2e-06 57.8 276 25.7
QL02p061202 Quercus lobata HOM05D000545 ORTHO05D000539 2.2e-06 57.8 132 31.8
AUR62023538 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.8e-06 57.4 118 28.8
FAN03G0146 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.8e-06 57.4 167 29.9
FAN08G0214 Fragaria x ananassa HOM05D002480 ORTHO05D003145 2.8e-06 57.4 59 44.1
FAN12G1540 Fragaria x ananassa HOM05D003375 ORTHO05D004719 2.8e-06 57.4 146 29.5
Aa31LG1G4950 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.7e-06 57.0 115 30.4
Aa31sc1015G10 Aethionema arabicum HOM05D000496 ORTHO05D000411 3.7e-06 57.0 140 28.6
FvH4_5g12461 Fragaria vesca HOM05D002480 ORTHO05D003145 4.8e-06 56.6 80 38.8
Peaxi162Scf00946g00052 Petunia axillaris HOM05D000003 ORTHO05D000126 4.8e-06 56.6 109 32.1
QL03p060940 Quercus lobata HOM05D000005 ORTHO05D000012 4.8e-06 56.6 120 31.7
QL04p035033 Quercus lobata HOM05D000003 ORTHO05D000126 4.8e-06 56.6 110 31.8
QL09p054237 Quercus lobata HOM05D000003 ORTHO05D000126 4.8e-06 56.6 112 33.0
BcaC08g42965 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-06 56.2 107 30.8
FAN10G1469 Fragaria x ananassa HOM05D003375 ORTHO05D004719 6.3e-06 56.2 178 29.2
FAN22G2411 Fragaria x ananassa HOM05D002480 ORTHO05D045568 6.3e-06 56.2 56 53.6
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 6.3e-06 56.2 110 31.8
QL05p063585 Quercus lobata HOM05D000003 ORTHO05D000126 6.3e-06 56.2 181 29.3
CANSAT56G1005 Cannabis sativa HOM05D000003 ORTHO05D000126 8.2e-06 55.8 118 28.0
AUR62011319 Chenopodium quinoa HOM05D000003 ORTHO05D000126 8.2e-06 55.8 89 32.6
Thhalv10012330m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.2e-06 55.8 122 32.8
FAN05G0253 Fragaria x ananassa HOM05D013195 ORTHO05D025463 8.2e-06 55.8 123 30.9
Prupe.3G153700 Prunus persica HOM05D000003 ORTHO05D000126 8.2e-06 55.8 101 36.6


User provided reference genes

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