Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g09960 Fragaria vesca HOM05D001439 ORTHO05D046442 1.3e-136 490.0 282 100.0
FAN12G4075 Fragaria x ananassa HOM05D001439 ORTHO05D002726 2.0e-113 412.9 248 97.6
FAN12G1448 Fragaria x ananassa HOM05D001439 ORTHO05D046442 1.4e-103 380.2 282 79.8
FAN16G2831 Fragaria x ananassa HOM05D001439 ORTHO05D002726 6.3e-88 328.2 203 84.7
FAN21G0276 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.5e-84 317.0 190 86.3
FAN11G1486 Fragaria x ananassa HOM05D001439 ORTHO05D002726 3.5e-78 295.8 177 86.4
FvH4_3g08620 Fragaria vesca HOM05D001439 ORTHO05D002726 1.3e-77 293.9 177 85.3
FAN25G1066 Fragaria x ananassa HOM05D001439 ORTHO05D002726 2.3e-77 293.1 177 85.3
RcHm_v2.0_Chr5g0009221 Rosa chinensis HOM05D001439 ORTHO05D002726 3.7e-64 249.2 149 83.2
Prupe.4G052600 Prunus persica HOM05D001439 ORTHO05D002726 1.0e-53 214.5 173 66.5
MD10G1289100 Malus domestica HOM05D001439 ORTHO05D002726 2.9e-48 196.4 165 63.0
MD05G1310200 Malus domestica HOM05D001439 ORTHO05D002726 6.4e-48 195.3 172 61.6
CiPaw.09G063400 Carya illinoinensis HOM05D001439 ORTHO05D002726 2.8e-43 179.9 197 53.8
Haze_06382 Corylus avellana HOM05D001439 ORTHO05D002726 3.1e-42 176.4 198 54.0
Cfa000527 Carpinus fangiana HOM05D001439 ORTHO05D002726 1.6e-38 164.1 186 52.2
QL05p042276 Quercus lobata HOM05D001439 ORTHO05D002726 4.4e-33 146.0 154 51.3
GSVIVG01021113001 Vitis vinifera HOM05D001439 ORTHO05D002726 5.8e-33 145.6 175 48.0
Sabra04G0030600 Salix brachista HOM05D001439 ORTHO05D002726 8.7e-29 131.7 193 44.6
Sed0010792 Sechium edule HOM05D001439 ORTHO05D002726 1.6e-27 127.5 193 42.5
Potri.004G048675 Populus trichocarpa HOM05D001439 ORTHO05D002726 1.1e-26 124.8 183 46.4
Thecc.06G181000 Theobroma cacao HOM05D001439 ORTHO05D002726 1.4e-26 124.4 158 45.6
Glyma.13G175200 Glycine max HOM05D001439 ORTHO05D002726 4.0e-26 122.9 181 41.4
Glyma.13G235300 Glycine max HOM05D001439 ORTHO05D002726 4.0e-26 122.9 200 40.5
ClCG01G023260 Citrullus lanatus HOM05D001439 ORTHO05D002726 5.3e-26 122.5 160 43.8
Sed0000156 Sechium edule HOM05D001439 ORTHO05D002726 2.6e-25 120.2 166 43.4
Ca_18589_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 2.2e-24 117.1 180 40.0
CsaV3_6G050410 Cucumis sativus L. HOM05D001439 ORTHO05D002726 2.2e-24 117.1 165 44.2
arahy.Tifrunner.gnm1.ann1.1H2VR5 Arachis hypogaea HOM05D001439 ORTHO05D002726 3.8e-24 116.3 197 39.1
arahy.Tifrunner.gnm1.ann1.49JRJ0 Arachis hypogaea HOM05D001439 ORTHO05D002726 3.8e-24 116.3 197 39.1
TWI38G1950 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 3.8e-24 116.3 175 44.6
VMungo0251G2748 Vigna mungo HOM05D001439 ORTHO05D002726 3.8e-24 116.3 181 42.0
MELO3C007260.2 Cucumis melo HOM05D001439 ORTHO05D002726 4.9e-24 115.9 169 41.4
Glyma.07G201200 Glycine max HOM05D001439 ORTHO05D002726 4.2e-23 112.8 199 39.7
PGR004G2384 Punica granatum HOM05D001439 ORTHO05D002726 5.5e-23 112.5 175 40.6
Phvul.002G232200 Phaseolus vulgaris HOM05D001439 ORTHO05D002726 2.7e-22 110.2 199 39.7
VMungo0540G1437 Vigna mungo HOM05D001439 ORTHO05D002726 2.7e-22 110.2 171 43.9
COL.COLO4_31415 Corchorus olitorius HOM05D001439 ORTHO05D002726 6.0e-22 109.0 151 43.0
Lalb_Chr16g0384011 Lupinus albus HOM05D001439 ORTHO05D002726 3.0e-21 106.7 163 39.3
Dinv17354 Davidia involucrata HOM05D001439 ORTHO05D002726 5.1e-21 105.9 172 39.5
Lalb_Chr15g0089681 Lupinus albus HOM05D001439 ORTHO05D002726 1.5e-20 104.4 198 36.9
Gohir.A06G211700 Gossypium hirsutum HOM05D001439 ORTHO05D002726 3.3e-20 103.2 151 41.7
Gorai.010G243500 Gossypium raimondii HOM05D001439 ORTHO05D002726 7.4e-20 102.1 161 39.1
arahy.Tifrunner.gnm1.ann1.DG2K05 Arachis hypogaea HOM05D001439 ORTHO05D002726 2.1e-19 100.5 228 45.6
CANSAT35G2047 Cannabis sativa HOM05D001439 ORTHO05D002726 2.8e-19 100.1 149 40.9
Ciclev10014022m.g Citrus clementina HOM05D001439 ORTHO05D002726 4.8e-19 99.4 186 36.0
Phvul.006G182000 Phaseolus vulgaris HOM05D001439 ORTHO05D002726 3.1e-18 96.7 165 38.8
Duzib235G0176 Durio zibethinus HOM05D001439 ORTHO05D002726 6.9e-18 95.5 153 35.9
Medtr2g014490 Medicago truncatula HOM05D001439 ORTHO05D002726 6.9e-18 95.5 197 34.5
Cpa.g.sc27.3 Carica papaya HOM05D001439 ORTHO05D002726 9.0e-18 95.1 137 41.6
Psat7g116080 Pisum sativum HOM05D001439 ORTHO05D002726 9.0e-18 95.1 192 33.9
Ca_00363_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 1.2e-17 94.7 193 35.8
TPR.G11655 Trifolium pratense HOM05D001439 ORTHO05D002726 2.6e-17 93.6 189 35.4
Lj4g0015660 Lotus japonicus HOM05D001439 ORTHO05D002726 1.0e-16 91.7 143 42.0
CSS0043150 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 1.3e-16 91.3 156 41.7
Gorai.010G256900 Gossypium raimondii HOM05D001439 ORTHO05D002726 1.3e-16 91.3 146 36.3
Psat1g202960 Pisum sativum HOM05D001439 ORTHO05D002726 1.7e-16 90.9 195 33.8
Potri.011G057700 Populus trichocarpa HOM05D001439 ORTHO05D002726 2.2e-16 90.5 135 44.4
Sabra11G0039900 Salix brachista HOM05D001439 ORTHO05D002726 2.9e-16 90.1 138 43.5
TPR.G19912 Trifolium pratense HOM05D001439 ORTHO05D002726 2.9e-16 90.1 177 36.7
Manes.17G049300 Manihot esculenta HOM05D001439 ORTHO05D002726 1.9e-15 87.4 159 36.5
TAR627G0298 Trochodendron aralioides HOM05D001439 ORTHO05D002726 2.5e-15 87.0 142 40.1
FAN05G3838 Fragaria x ananassa HOM05D001439 ORTHO05D002726 4.2e-15 86.3 191 34.6
Ciclev10014023m.g Citrus clementina HOM05D001439 ORTHO05D002726 7.1e-15 85.5 153 41.2
FAN09G0796 Fragaria x ananassa HOM05D001439 ORTHO05D002726 9.3e-15 85.1 169 37.9
TWI38G1102 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 3.5e-14 83.2 174 35.6
Eucgr.D00596 Eucalyptus grandis HOM05D001439 ORTHO05D002726 4.6e-14 82.8 172 37.2
Lalb_Chr20g0121581 Lupinus albus HOM05D001439 ORTHO05D002726 6.0e-14 82.4 179 34.1
QL08p040227 Quercus lobata HOM05D001439 ORTHO05D002726 7.9e-14 82.0 159 35.2
arahy.Tifrunner.gnm1.ann1.P48F6M Arachis hypogaea HOM05D001439 ORTHO05D002726 1.3e-13 81.3 161 33.5
Migut.M01107 Erythranthe guttata HOM05D001439 ORTHO05D002726 1.3e-13 81.3 157 38.2
Lj2C292T8 Lonicera japonica HOM05D001439 ORTHO05D002726 3.9e-13 79.7 175 34.9
TAR626G0121 Trochodendron aralioides HOM05D001439 ORTHO05D002726 5.1e-13 79.3 143 36.4
Cfa014661 Carpinus fangiana HOM05D001439 ORTHO05D002726 1.5e-12 77.8 189 33.3
Gohir.A06G211600 Gossypium hirsutum HOM05D001439 ORTHO05D002726 1.9e-12 77.4 144 32.6
Gohir.D06G209600 Gossypium hirsutum HOM05D001439 ORTHO05D002726 2.5e-12 77.0 144 32.6
Lalb_Chr18g0059381 Lupinus albus HOM05D001439 ORTHO05D002726 2.5e-12 77.0 181 30.4
Lj6g0010323 Lotus japonicus HOM05D001439 ORTHO05D002726 3.3e-12 76.6 207 31.4
GSVIVG01020605001 Vitis vinifera HOM05D001439 ORTHO05D002726 4.3e-12 76.3 154 36.4
Cpa.g.sc83.97 Carica papaya HOM05D001439 ORTHO05D002726 1.6e-11 74.3 152 34.2
Haze_13244 Corylus avellana HOM05D001439 ORTHO05D002726 2.8e-11 73.6 164 34.8
Nn1g04237 Nelumbo nucifera HOM05D001439 ORTHO05D002726 2.8e-11 73.6 144 36.1
Duzib160G0499 Durio zibethinus HOM05D001439 ORTHO05D002726 3.7e-11 73.2 116 39.7
Gohir.D06G209500 Gossypium hirsutum HOM05D001439 ORTHO05D002726 8.2e-11 72.0 93 38.7
Thecc.02G186300 Theobroma cacao HOM05D001439 ORTHO05D002726 1.8e-10 70.9 159 34.0
FAN14G5737 Fragaria x ananassa HOM05D001439 ORTHO05D002726 6.9e-10 68.9 169 32.0
Actinidia10999 Actinidia chinensis HOM05D001439 ORTHO05D002726 1.2e-09 68.2 176 30.1
Medtr4g088375 Medicago truncatula HOM05D001439 ORTHO05D002726 1.2e-09 68.2 177 33.3
CAN.G529.57 Capsicum annuum HOM05D001439 ORTHO05D002726 1.5e-09 67.8 141 34.0
Nn1g06413 Nelumbo nucifera HOM05D001439 ORTHO05D002726 1.5e-09 67.8 146 31.5
FvH4_6g26700 Fragaria vesca HOM05D001439 ORTHO05D002726 2.6e-09 67.0 169 31.4
Dinv06859 Davidia involucrata HOM05D001439 ORTHO05D002726 3.4e-09 66.6 154 31.8
FAN02G3093 Fragaria x ananassa HOM05D001439 ORTHO05D002726 1.0e-08 65.1 170 30.6
CSS0016347 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 1.3e-08 64.7 155 30.3
CSS0047003 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 1.3e-08 64.7 155 30.3
Duzib132G0536 Durio zibethinus HOM05D001439 ORTHO05D002726 1.3e-08 64.7 159 30.8
Lj1C697G7 Lonicera japonica HOM05D001439 ORTHO05D002726 1.3e-08 64.7 184 32.6
vmacro12346 Vaccinium macrocarpon HOM05D001439 ORTHO05D002726 1.7e-08 64.3 154 34.4
RcHm_v2.0_Chr2g0127081 Rosa chinensis HOM05D001439 ORTHO05D002726 8.4e-08 62.0 160 31.2
SGA_v2.0_scaffold22G09664 Striga asiatica HOM05D001439 ORTHO05D002726 8.4e-08 62.0 145 33.8
Manes.13G141800 Manihot esculenta HOM05D001439 ORTHO05D002726 1.1e-07 61.6 157 28.7
Glyma.06G288900 Glycine max HOM05D001439 ORTHO05D002726 2.5e-07 60.5 155 30.3
AUR62038987 Chenopodium quinoa HOM05D001439 ORTHO05D002726 3.2e-07 60.1 155 28.4
Gorai.008G155100 Gossypium raimondii HOM05D001439 ORTHO05D002726 3.2e-07 60.1 163 31.3
Peaxi162Scf00926g00006 Petunia axillaris HOM05D001439 ORTHO05D002726 3.2e-07 60.1 141 31.9
Hma1.2p1_0558F.1_g178470 Hydrangea macrophylla HOM05D001439 ORTHO05D002726 4.2e-07 59.7 179 31.8
Rhsim06G0136900 Rhododendron simsii HOM05D001439 ORTHO05D002726 7.2e-07 58.9 152 32.9
RhsimUnG0013600 Rhododendron simsii HOM05D001439 ORTHO05D002726 7.2e-07 58.9 152 32.9
Gohir.D12G143800 Gossypium hirsutum HOM05D001439 ORTHO05D002726 9.3e-07 58.5 163 31.9
EL10Ac9g20819 Beta vulgaris HOM05D001439 ORTHO05D002726 1.2e-06 58.2 159 27.0
Atru.chr6.2869 Acer truncatum HOM05D001439 ORTHO05D002726 1.6e-06 57.8 168 29.8
Sabra07G0109800 Salix brachista HOM05D001439 ORTHO05D002726 1.6e-06 57.8 162 29.6
Solyc02g077660.3 Solanum lycopersicum HOM05D001439 ORTHO05D002726 1.6e-06 57.8 140 30.7
Ca_18919_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 2.1e-06 57.4 151 29.1
Potri.017G016200 Populus trichocarpa HOM05D001439 ORTHO05D002726 3.5e-06 56.6 159 28.9
DCAR_004044 Daucus carota HOM05D001439 ORTHO05D002726 4.6e-06 56.2 172 31.4
CiPaw.03G181600 Carya illinoinensis HOM05D001439 ORTHO05D002726 7.9e-06 55.5 149 30.9


User provided reference genes

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