Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.8e-88 328.6 162 100.0
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 8.1e-88 327.0 162 99.4
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 9.6e-81 303.5 162 90.1
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 5.8e-70 267.7 157 79.0
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 8.4e-69 263.8 162 77.8
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.0e-61 240.4 156 75.6
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.1e-60 236.9 162 71.6
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 5.5e-60 234.6 157 73.9
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 3.0e-58 228.8 161 70.8
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.9e-57 226.1 149 74.5
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 1.9e-57 226.1 159 71.7
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 7.4e-57 224.2 165 66.1
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.3e-56 223.4 159 71.1
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 4.8e-56 221.5 164 67.7
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.8e-56 221.5 159 70.4
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 4.8e-56 221.5 165 65.5
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 6.3e-56 221.1 149 73.2
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 6.3e-56 221.1 162 66.0
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 8.2e-56 220.7 162 67.9
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 1.8e-55 219.5 149 66.4
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.8e-55 219.5 165 65.5
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 2.4e-55 219.2 157 66.9
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 6.9e-55 217.6 161 65.2
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 9.0e-55 217.2 159 65.4
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.2e-54 216.9 163 66.9
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 1.2e-54 216.9 145 72.4
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.5e-54 216.5 152 70.4
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.5e-54 216.5 152 67.8
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 3.4e-54 215.3 152 69.1
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 4.5e-54 214.9 152 69.7
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 5.9e-54 214.5 162 63.6
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.0e-53 213.8 161 66.5
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 1.0e-53 213.8 142 72.5
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.0e-53 213.8 154 68.2
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.0e-53 213.8 148 69.6
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.0e-53 213.8 159 65.4
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 2.9e-53 212.2 155 69.0
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 2.9e-53 212.2 158 65.2
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 6.5e-53 211.1 149 65.8
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 6.5e-53 211.1 146 70.5
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 8.4e-53 210.7 141 72.3
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 8.4e-53 210.7 162 67.3
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 1.4e-52 209.9 159 63.5
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 1.4e-52 209.9 152 65.8
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.4e-52 209.9 157 62.4
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.9e-52 209.5 156 65.4
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 3.2e-52 208.8 149 65.1
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 3.2e-52 208.8 152 66.4
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 7.2e-52 207.6 147 66.7
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 7.2e-52 207.6 147 66.7
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 7.2e-52 207.6 155 67.7
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.2e-51 206.8 150 66.0
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.6e-51 206.5 147 66.7
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 2.1e-51 206.1 152 66.4
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 7.9e-51 204.1 147 63.3
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 7.9e-51 204.1 138 71.0
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 1.3e-50 203.4 147 63.9
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 2.3e-50 202.6 147 65.3
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 3.0e-50 202.2 147 63.9
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.1e-49 200.3 200 55.0
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.5e-49 199.9 152 66.4
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 2.5e-49 199.1 152 64.5
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 3.3e-49 198.7 159 63.5
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.3e-48 196.8 140 65.7
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 3.7e-48 195.3 139 68.3
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 6.3e-48 194.5 193 56.5
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.1e-47 193.7 157 61.1
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 3.1e-47 192.2 158 64.6
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 4.1e-47 191.8 156 60.9
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 6.9e-47 191.0 139 65.5
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 9.0e-47 190.7 139 66.9
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 2.0e-46 189.5 153 62.7
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 4.5e-46 188.3 141 65.2
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.7e-45 186.4 147 62.6
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.2e-45 186.0 141 64.5
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 2.2e-45 186.0 157 59.2
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 9.4e-44 180.6 144 64.6
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 2.7e-43 179.1 147 61.9
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 1.4e-42 176.8 151 58.3
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.4e-42 176.8 138 60.9
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 2.3e-42 176.0 144 56.2
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 3.0e-42 175.6 169 50.9
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 2.0e-41 172.9 152 57.2
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 1.3e-32 143.7 131 52.7
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 6.3e-32 141.4 109 57.8
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.7e-29 133.3 155 47.1
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 2.6e-25 119.4 150 42.0
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 3.7e-24 115.5 78 74.4
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 1.4e-23 113.6 140 42.1
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 5.9e-22 108.2 90 56.7
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 5.5e-20 101.7 96 55.2
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 2.8e-16 89.4 112 44.6
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 2.4e-15 86.3 112 43.8
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.1e-15 85.9 78 55.1
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 1.1e-12 77.4 103 39.8
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.5e-12 77.0 60 58.3
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 3.4e-09 65.9 59 54.2
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 3.1e-07 59.3 69 46.4


User provided reference genes

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