Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g06680 Fragaria vesca HOM05D030384 ORTHO05D002689 4.7e-61 237.7 119 100.0
FAN12G3444 Fragaria x ananassa HOM05D030384 ORTHO05D002689 4.7e-61 237.7 119 100.0
FAN17G2389 Fragaria x ananassa HOM05D030384 ORTHO05D002689 3.0e-47 191.8 95 100.0
FAN22G1225 Fragaria x ananassa HOM05D002570 ORTHO05D002689 6.9e-28 127.5 61 100.0
FAN07G1393 Fragaria x ananassa HOM05D030384 ORTHO05D002689 1.4e-25 119.8 61 100.0
Prupe.1G069600 Prunus persica HOM05D002570 ORTHO05D002689 5.7e-22 107.8 99 63.6
Dinv25488 Davidia involucrata HOM05D002570 ORTHO05D002689 3.0e-15 85.5 93 51.6
Potri.006G070200 Populus trichocarpa HOM05D002570 ORTHO05D002689 8.8e-15 84.0 99 48.5
Sabra06G0052300 Salix brachista HOM05D002570 ORTHO05D002689 5.7e-14 81.3 99 46.5
Cfa013397 Carpinus fangiana HOM05D002570 ORTHO05D002689 2.2e-13 79.3 92 50.0
Potri.018G131900 Populus trichocarpa HOM05D002570 ORTHO05D002689 2.8e-13 79.0 90 48.9
Psat4g014680 Pisum sativum HOM05D002570 ORTHO05D002689 1.1e-12 77.0 98 49.0
arahy.Tifrunner.gnm1.ann1.ANT7GU Arachis hypogaea HOM05D002570 ORTHO05D002689 6.9e-12 74.3 61 60.7
Duzib251G0386 Durio zibethinus HOM05D002570 ORTHO05D002689 9.1e-12 73.9 94 47.9
Lj4g0013925 Lotus japonicus HOM05D002570 ORTHO05D002689 1.2e-11 73.6 102 46.1
VMungo1215G3302 Vigna mungo HOM05D002570 ORTHO05D002689 3.4e-11 72.0 97 45.4
arahy.Tifrunner.gnm1.ann1.G00P8D Arachis hypogaea HOM05D002570 ORTHO05D002689 4.5e-11 71.6 82 51.2
TPR.G27566 Trifolium pratense HOM05D002570 ORTHO05D002689 1.0e-10 70.5 104 43.3
Glyma.17G055600 Glycine max HOM05D002570 ORTHO05D002689 3.8e-10 68.6 93 46.2
Medtr4g126400 Medicago truncatula HOM05D002570 ORTHO05D002689 3.8e-10 68.6 99 45.5
Lalb_Chr12g0199761 Lupinus albus HOM05D002570 ORTHO05D002689 5.0e-10 68.2 95 42.1
Phvul.003G137400 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 5.0e-10 68.2 76 50.0
Gohir.D12G159000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.1e-09 67.0 78 48.7
Gohir.A12G155900 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.4e-09 66.6 83 47.0
Gorai.008G172100 Gossypium raimondii HOM05D002570 ORTHO05D002689 4.2e-09 65.1 78 48.7
Glyma.13G371800 Glycine max HOM05D002570 ORTHO05D002689 2.7e-08 62.4 63 57.1
Glyma.15G001900 Glycine max HOM05D002570 ORTHO05D002689 2.7e-08 62.4 86 47.7
Ciclev10010203m.g Citrus clementina HOM05D002570 ORTHO05D002689 3.6e-08 62.0 89 42.7
vmacro19088 Vaccinium macrocarpon HOM05D002570 ORTHO05D002689 3.6e-08 62.0 70 48.6
Rhsim08G0200900 Rhododendron simsii HOM05D002570 ORTHO05D002689 6.1e-08 61.2 70 48.6
Oeu036442.1 Olea europaea HOM05D002570 ORTHO05D002689 7.9e-08 60.8 75 46.7
Dinv13685 Davidia involucrata HOM05D002570 ORTHO05D002689 1.0e-07 60.5 93 44.1
Dinv21443 Davidia involucrata HOM05D002570 ORTHO05D002689 1.0e-07 60.5 93 44.1
Migut.D01154 Erythranthe guttata HOM05D002570 ORTHO05D002689 1.0e-07 60.5 72 47.2
Hma1.2p1_1208F.1_g267175 Hydrangea macrophylla HOM05D002570 ORTHO05D002689 1.4e-07 60.1 83 43.4
Medtr2g105430 Medicago truncatula HOM05D002570 ORTHO05D002689 1.4e-07 60.1 63 50.8
Phvul.005G184200 Phaseolus vulgaris HOM05D002570 ORTHO05D002689 1.4e-07 60.1 66 50.0
Thecc.02G311400 Theobroma cacao HOM05D002570 ORTHO05D002689 1.4e-07 60.1 59 52.5
TWI60G0727 Tripterygium wilfordii HOM05D002570 ORTHO05D002689 1.4e-07 60.1 77 42.9
MBI14_g19442_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 1.8e-07 59.7 71 45.1
MD09G1230400 Malus domestica HOM05D002570 ORTHO05D002689 1.8e-07 59.7 84 42.9
SalBow1G2645 Salvia bowleyana HOM05D002570 ORTHO05D002689 1.8e-07 59.7 82 47.6
Cc04_g05480 Coffea canephora HOM05D002570 ORTHO05D002689 2.3e-07 59.3 70 48.6
MBI16_g27293_MAGBIO Magnolia biondii HOM05D002570 ORTHO05D002689 2.3e-07 59.3 113 36.3
MSTRG.22832 Avicennia marina HOM05D002570 ORTHO05D002689 3.0e-07 58.9 70 47.1
Lsat_1_v5_gn_1_30640 Lactuca sativa HOM05D002570 ORTHO05D002689 3.0e-07 58.9 108 33.3
Actinidia08926 Actinidia chinensis HOM05D002570 ORTHO05D002689 3.9e-07 58.5 93 41.9
HanXRQChr02g0033781 Helianthus annuus HOM05D002570 ORTHO05D002689 3.9e-07 58.5 70 45.7
MD17G1229300 Malus domestica HOM05D002570 ORTHO05D002689 3.9e-07 58.5 94 42.6
Peaxi162Scf00314g00938 Petunia axillaris HOM05D002570 ORTHO05D002689 3.9e-07 58.5 92 42.4
COL.COLO4_30895 Corchorus olitorius HOM05D002570 ORTHO05D002689 5.1e-07 58.2 88 44.3
Thecc.06G132900 Theobroma cacao HOM05D002570 ORTHO05D002689 5.1e-07 58.2 93 43.0
CiPaw.01G051100 Carya illinoinensis HOM05D002570 ORTHO05D002689 6.7e-07 57.8 61 52.5
Ciclev10026849m.g Citrus clementina HOM05D002570 ORTHO05D002689 6.7e-07 57.8 86 43.0
HanXRQChr04g0099961 Helianthus annuus HOM05D002570 ORTHO05D002689 6.7e-07 57.8 60 48.3
Actinidia18273 Actinidia chinensis HOM05D002570 ORTHO05D002689 8.8e-07 57.4 71 42.3
Glyma.13G103400 Glycine max HOM05D002570 ORTHO05D002689 8.8e-07 57.4 100 40.0
Solyc03g117840.4 Solanum lycopersicum HOM05D002570 ORTHO05D002689 8.8e-07 57.4 69 49.3
PGSC0003DMG400014220 Solanum tuberosum HOM05D002570 ORTHO05D002689 8.8e-07 57.4 69 49.3
TAR383G0799 Trochodendron aralioides HOM05D002570 ORTHO05D002689 1.1e-06 57.0 79 40.5
MSTRG.11212 Avicennia marina HOM05D002570 ORTHO05D002689 1.5e-06 56.6 70 44.3
CANSAT64G2315 Cannabis sativa HOM05D002570 ORTHO05D002689 1.5e-06 56.6 82 41.5
FvH4_6g28000 Fragaria vesca HOM05D002570 ORTHO05D002689 1.5e-06 56.6 56 57.1
FAN02G4288 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.5e-06 56.6 59 54.2
FAN05G0139 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.5e-06 56.6 59 54.2
FAN05G5383 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.5e-06 56.6 59 54.2
FAN14G4539 Fragaria x ananassa HOM05D002570 ORTHO05D002689 1.5e-06 56.6 56 57.1
Gohir.A05G143000 Gossypium hirsutum HOM05D002570 ORTHO05D002689 1.5e-06 56.6 94 40.4
RcHm_v2.0_Chr2g0131671 Rosa chinensis HOM05D002570 ORTHO05D002689 1.5e-06 56.6 59 54.2
CSS0011601 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 2.0e-06 56.2 67 46.3
CSS0038527 Camellia sinensis var. sinensis HOM05D002570 ORTHO05D002689 2.0e-06 56.2 67 46.3
Manes.11G071400 Manihot esculenta HOM05D002570 ORTHO05D002689 2.0e-06 56.2 88 39.8
Prupe.3G106900 Prunus persica HOM05D002570 ORTHO05D002689 2.0e-06 56.2 86 43.0
Sopen03g036750 Solanum pennellii HOM05D002570 ORTHO05D002689 2.0e-06 56.2 92 41.3
Nn8g40408 Nelumbo nucifera HOM05D002570 ORTHO05D002689 2.6e-06 55.8 88 39.8
Oeu012866.1 Olea europaea HOM05D002570 ORTHO05D002689 2.6e-06 55.8 70 48.6
CAN.G1008.23 Capsicum annuum HOM05D002570 ORTHO05D002689 3.3e-06 55.5 69 47.8
ECA247G0437 Erigeron canadensis HOM05D005398 ORTHO05D000476 3.3e-06 55.5 70 47.1
Duzib192G0671 Durio zibethinus HOM05D002570 ORTHO05D002689 4.4e-06 55.1 81 43.2
Nitab4.5_0004194g0090 Nicotiana tabacum HOM05D002570 ORTHO05D002689 4.4e-06 55.1 92 38.0
Nitab4.5_0007293g0020 Nicotiana tabacum HOM05D002570 ORTHO05D002689 4.4e-06 55.1 92 38.0
Psat5g308160 Pisum sativum HOM05D002570 ORTHO05D002689 4.4e-06 55.1 63 46.0
PGR102G1262 Punica granatum HOM05D002570 ORTHO05D002689 4.4e-06 55.1 93 41.9
Zm00001eb067680 Zea mays HOM05D002570 ORTHO05D002689 4.4e-06 55.1 75 41.3
FAN09G2432 Fragaria x ananassa HOM05D002570 ORTHO05D002689 5.7e-06 54.7 59 52.5
Gohir.D05G145400 Gossypium hirsutum HOM05D002570 ORTHO05D002689 5.7e-06 54.7 94 38.3
Gorai.009G149300 Gossypium raimondii HOM05D002570 ORTHO05D002689 5.7e-06 54.7 94 38.3
Lj3g0002113 Lotus japonicus HOM05D002570 ORTHO05D002689 5.7e-06 54.7 80 42.5
QL05p081283 Quercus lobata HOM05D002570 ORTHO05D002689 7.4e-06 54.3 90 41.1
Oeu033446.1 Olea europaea HOM05D002570 ORTHO05D002689 9.7e-06 53.9 72 44.4
Sed0009460 Sechium edule HOM05D002570 ORTHO05D002689 9.7e-06 53.9 86 36.0


User provided reference genes

Program Settings