Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 6.5e-159 563.9 268 100.0
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 2.8e-130 468.8 262 88.2
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.9e-126 456.1 264 85.2
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 4.3e-126 454.9 264 84.8
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 3.4e-123 445.3 262 84.4
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 1.6e-117 426.4 261 80.8
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 1.1e-92 344.0 294 61.9
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 3.5e-80 302.4 191 72.8
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 3.0e-79 299.3 194 73.2
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 6.7e-79 298.1 189 75.1
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 8.7e-79 297.7 226 64.6
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 1.1e-78 297.4 195 71.3
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 2.1e-77 293.1 220 66.4
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 2.8e-77 292.7 206 68.4
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 6.2e-77 291.6 190 72.6
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 1.1e-76 290.8 222 63.5
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 1.8e-76 290.0 222 63.5
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 1.8e-76 290.0 153 88.2
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 5.3e-76 288.5 195 69.7
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 1.2e-75 287.3 232 61.6
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 1.2e-75 287.3 196 70.4
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 2.9e-74 282.7 201 68.7
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 2.9e-74 282.7 196 70.4
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 2.9e-74 282.7 193 69.9
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 4.2e-73 278.9 213 64.8
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 2.1e-72 276.6 195 68.7
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 7.9e-72 274.6 196 68.9
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 1.3e-71 273.9 188 69.1
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 2.3e-71 273.1 193 67.9
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 4.8e-69 265.4 229 60.3
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 1.4e-68 263.8 186 67.2
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 1.2e-67 260.8 193 66.8
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 1.2e-67 260.8 215 62.8
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 1.7e-66 256.9 188 64.9
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 1.9e-65 253.4 173 67.6
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 2.7e-64 249.6 201 60.7
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 1.8e-63 246.9 176 68.2
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 6.7e-63 245.0 221 54.3
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 7.4e-62 241.5 157 70.1
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 1.6e-61 240.4 167 69.5
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 1.2e-59 234.2 213 55.4
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 6.5e-58 228.4 162 66.0
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 7.9e-56 221.5 186 60.8
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 2.4e-52 209.9 147 72.1
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 3.8e-50 202.6 120 76.7
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 3.6e-48 196.1 192 50.0
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 1.3e-45 187.6 130 68.5
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 1.2e-43 181.0 136 62.5
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 2.0e-43 180.3 197 48.7
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 3.6e-40 169.5 156 52.6
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 1.1e-38 164.5 116 62.1
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 1.8e-28 130.6 97 62.9
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 7.2e-25 118.6 74 70.3
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 4.7e-24 115.9 116 46.6
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 4.5e-19 99.4 62 74.2
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 1.3e-18 97.8 76 61.8
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 2.0e-14 84.0 52 73.1
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 2.0e-14 84.0 181 34.8
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 1.5e-09 67.8 153 30.7
Sabra15G0023300 Salix brachista HOM05D001936 ORTHO05D002296 1.2e-08 64.7 69 50.7


User provided reference genes

Program Settings