Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_3g40830 Fragaria vesca HOM05D016692 ORTHO05D010482 5.9e-141 504.2 257 100.0
FAN11G0742 Fragaria x ananassa HOM05D016692 ORTHO05D010482 1.9e-139 499.2 257 99.2
FAN21G3878 Fragaria x ananassa HOM05D016692 ORTHO05D010482 3.6e-138 495.0 257 98.1
FAN25G0531 Fragaria x ananassa HOM05D000033 ORTHO05D000913 6.1e-138 494.2 257 98.1
RcHm_v2.0_Chr5g0073561 Rosa chinensis HOM05D016692 ORTHO05D010482 1.9e-107 392.9 257 78.6
Prupe.6G039500 Prunus persica HOM05D016692 ORTHO05D010482 4.0e-73 278.9 255 60.0
MD11G1051900 Malus domestica HOM05D016692 ORTHO05D010482 4.6e-69 265.4 242 57.4
MD03G1049700 Malus domestica HOM05D016692 ORTHO05D010482 2.4e-62 243.0 246 55.3
FAN16G0804 Fragaria x ananassa HOM05D016692 ORTHO05D010482 2.1e-53 213.4 110 97.3
Lj6g0010191 Lotus japonicus HOM05D008517 ORTHO05D010482 2.8e-26 123.2 243 29.2
MELO3C020481.2 Cucumis melo HOM05D008517 ORTHO05D010482 4.8e-26 122.5 236 33.1
ClCG03G000030 Citrullus lanatus HOM05D008517 ORTHO05D010482 6.3e-26 122.1 237 32.9
Lalb_Chr15g0085691 Lupinus albus HOM05D008517 ORTHO05D010482 1.7e-23 114.0 255 28.6
TPR.G13887 Trifolium pratense HOM05D008517 ORTHO05D010482 8.5e-23 111.7 251 27.9
Ca_15071_v3 Cicer arietinum L. HOM05D008517 ORTHO05D010482 3.2e-22 109.8 244 28.7
VMungo0540G2173 Vigna mungo HOM05D008517 ORTHO05D010482 4.6e-21 105.9 244 27.5
Psat5g147520 Pisum sativum HOM05D008517 ORTHO05D010482 6.1e-21 105.5 192 28.6
Medtr3g062470 Medicago truncatula HOM05D008517 ORTHO05D010482 7.9e-21 105.1 242 28.5
Phvul.006G080100 Phaseolus vulgaris HOM05D008517 ORTHO05D010482 3.3e-19 99.8 245 26.5
Dinv12288 Davidia involucrata HOM05D008517 ORTHO05D010482 1.3e-18 97.8 251 29.5
Cpa.g.sc2.275 Carica papaya HOM05D008517 ORTHO05D010482 4.5e-16 89.4 203 29.1
Atru.chr10.2344 Acer truncatum HOM05D008517 ORTHO05D010482 2.2e-15 87.0 250 24.8
PGR119G1844 Punica granatum HOM05D008517 ORTHO05D010482 8.5e-15 85.1 194 27.8
BcaC02g08016 Brassica carinata HOM05D008517 ORTHO05D010482 2.5e-14 83.6 190 29.5
A04p23240 Brassica napus HOM05D008517 ORTHO05D010482 2.5e-14 83.6 190 28.9
C04p59390 Brassica napus HOM05D008517 ORTHO05D010482 2.5e-14 83.6 190 29.5
BolC4t27447H Brassica oleracea HOM05D008517 ORTHO05D010482 2.5e-14 83.6 190 29.5
Glyma.18G051200 Glycine max HOM05D008517 ORTHO05D010482 2.5e-14 83.6 159 29.6
BraA04t17851Z Brassica rapa HOM05D008517 ORTHO05D010482 3.2e-14 83.2 190 28.9
Actinidia23156 Actinidia chinensis HOM05D000033 ORTHO05D000913 4.2e-14 82.8 187 28.9
BcaB06g28372 Brassica carinata HOM05D008517 ORTHO05D010482 7.2e-14 82.0 255 27.1
Eucgr.J01845 Eucalyptus grandis HOM05D008517 ORTHO05D010482 7.2e-14 82.0 259 25.1
Glyma.11G199600 Glycine max HOM05D008517 ORTHO05D010482 1.2e-13 81.3 235 27.2
Sp4g13060 Schrenkiella parvula HOM05D008517 ORTHO05D010482 2.7e-13 80.1 256 28.1
BcaB02g10328 Brassica carinata HOM05D008517 ORTHO05D010482 3.6e-13 79.7 204 27.0
CSS0018299 Camellia sinensis var. sinensis HOM05D008517 ORTHO05D010482 6.1e-13 79.0 245 28.2
Manes.02G211300 Manihot esculenta HOM05D008517 ORTHO05D010482 7.9e-13 78.6 165 27.3
Carub.0004s1167 Capsella rubella HOM05D008517 ORTHO05D010482 1.0e-12 78.2 248 27.0
CARHR123960 Cardamine hirsuta HOM05D008517 ORTHO05D010482 2.3e-12 77.0 190 28.4
HanXRQChr06g0182401 Helianthus annuus HOM05D008517 ORTHO05D010482 2.3e-12 77.0 188 26.6
Lsat_1_v5_gn_8_99661 Lactuca sativa HOM05D008517 ORTHO05D010482 9.7e-11 71.6 176 30.7
AT2G30505 Arabidopsis thaliana HOM05D008517 ORTHO05D010482 8.2e-10 68.6 251 27.1
Thhalv10016822m.g Eutrema salsugineum HOM05D008517 ORTHO05D010482 3.1e-09 66.6 249 25.7
Rhsim13G0058200 Rhododendron simsii HOM05D008517 ORTHO05D010482 4.1e-09 66.2 200 23.5
AL4G25390 Arabidopsis lyrata HOM05D008517 ORTHO05D010482 5.3e-09 65.9 251 26.7
TAR383G0516 Trochodendron aralioides HOM05D002137 ORTHO05D002144 9.1e-09 65.1 196 25.5
Aa31LG5G6260 Aethionema arabicum HOM05D008517 ORTHO05D010482 5.9e-08 62.4 162 25.3
CiPaw.02G139800 Carya illinoinensis HOM05D002137 ORTHO05D002144 5.5e-06 55.8 181 24.9


User provided reference genes

Program Settings